Streptomonospora litoralis: EKD16_23905
Help
Entry
EKD16_23905 CDS
T05863
Name
(GenBank) RNA polymerase sigma factor
Organism
strr
Streptomonospora litoralis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC2
Sigma70_r2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QBI56527
UniProt:
A0A4P6QAZ9
LinkDB
All DBs
Position
complement(5486946..5488820)
Genome browser
AA seq
624 aa
AA seq
DB search
MTEPHVDYEERLVGDNELLARVREGDSGAFAELYTRHAGSARGLARQLVRSESEVDDAVA
ETFARVLGVLGRGGGPVDGFRPYLLTALRHVVYDRYRGEKRQVVTDDMESFDSGEPFVDP
ALAGLERSLIARAYLSLPERWQAVLWYTEIEGAKPAEAAPGLGMNPNSVAALAYRAREGL
RQAYLQMHLADGAAESCRPAVSRLGAYIRGGLAKRDTAAVDRHLDQCGDCREVCAELTDV
NAGLRGIVLPLVAGPAAAAYLAAAGAVPFGIGGWWQRLPKRGQQAAAGGTAAAAVAAAVA
FALVSNETPAPPRPEAPPAAAAQPAQPPPPAAPEQPPSEPEPPAPAAPPAVERAASAPAP
EPEPRSDEPAPEAPPPPERQSASPSEPPPSPRPPEPPTEPPPEPRPEPEVEISVGPQGVS
VRGPSTDVRVGAGGVSVRDADGGVQVGHGGVSVRGPGADVQVGAGGVSVPLPSEAGGAGA
SPQPTPELATDAPGGGAAAAEVRSRPGSAPPSRGRRRRRIRSSAGGPVRARGRRAHAASA
RPSAALPGPARRFGAALVAWRDSYSPSDRGWRGGIQTPADLVRLWRVLSTGPVPNTGRTR
CVILAPGYEPTGRGGVAWIAARYS
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaccccatgtcgactacgaagagcgactcgtcggtgacaacgagctgctcgcg
cgggtccgcgaaggcgacagcggagcattcgccgagctctacacccgccacgccggctcg
gcccgcgggctggcccgccagctggtccgcagcgagagcgaggtggacgacgccgtcgcc
gagacgttcgcgcgcgtgctcggggtgctaggccgcggcggcggtcccgtggacggtttc
cgtccctatctgctgaccgcgctgcgccacgtcgtctacgaccggtaccgcggcgagaag
cgtcaggtcgtcaccgacgacatggagagtttcgactccggcgaacccttcgtcgacccg
gccttggccggcctggagcgctcgctcatcgcgcgcgcctacctctctctgcccgagcgc
tggcaggcggtgctctggtacaccgagatcgaaggggccaagcccgccgaggcggcgccc
ggcctggggatgaatcccaacagcgtggcggcgctggcctaccgggctcgcgagggactt
cgccaggcgtatctgcagatgcacctggccgacggcgcggcggagtcctgccgtccggct
gtgagcaggctcggcgcctacatccgcggcggtctggccaagcgcgacaccgcggccgtc
gaccgccacctcgaccagtgcggcgactgccgcgaggtctgcgccgagctgacggacgtc
aacgccgggctgcgcgggatcgtgctcccgctggtcgcgggtccggccgcggcggcctac
ctcgcagcggccggggccgtgccgttcggcatcggcggctggtggcagcggctgcccaag
cgcggccagcaggccgcggcgggcggcaccgcggctgcggcggtcgcggcggccgtcgcg
ttcgcgctggtgagcaacgagacaccggcaccgccgcggccggaggcgcctccggcggct
gccgcccagcccgcccagccccctcctcccgccgcccccgaacagccgccctccgagccg
gaaccgcccgctcccgccgctccgcctgccgtcgaacgggcggcatcagcaccggccccg
gagccggagccgcgctcagacgagcccgcacccgaggcacccccgccgcccgagcggcag
tcggcctcgccgtctgagccaccgccgtcgccccgccctccggagccgcccactgaaccg
ccgcctgaaccgcggcccgaacccgaggtggagatcagcgtcggtccgcaaggcgtgtcg
gtgcggggaccgagcacagacgtccgggtcggcgccggcggggtgtcggtgcgggacgcg
gacggtggtgtccaggtcggccacggcggcgtctcggtgcggggaccgggcgcagacgtt
caggtcggcgccggcggggtgtcggtgcccctcccgagcgaggccgggggcgccggcgcg
tccccgcaaccgacgcccgagctagcgactgatgcgcccggcggcggcgccgcggccgcg
gaagtccgctcgcggccgggttccgcgccgccctcccgcggccgccggcgccgccgtatc
cgttcgtccgcgggcggcccggtccgagcccgcggccgccgcgcacacgccgcgtctgcg
cgtccctccgcggccctgccggggcccgcccggcggttcggcgcagcgcttgtggcctgg
cgcgattcgtattcgccgagcgaccgcgggtggcgaggcggcatacaaaccccggcagac
ttggttaggctgtggcgcgtcctgtctacaggcccagtgccgaacaccggcaggacccgg
tgcgtgattctcgccccgggctacgaaccaacgggaaggggcggtgtcgcgtggatcgct
gcgcgctattcgtag
DBGET
integrated database retrieval system
