Streptomyces sp. SAT1: A8713_02340
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Entry
A8713_02340 CDS
T04706
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
strt
Streptomyces sp. SAT1
Brite
KEGG Orthology (KO) [BR:
strt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strt03021
]
A8713_02340
Transcription machinery [BR:
strt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A8713_02340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_3
HTH_Crp_2
DUF7343
HTH_37
Sigma70_ECF
GerE
HTH_28
HTH_15
HTH_31
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ANH90116
UniProt:
A0A1A9IRE5
LinkDB
All DBs
Position
569495..570286
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AA seq
263 aa
AA seq
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MRTTGRTKSHPHDDAPDTAAAFERLAGLPAGAERKALRDELVQVWLPMAERIAVRFRGRG
EALEDLYQVAALGLVKAVDHYDPARGYAFEAYAVPTVTGEIKRHFRDHMWTLHVPRRVQD
LRNRVRRAAKELAQTTPGRSPTVAEIAEYTDLSVEDVRTGMEALDCFAALSLEAEVPGTD
GYALGDGLGEADARYDLVVDRVAVRPCLQALPERERMILYLRFFRGMTQSRIAQQLGISQ
MHVSRLLSGCFAQLREELLAEAG
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaccaccggcagaacgaagtcccacccgcacgacgacgcccccgacacggcggcg
gccttcgagcggctcgcgggactgcccgcgggagcggagcgcaaggcgctgcgcgacgag
ctggtccaggtgtggctgccgatggccgagcggatcgcggtccgcttccggggccgcggc
gaggcactggaggatctgtaccaggtggcggcgctcggcctggtcaaggccgtcgaccac
tacgatccggcgcgcggctacgcgttcgaggcgtatgccgtgccgaccgtcaccggtgag
atcaagcggcacttccgcgatcacatgtggacgctgcacgtgccgcgccgggtccaggac
ctgcgcaaccgggtgcgccgcgcggccaaggaactggcccagacgacgccgggccgctcc
cccaccgtcgcggagatcgccgagtacaccgacctgagcgtcgaggacgtccgcaccggc
atggaggccctggactgcttcgccgcgctgtcgctggaggcggaggtgccgggcaccgac
gggtacgcgctcggcgacggcctgggcgaggccgacgcgcgctacgacctggtggtggac
cgggtggccgtacggccctgtctgcaggcgctgcccgagcgtgagcgcatgatcctctat
ctgcggttcttccggggcatgacgcagagccggatcgcccagcagctcggcatctcgcag
atgcatgtctcacggctgctcagcgggtgcttcgcccagctgcgcgaggagctgctcgcc
gaggccggctga
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