Streptomonospora litoralis: EKD16_20890
Help
Entry
EKD16_20890 CDS
T05863
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
strr
Streptomonospora litoralis
Pathway
strr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
strr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EKD16_20890 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strr03021
]
EKD16_20890 (rpoA)
03400 DNA repair and recombination proteins [BR:
strr03400
]
EKD16_20890 (rpoA)
Enzymes [BR:
strr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EKD16_20890 (rpoA)
Transcription machinery [BR:
strr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EKD16_20890 (rpoA)
DNA repair and recombination proteins [BR:
strr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EKD16_20890 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QBI55937
UniProt:
A0A4P6Q9W6
LinkDB
All DBs
Position
complement(4851850..4852869)
Genome browser
AA seq
339 aa
AA seq
DB search
MLIAQRPTLSEESLGEFRSKFVVEPLEPGFGYTIGNSLRRTLLSSIPGAAVTSIRIEGVE
HEFTTVPGVKEDVTELILNLKGLVISSEHDEPVLMYLRKQGPGVVTAADIAPPAGVEVHN
PDLHIATLNGKGKLEMELTVERGRGYVSATQNKQQGQEIGRIPVDSIYSPVLRVTYKVEA
TRVEQRTDFDRLIVDIETKPSIRPRDAVASAGKTLVELFGLARELNVDAEGIDMGPSPTD
AALAADLALPIEDLNLTVRSYNCLKREGIHSVGELVARSEQDLLDIRNFGAKSIEEVKQK
LIDMGLSLKDSPPGFDPSTAADSYGSEDEDEAFVETEQY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgttgatcgctcagcgtccgacgctctccgaggagtccctcggcgagttccgctccaag
ttcgtcgtcgaaccgctggagccgggattcggttacacgatcggcaactcgcttcgccgc
actctgctgtcctccattccgggggcagcggtcaccagcatccgcatcgagggcgtcgag
cacgagttcaccaccgtgcccggcgtcaaggaggatgtcaccgagctcatcctcaacctc
aagggcctggtcatcagttccgagcacgacgagccggtgctgatgtacctgcgcaagcag
ggcccgggtgtggtcaccgccgccgacatcgctccgccggcgggtgtcgaggtgcacaac
cccgacctgcacatcgcgaccctgaacggcaagggcaagctggagatggagctgacggtc
gagcgcggccgcggctacgtctcggcgacgcagaacaagcagcagggccaggagatcggt
cgcatcccggtcgactcgatctactcgccggtgctgcgggtcacctacaaggtcgaggcc
acgcgtgtcgagcagcgcaccgacttcgaccggctgatcgtcgacatcgagaccaagccg
agcatccgtccgcgcgacgccgtcgccagtgcgggcaagaccctggtcgagctgttcggc
ctggcgcgcgagctcaacgtcgacgccgagggcatcgacatgggcccgtcgccgacggac
gccgccctggccgccgatctggccctgcccatcgaggacctcaacctcacggtccggtcc
tacaactgcctcaagcgcgagggcatccacagcgtcggcgagctcgtcgcccgctccgag
caggaccttctcgatataaggaatttcggcgcgaagtccatcgaagaggtcaagcagaag
ctcatcgacatgggcctgtccctgaaggactccccgcccggattcgacccgagcaccgcg
gccgactcctacggctccgaggacgaggacgaggccttcgtcgagaccgagcagtactag
DBGET
integrated database retrieval system
