Streptomyces sp. SAT1: A8713_18250
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Entry
A8713_18250 CDS
T04706
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
strt
Streptomyces sp. SAT1
Pathway
strt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
strt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A8713_18250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strt03019
]
A8713_18250
03400 DNA repair and recombination proteins [BR:
strt03400
]
A8713_18250
Enzymes [BR:
strt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A8713_18250
Messenger RNA biogenesis [BR:
strt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A8713_18250
DNA repair and recombination proteins [BR:
strt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A8713_18250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
ANH92859
UniProt:
A0A1A9J0K2
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All DBs
Position
4232339..4234318
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AA seq
659 aa
AA seq
DB search
MGGTGGVTDMAVTDSEALATLRRVFGYEAFRGEQEAVIEHVITGGDAVVLMPTGGGKSLC
YQIPALVRPGTGIVVSPLIALMQDQVDALRALGVRAGFINSTQDFDERRTVEAEFLTGEL
DLLYLAPERLRLDATLDLLSRGKISVFAIDEAHCVSQWGHDFRPDYLSLSLLGERWPDVP
RIALTATATRATHQEITQRLDMPRARHFEASFDRPNIQYRIVPKADPKKQLLAFLRAEHE
GDAGIVYCLSRNSVEKTAEFLSANGVRAVPYHAGLDAGTRATHQARFLREDGLVVVATIA
FGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWMAYGLNDVIQQRKMIQSG
EGDESFRRRAAAHLDSMLALCETAGCRRGQLLAYFGQDPDASGCGNCDTCLTPPETWDGT
VAAQKVLSTVVRLQRERGQKFGAVQIIDILLGKRTGKVIQFDHDQLSVFGIGTELAEGEW
RGVVRQLLAQGLLAVEGEYGTLVLTEASGEVLRADRKVPLRKEPKRPATARSASSSSSGR
GKGKAAVAELPADLLPAFEALRAWRAEQAREQGVPAYVIFHDATLREIVTLWPDSVARLG
TVGGVGEKKLATYGEGVIGVLKSLSAPSGDRAASAPGPASDIEPEPDFGPEPEPEDDWI
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggacaggcggtgtcaccgacatggcagtgacggacagcgaggcgctggccacg
ctgcgccgggtcttcgggtacgaggcgttccggggcgagcaggaagcggtcatcgagcat
gtgatcaccggcggcgacgccgtcgtgctcatgcccaccggcggcggcaagtcgctgtgc
taccagatccccgccctggtcaggcccggcacgggcatagtggtctccccgctgatcgcg
ctgatgcaggaccaggtggacgccctgcgcgccctcggcgtgcgcgccggtttcatcaac
tccacgcaggacttcgacgagcgccgcacggtcgaggcggagttcctcaccggcgagctg
gacctgctctacctggcaccggagcggctgcgcctggacgccacgctcgacctgctctcc
cgcggcaagatctccgtcttcgccatcgacgaggcccactgcgtctcccagtggggccac
gacttccgccccgactacctgtcgctgtccctgctgggcgagcgctggcccgacgtgccc
cggatcgcgctcacggcgaccgccacccgggccacgcaccaggagatcacccagcggctg
gacatgccgcgggcccggcacttcgaggccagcttcgaccggcccaacatccagtaccgg
atcgtgcccaaggccgaccccaagaagcagcttctggccttcctgcgcgcggagcacgag
ggcgacgcgggcatcgtgtactgcctctcgcgcaactccgtggagaagaccgccgagttc
ctgtcggccaacggcgtccgcgcggtgccctaccacgcgggcctcgacgcgggcacccgc
gccacgcaccaggcccgcttcctgcgcgaggacggcctcgtcgtggtcgcgaccatcgcc
ttcggcatgggcatcgacaagccggacgtccgcttcgtcgcccacctcgacctgcccaag
tccgtcgagggctactaccaggagaccggccgcgccggccgcgacggcctgccctccacc
gcctggatggcctacggcctgaacgacgtcatccagcagcgcaagatgatccagtccggc
gagggcgacgagtccttccgccgccgcgccgccgcccacctggactcgatgctcgccctg
tgcgagacggccggctgccgccgcggacagctcctcgcctacttcggccaggaccccgac
gcgagcggctgcggcaactgcgacacctgtctgaccccgcccgagacctgggacggcacg
gtcgccgcccagaaggtgctctccacggtggtccggctccagcgcgagcgggggcagaag
ttcggcgccgtgcagatcatcgacatcctgctgggcaagcgcaccggcaaggtgatccag
ttcgaccacgaccagctctccgtcttcggcatcggcacggagctggccgagggcgagtgg
cgcggggtcgtgcgccagctgctggcgcagggactgctcgcggtcgagggcgagtacggc
acgctggtgctgaccgaggccagcggggaggtgctgcgcgccgaccggaaggtgccactg
cgcaaggagccgaagcggccggccaccgcgcgctccgcgtcgtcctcgtcctccgggcgg
ggcaagggcaaggccgccgtggcggagctgcccgcggacctgctccccgccttcgaggcg
ctgcgcgcctggcgcgccgagcaggcccgcgagcagggcgttcccgcgtacgtcatcttc
cacgacgccaccctccgcgagatcgtcacgctctggccggactcggtggcgcggctcggc
acggtcggcggggtcggcgagaagaagctcgcgacctacggggagggcgtcatcggcgtg
ctgaagtcgctgtcggccccgtccggcgaccgcgccgcctccgcacccggccccgcctcc
gacatcgagcccgagccggacttcggtccggagccggaaccggaggacgactggatatag
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