Streptomonospora litoralis: EKD16_18670
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Entry
EKD16_18670 CDS
T05863
Symbol
pel
Name
(GenBank) Pectate lyase precursor
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
strr
Streptomonospora litoralis
Pathway
strr00040
Pentose and glucuronate interconversions
strr01100
Metabolic pathways
strr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
strr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
EKD16_18670 (pel)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EKD16_18670 (pel)
Enzymes [BR:
strr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
EKD16_18670 (pel)
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
POT1
Motif
Other DBs
NCBI-ProteinID:
QBI55497
UniProt:
A0A4P6Q8Z2
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All DBs
Position
4336948..4338279
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AA seq
443 aa
AA seq
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MNRAAGLLATAAGAALVATALPAAADAGHGHGGHHGRGGDHGHHDRDLGRETLGDRDGWG
AAEGGTTGGSAADADHVYTVDTWAGLQEAVQGDEPKIVYVEGDISAMTDADGDSLSCTDF
NDPGYSWQEYVATYDPDAGWEGEASGPLEEARERSYDAHRSHVMLRPGSNTTIVGLGDAS
ISDGFVLLESVENVILRNLGIHDAYDCFPSWDGEAWDAQYDNIEVSRTEHVWLDHLTVSD
GGNYDSGFPVIHGQRVEHHDGLLDVVRASDMVTISWNRLDAHDKTMLIGNTDSDRYDEWD
KLRVTVHHNRFSNVTQRAPRVRYGQVHVYNNLYTHSADSPYDYQYSLGAGVESHIYAENN
FFFMRGGIAAGEVIQSWRGTAIHEEGSVFNGRRTDLLAAYNAANPDATLAEDTSWTPSLH
RRVHPTWAVPALVHAKAGAGEAR
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
gtgaacagagcagccggtctcctggccaccgccgccggtgcggcgctggtggccaccgca
ctacccgcagccgccgacgccggccacggccacggcggccaccacggtcgcggcggcgat
cacggacaccacgaccgcgacctggggcgcgagacgctgggcgaccgcgacggctggggc
gccgccgagggcgggaccacaggcggatccgcggccgacgccgaccacgtctacaccgtc
gacacctgggccgggctgcaggaggccgtccagggcgacgagcccaagatcgtctacgtc
gagggcgacatcagcgccatgaccgacgccgacggcgactccctctcctgcaccgacttc
aacgaccccggctacagctggcaggagtacgtcgccacctacgaccccgacgccggctgg
gagggcgaggcgtccgggccgctggaggaggcccgcgagcgctcctacgacgcccaccgc
tcgcatgtgatgctgcggcccggctccaacaccaccatcgtcggcctgggcgacgcctcg
atcagcgacggcttcgtcctgctggagagcgtggagaacgtcatcctgcgcaacctcggc
atccacgacgcctacgactgcttcccctcctgggacggcgaggcgtgggacgcccagtac
gacaacatcgaggtctcccgcaccgagcacgtctggctcgaccacctcaccgtctccgac
ggcggcaactacgacagcggattcccggtgatccacggacagcgcgtcgagcaccacgac
ggcctgctcgatgtggtgcgcgccagcgacatggtgacgatctcctggaaccggctggac
gcccacgacaagacgatgctgatcggcaacaccgacagcgaccgctacgacgagtgggac
aagctgcgcgtcacggtgcaccacaaccgcttcagcaacgtcacccagcgcgcaccgcgg
gtgcggtacggccaggtacacgtctacaacaacctctacacccactcggcggactcgccg
tacgactaccagtactccctgggtgcgggcgtggagtcccacatctacgcggagaacaac
ttcttcttcatgcgcggcggcatcgccgccggcgaggtgatccagtcctggcgcggcacc
gccatccacgaggagggcagcgtcttcaacggccgccgcacggacctgctggccgcctac
aacgccgcgaaccccgacgccacgctcgccgaggacaccagctggaccccgtcgctgcac
cgccgcgtgcatcccacgtgggcggtcccggcgctggtccacgccaaggccggtgcgggc
gaggcccggtag
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