Streptomyces sp. SAT1: A8713_10195
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Entry
A8713_10195 CDS
T04706
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
strt
Streptomyces sp. SAT1
Pathway
strt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
strt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A8713_10195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strt03019
]
A8713_10195
03009 Ribosome biogenesis [BR:
strt03009
]
A8713_10195
Enzymes [BR:
strt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
A8713_10195
Messenger RNA biogenesis [BR:
strt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A8713_10195
Ribosome biogenesis [BR:
strt03009
]
Prokaryotic type
rRNA processing factors
A8713_10195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
ANH91499
LinkDB
All DBs
Position
complement(2337299..2341432)
Genome browser
AA seq
1377 aa
AA seq
DB search
MLEPTEPTQGSEELNTPSDTLPPRRRRRAASRPAGPPGAAEAPAEVTAPAVSPASAEDVG
AAGNTAAGTPAAEEPAAPARRTRRRASAPTGTPKATEAPAAETVVPATAAEETQAVDETS
AGTVESGEAAAPRRTRRRATRSVSAPTGAADEAAESGAVSGTEEPAAPAEAAAETAAPAR
RTRRRASAAAGAPQPAETAAPAEEPAAVEAAEEPAAPRARRRATRKVSAPAAEAAVETAA
EAPVAEESAPAAEVAEEPAAPRARRRATRKGAASAAEVSEPAAAAPAAEPAPAAEESAPR
RGRRRVERRAATGFSEPAARSGAGDDAPSKPARPAVAVFQPPVFAEPKFQFQTPQRAAAE
AAAEAAHDEEPDGTETPVAEPAARTEPAEQPGARRRRRRRGAADEEPEARTAEDAVEAPA
EPADDEAESAKGAESAESAEEADLTDGDDGDDGEESGSRRRRRRGGRRRRRGEAAEHGDE
EPEESGELAAAQAAQDAEDTAEQVEEDAEDASEESDEGEEHAGGGNSSSRRRRRRRRRAG
DGAQDGEPSADDPERTVVKVREPRGKKDERPGGGSDEVQSIKGSTRLEAKKQRRREGREQ
GRRRVPIITEAEFLARREAVERVMVVRQNGDRTQIGVLEDDVLVEHYVNKEQAVSYVGNV
YLGKVQNVLPSMEAAFIDIGKGRNAVLYAGEVNFEALGMGNGPRRIESALKSGQSVLVQV
TKDPIGHKGARLTSQVSLPGRYLVYVPEGSMTGISRKLPDTERARLKTILKKIVPDDAGV
IVRTAAEGASEEELRRDVERLQGQWEDIRKKAKNGNSSAPTLLYGEPDMTVRVVRDIFNE
DFSKVVVSGDEAWETIHGYVAHVAPDLAPRLSRWTSEVDVFATYRIDEQLAKALDRKVWL
PSGGSLVIDRTEAMVVVDVNTGKFTGQGGNLEETVTRNNLEAAEEIVRQLRLRDLGGIIV
IDFIDMVLESNRDLVLRRLLECLGRDRTKHQVAEVTSLGLVQMTRKRVGQGLLESFSETC
VHCNGRGVIVHMEQPTAAGGGGKRRKRARAGAEQPHEHEHETAAVQAAVPTAEEEAEAEA
DVVVEAQAEPVEVPAFELSPDEELYSSVAEAEAAASRGRGRRRASRRASAPAGAPKAAAD
GAAPAAPEVPTAQQVTAEQEAGRPVRPEPAEAAQAEPVAAEDPVVPAAGPEAPVAEEAAP
KGRTRRRATRRASAPAGSPAGAEAAVVTVAETAPEPQPVPAEEAAPAVAPAEAEAPAEEA
APARPRRRAVRKATAPTASEEAAVVVVPSGQAGAEEPAAAAESEAAEEAPAKKTVRKAAK
KATAKKAATKKTAAKKTVAKKATAKKATKTAKTAGAAKKSAAKKTAASPASAAADES
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaaccgaccgagcccacccagggttccgaagaactgaacacccccagcgacacg
ctgccgccgcgccgtcggcgccgcgccgcgtcgcgtccggcgggcccgcccggtgccgcc
gaggcaccggccgaggtcaccgctccggctgtatcgcctgcgtccgccgaggacgtcggg
gccgccgggaacacggccgccgggactccggccgccgaggagcccgccgctcccgcgcgc
cgcacccgccgtcgggcctccgcgcccaccgggacaccgaaggccaccgaggccccggcc
gccgagaccgtcgtcccggcgaccgccgccgaggagacccaggcggtggacgagacgtcc
gccgggaccgtcgagagcggcgaggccgccgctccgcgccgtacccgccgccgcgccacg
cgcagcgtgtccgcgcccaccggtgccgccgacgaggccgccgagagcggtgccgtgagc
ggtacggaggagccggccgcgcccgcggaggccgccgccgagaccgccgcgcccgcccgc
cggacccgccgccgcgcgtccgccgccgccggtgcgccgcagcccgccgagaccgccgcg
ccggccgaggagcccgccgccgtcgaggccgccgaggagcccgccgcgccgcgtgcccgt
cgccgtgccacgcgcaaggtgtcggcgcccgctgccgaggccgccgtggagacggcggcc
gaggcgccggtcgcggaggagtccgctcccgccgcagaggttgccgaagagcccgccgcg
ccgcgtgcccgccgccgggccacccgcaagggcgcggcgtccgccgccgaggtgagcgag
cccgccgccgcggctcccgccgccgagcccgcgcccgccgccgaggagtccgcgccgcgt
cgcggccgccgccgggtggagcggcgcgccgcgaccgggttctccgagcccgccgcgcgc
