Streptomonospora litoralis: EKD16_19950
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Entry
EKD16_19950 CDS
T05863
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
strr
Streptomonospora litoralis
Pathway
strr03030
DNA replication
strr03430
Mismatch repair
strr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
strr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EKD16_19950 (polC)
03430 Mismatch repair
EKD16_19950 (polC)
03440 Homologous recombination
EKD16_19950 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
strr03032
]
EKD16_19950 (polC)
03400 DNA repair and recombination proteins [BR:
strr03400
]
EKD16_19950 (polC)
Enzymes [BR:
strr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EKD16_19950 (polC)
DNA replication proteins [BR:
strr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EKD16_19950 (polC)
DNA repair and recombination proteins [BR:
strr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EKD16_19950 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QBI55753
UniProt:
A0A4P6Q570
LinkDB
All DBs
Position
complement(4640412..4641359)
Genome browser
AA seq
315 aa
AA seq
DB search
MDDVLDAEPDAGRVVRMGTLTRRRGSARSARDLEYAVVDVETTGLYPGEGARICEIAVVR
MRGDGTLLREFSTLVDPGVPITGQEFHGIGASDVVGAPKASELVGVLRGLFSGAVLAGHK
LDFEGRFLASELLPAGLPGELPGLCTLLALRAQVDLPRYSLPRACHTLSGHWPTGQHTAL
GDARACAQLLAELLTNAPGTLRYTGPDPMRLKSAEPDFAGLKPRTAHASAASSVALRRHP
ERPPVSWPSRWRRLELDPRDCVGRFTTEQRAAAQRQAECRSAYRDAAAASAALTSALAAT
SAARLLARRLRSALA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgtgctggacgccgaaccggacgccgggcgggtggtccgaatggggaccctg
acccgccgccgcgggtcggcccgcagcgcgcgcgacctcgaatacgccgtggtggacgtg
gagaccaccggcctctaccccggtgagggggcgcggatctgcgagatcgccgtggtgcgg
atgcgcggcgacggcacgctcctccgggagttcagcaccctcgtcgacccgggcgtcccg
atcacggggcaggagttccacggtatcggcgccagcgacgtcgtcggggcgcccaaggcg
tccgagctggtcggggtgctccgcgggctgttctccggcgcggtgctggccgggcacaag
ctcgacttcgaaggccggttcctggcctcggagctgctgcccgccggactgcccggcgag
cttcccggcctgtgcaccctgctcgcgctgcgcgcccaggtggatctgccccgctattcg
ctgccgcgcgcctgccacaccctcagcggccactggcccaccggccagcacacggcgctg
ggcgacgcccgcgcgtgtgcgcagctgctcgccgagctgctgaccaacgcgccgggaacg
ctgcgctataccgggcccgatcccatgcggctgaaatccgccgaaccggatttcgccgga
ctgaaaccccgtaccgcgcacgcctccgcagcgtcttcagtcgcgctgcgccgccacccc
gagcgcccgcccgtgtcctggccctcccgctggcgccgactggagctggacccgcgcgac
tgcgtgggccgcttcaccaccgagcagcgcgcggccgctcagcgccaagcggagtgccgc
agcgcctaccgcgacgccgcggccgcctcggcggcgctgaccagcgcgctggccgccacg
agtgctgcgcggctgctggcgcgtcggctgcgctcggcactggcctga
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