Streptomyces sp. SAT1: A8713_14865
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Entry
A8713_14865 CDS
T04706
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
strt
Streptomyces sp. SAT1
Brite
KEGG Orthology (KO) [BR:
strt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strt03019
]
A8713_14865
Enzymes [BR:
strt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
A8713_14865
Messenger RNA biogenesis [BR:
strt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A8713_14865
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
WHD_HA2
AAA_19
AAA_22
nSTAND3
T2SSE
AAA_16
NACHT
nSTAND_NTPase5
SLFN-g3_helicase
AAA_30
MetJ
TsaE
PhoH
RsgA_GTPase
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ANH92283
LinkDB
All DBs
Position
3439360..3443349
Genome browser
AA seq
1329 aa
AA seq
DB search
MSTHPAPALGALASRLTELSLRDAHRLGRRLEGARKIRKPEARAAVLAEIDAEADKAARR
MAERRSRVPVVTYPAQLPVSQKKDEIATAIRDHQVVIVAGETGSGKTTQIPKICMELGRG
VRGMIGHTQPRRIAARTVAERVAEELDTPLGEAVGWKVRFTDQVDPDATFVKLMTDGILL
AEIQTDRELRAYDTIIIDEAHERSLNIDFLLGYLAQLLPKRPDLKVVITSATIDPERFSR
HFGDAPIVEVSGRTYPVEVRYRPLLEEDSEDADRDQITAITDAVEELMAEGSGDILVFLS
GEREIRDTADALTKKQYRSTEVLPLYARLSHAEQHRVFQQHTGRRIVLATNVAETSLTVP
GIKYVIDPGFARISRYSHRTKVQRLPIEPVSQASANQRKGRCGRTSDGICIRLYGEDDFL
ARPEFTDAEILRTNLASVILQMTAAGLGDIEKFPFIDPPDHRNIRDGVQLLQELGALDPA
QKDPRKRLTQTGRKLAQLPVDPRLARMVLEADKNGCAREVMVIAAALSIQDPRERPADKQ
AQADQQHARFRDESSDFLAFLNLWRYLREQQKERGSSSFRRMCKQEYLNFLRIREWQDIY
SQLRTVAKQMGIHLNEEDAPGDRVHVSLLAGLLSHIGMKDVKESKDSAPQQGRRDGGRGE
YLGARNAKFAIFPGSALFKKPPRFVMSAELVETSRLWARVNAKIEPEWVEPLAGHLLKRT
YSEPHWEKDQAAVMAYEKVTLYGVPIVAQRKVNYGRIDAEASRELFIRNALVEGDWRTHH
KFFADNRRLLSEVEELEHRARRRDIVVDDETLYDFYDQRVPEHVVSGAHFDSWWKHKRHE
QPDFLDFEREMLVRESAQAVTKADYPDSWRQGALKFRVTYQFEPGADADGVTVHIPLQVL
NQVTDEGFDWQIPGLREEVVTELIRSLPKPIRRHYVPAPNHAKAFLEQAVPLQEPLTETM
ARELKRRVGVPFEAEDFDWAKVPDHLKITFRIVDERRRKLAEDKDLEALKLRLRPKARQA
LSQAAAATAQRSGGESLERSGLTDWTIGSLTRVFETRRAGQPVKAYPALVDDGSAAGTVS
VRLFDTEAEQAEAMWRGTRRLILRNIPVNPAKFASEKLTNQQKIGLSANPHGSIQALFDD
CATAAADRLIADFGGPAWDEESYRKLYDKVRSEIVDLTVRTVGQVQQVLSAWQACERRLK
AVRSPALLANLTDVRQQLDALVKPGFVTEAGIRRLPDLMRYLVAADRRLQQMPANVQRDT
TRMEKVREMRDEYAWLLEQLPQGRPVPQQVRDIRWMLEELRVSYFAHALGTAYPVSDKRI
VKAIDAAAP
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgcatcccgcccccgccctcggcgccctcgcctcccgtctgaccgagctgtcg
ctgcgtgacgcgcaccggctcgggcgcaggctcgaaggcgcgcgcaagatccgcaagccc
gaggcgcgcgccgccgtcctggccgagatcgacgccgaggccgacaaggccgcgcggcgc
atggccgagcggcgctcgcgcgtgcccgtcgtcacctatcccgcgcaactgccggtcagc
cagaagaaggacgagatcgccacggcgatccgcgaccaccaggtcgtcatcgtcgccggt
gagaccgggtccgggaagaccacgcagatcccgaagatctgcatggagctgggccggggc
gtgcgcggcatgatcgggcacacccagccccgccggatcgccgcccgcacggtcgccgag
cgggtcgccgaggagctggacacaccgctcggcgaggccgtcggctggaaggtgcggttc
accgaccaggtcgacccggacgccaccttcgtcaagctgatgacggacggcatcctgctc
gccgagatccagaccgaccgcgagctgcgcgcctacgacacgatcatcatcgacgaggcc
cacgagcggtccctcaacatcgacttcctgctgggctatctcgcccagctgctgccgaag
cggcccgatctgaaggtcgtcatcacctcggcgaccatcgacccggagcggttctcccgg
cacttcggcgacgccccgatcgtcgaggtcagcgggcggacgtacccggtggaggtgcgc
taccggccgctcctggaggaggactccgaggacgccgaccgggaccagatcaccgcgatc
accgacgccgtcgaggagctgatggccgagggctccggcgacatcctggtcttcctctcc
ggcgagcgggagatccgcgacaccgccgacgcgctcaccaagaagcagtaccgctccacc