tccggcgccggggacgacgcgccgagcaagcccgcgcggcccgccgtcgccgtcttccag
ccgccggtcttcgccgagccgaagttccagttccagaccccgcagcgggccgccgccgag
gcggccgccgaggccgcgcacgacgaggagcccgacgggaccgagacccccgtggcggag
ccggccgcgcggaccgagccggccgagcagcccggggcgcggcgccgccgccgtcgccgg
ggcgccgccgacgaggagcccgaggcccgtaccgccgaggacgccgtcgaggcgcccgcc
gagcccgccgacgacgaggcggagtccgccaagggcgccgagtccgccgagtccgcggag
gaagcggatctcacggacggcgacgacggcgacgacggtgaggagtccggttcccgccgg
cgccgccgccgcggtggccgccgccggcgccgcggcgaggccgccgagcacggtgacgag
gagccggaggagagcggtgagctcgccgccgcgcaggccgcgcaggacgccgaggacacc
gccgagcaggtcgaggaggacgccgaggacgcgtccgaggagagcgacgagggcgaggag
cacgcgggcggcggcaacagcagcagccgccgccgtcgccgcaggcgtcgccgggccggg
gacggcgcccaggacggcgagccgtccgccgacgaccccgagcgcaccgtcgtcaaggtc
cgcgagccgcgcggcaagaaggacgagcggcccggcggcggcagcgacgaggtccagtcc
atcaagggctcgacccgcctggaggcgaagaagcagcgccgccgcgagggccgcgagcag
ggccgccgccgcgtcccgatcatcaccgaggccgagttcctggcccgccgcgaggccgtc
gagcgcgtgatggtggtccggcagaacggcgaccgcacgcagatcggcgtccttgaggac
gatgtgctcgtcgagcactacgtcaacaaggagcaggccgtctcgtacgtcggcaacgtc
tacctcggcaaggtgcagaacgtcctgccgtcgatggaggccgccttcatcgacatcggc
aagggccgcaacgccgtgctgtacgcgggcgaggtcaacttcgaggcgctcggcatgggc
aacgggccgcgccgcatcgagtccgccctgaagtccgggcagtccgtcctcgtccaggtc
accaaggacccgatcggacacaagggcgcccgcctgaccagccaggtctctctgccgggc
cgctacctcgtgtacgtccccgagggctcgatgaccggcatcagccgcaagctgcccgac
accgagcgggcccggctgaagaccatcctcaagaagatcgtccccgacgacgcgggcgtc
atcgtgcgcaccgccgccgagggcgcgagcgaggaggagctgcgccgcgacgtcgagcgg
ctccaggggcagtgggaggacatccgcaagaaggcgaagaacggcaactccagcgcgccg
accctgctgtacggcgagccggacatgaccgtccgcgtggtgcgcgacatcttcaacgag
gacttctccaaggtcgtcgtcagcggtgacgaggcgtgggagaccatccacggctatgtc
gcgcacgtcgccccggacctcgccccgcgcctgtcgcgctggacgagcgaggtcgacgtc
ttcgccacgtaccggatcgacgagcagctcgccaaggcgctggaccgcaaggtctggctg
cccagcggcggttcgctggtgatcgaccggaccgaggcgatggtcgtcgtcgacgtcaac
accggcaagttcaccggccagggcggcaacctggaggagacggtcaccaggaacaacctg
gaggcggccgaggagatcgtgcgccagctcaggctgcgcgacctcggcggcatcatcgtg
atcgacttcatcgacatggtcctggagtccaaccgcgacctggtgctgcgccgcctgctg
gagtgcctgggccgcgaccgcaccaagcaccaggtggccgaggtgacctcgctgggcctg
gtgcagatgacccgcaagcgggtgggccagggcctgctggagtccttctccgagacctgc
gtccactgcaacggccgcggtgtcatcgtgcacatggagcagcccacggccgccgggggc
ggcggcaagcgccgcaagcgcgcccgcgccggtgccgagcagccgcacgagcacgagcac
gagaccgcggcggtccaggccgccgtgcccaccgccgaggaggaggcggaggccgaggcc
gacgtcgtcgtcgaggcgcaggccgagccggtcgaggtgcccgcgttcgagctgtccccg
gacgaggagctgtacagctccgtcgccgaggcggaggccgccgcgtcccgtggccgcggc
cggcgccgggcgagccggcgggcgtccgccccggcgggcgcgccgaaggcggcggcggac
ggcgcggccccggccgctcccgaggtgccgaccgctcagcaggtgaccgcggagcaggag
gccgggcgcccggtgcgtccggagcccgccgaggcggcgcaggccgagccggtggccgcc
gaggacccggtcgtcccggccgccgggccggaggcgccggtggccgaggaggccgcgccg
aagggccgtacccgccgccgcgcgacccgcagggcgtcggctccggccggttccccggcg
ggagccgaggcggccgtggtgacggtcgcggagaccgcgcccgagccgcagccggtcccg
gccgaggaggccgccccggcggtcgctccggccgaggccgaggcgcccgcggaagaggcg
gctccggcccgtccgcgccgccgtgcggtgcgcaaggccaccgcgccgaccgcgtccgag
gaggcggccgtcgtggtcgtcccgtcgggccaggccggtgcggaggagcccgctgcggcc
gccgagtccgaggcggccgaggaggctccggccaagaagacggtccgcaaggccgccaag
aaggccacggcgaagaaggccgcgaccaagaagacggcggccaagaagaccgtggcgaag
aaggcgacggccaagaaggcgacgaagaccgccaagacggccggcgccgcgaagaagtcg
gcggcgaagaagaccgcggcgtccccggcctccgccgcggccgacgagagctga
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