gaggtgctgccgctgtacgcgcgcctctcgcacgccgagcagcaccgcgtcttccagcag
cacaccggccgccggatcgtgctcgccaccaacgtcgccgagacctccctgaccgtcccc
ggcatcaagtacgtcatcgaccccggcttcgcccggatctcccgctacagccaccgcacc
aaggtgcagcggctgcccatcgagccggtctcgcaggccagcgccaaccagcgcaagggc
cgctgcgggcgtacgtccgacggcatctgcatccggctctacggcgaggacgacttcctg
gcccgcccggagttcaccgacgcggagatcctgcgcaccaacctcgcctccgtcatcctc
cagatgaccgcggccggcctcggcgacatcgagaagttcccgttcatcgacccgccggac
caccgcaacatccgcgacggcgtgcagctcctccaggagctgggcgcgctcgacccggcg
cagaaggacccgcgcaagcggctcacccagaccggccgcaagctggcccagctgcccgtc
gacccgcgtcttgcccggatggtcctggaggccgacaagaacggctgcgcgcgcgaggtc
atggtgatcgccgccgcgctgtccatccaggacccgcgcgagcgccccgccgacaagcag
gcccaggccgaccagcagcacgcccgcttccgggacgagtccagcgacttcctcgccttc
ctcaacctgtggcgctatctgcgcgagcagcagaaggagcgcggctcgtcgtccttccgc
cgcatgtgcaagcaggagtacctcaacttcctgcgcatccgcgaatggcaggacatctac
tcccagctgcgcacggtcgccaagcagatgggcatccacctcaacgaggaggacgccccc
ggcgaccgcgtccatgtctccctgctggccggcctgctctcgcacatcggcatgaaggac
gtgaaggagtccaaggactccgcaccgcagcagggccgcagggacggcggccggggcgag
tacctgggcgcccgcaacgccaagttcgcgatcttccccggctccgcgctgttcaagaag
ccgccgcggttcgtgatgtccgccgagctcgtcgagacctcccgcctgtgggcgcgggtc
aacgcgaagatcgagcccgagtgggtcgagccgctggccggccacctgctgaagcggacg
tacagcgaaccgcactgggagaaggaccaggccgcggtgatggcgtacgagaaggtgacg
ctgtacggcgtgccgatcgtggcccagcggaaggtcaactacggccggatcgacgcggag
gccagccgcgagctgttcatccgcaacgccctggtggagggtgactggcgcacccaccac
aagttcttcgccgacaaccgcagactgctcagcgaggtcgaggagctggagcaccgcgcc
cggcgccgggacatcgtcgtcgacgacgagacgctgtacgacttctatgaccagcgggtg
cccgagcacgtcgtctccggcgcccacttcgactcctggtggaagcacaagcggcacgag
cagcccgacttcctggacttcgagcgggagatgctcgtccgggagtcggcccaggcggtc
accaaggccgactatccggactcctggcgccagggcgcgctgaagttccgggtgacctac
cagttcgagccgggcgcggacgcggacggggtgaccgtccacatcccgctccaggtgctc
aaccaggtcacggacgagggcttcgactggcagattccgggcctgcgcgaagaggtcgtc
accgagctgatccgctcgctgcccaagccgatccgccgccactacgtccccgcgcccaac
cacgcgaaggcgttcctggagcaggcggtgcccctccaggagccgctgaccgagaccatg
gcgcgcgagctgaagcgccgggtcggggtgccgttcgaggccgaggacttcgactgggcc
aaggtccccgaccatctgaagatcaccttccggatcgtcgacgagcggcgccgcaagctg
gccgaggacaaggatctcgaagcgctcaagctgaggctccggccgaaggcgcgccaggcc
ctgtcccaggccgccgcggcgaccgcgcagcgcagcggcggcgagtcgctggagcgctcg
gggctgaccgactggacgatcggctcgctcacccgggtcttcgagacccgccgggccggc
cagccggtgaaggcgtacccggcgctggtggacgacggctctgcggcgggcaccgtctcg
gtccggctcttcgacaccgaggcggagcaggccgaggccatgtggcggggcacgcgccgg
ctgatcctgcgcaacatcccggtgaaccccgcgaagttcgcgtccgagaagctgaccaac
cagcagaagatcggtctttcggccaatccgcacggatcgatccaggccctgttcgacgac
tgcgccacggctgcggcggaccggctgatcgccgacttcggcggaccggcctgggacgag
gagtcgtaccgcaagctctacgacaaagtacggtccgagatcgtggacctgaccgtacgg
accgtgggccaggtgcagcaggtgctgtccgcctggcaggcgtgcgagcgtcggctcaag
gcggtccgcagccccgcgctgctggccaatctgacggatgtacggcagcagttggacgcc
ctcgtgaagcccggcttcgtcaccgaggcggggatacggcggctgcccgacctgatgcgc
tatctggtcgcggcggaccggcggctccagcagatgccggccaacgtccagcgggacacc
acgcgcatggagaaggtccgggagatgcgcgacgagtacgcgtggctgctggaacagctg
ccgcagggccgcccggtgccgcagcaggtgcgcgacatccgctggatgctggaggagctg
cgggtcagctacttcgcgcacgcgctgggcacggcgtaccccgtctccgacaaacggatc
gtgaaggcgatcgacgcggcggcaccgtga
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