Streptomyces sp. SAT1: A8713_18570
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Entry
A8713_18570 CDS
T04706
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
strt
Streptomyces sp. SAT1
Pathway
strt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
strt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A8713_18570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strt03021
]
A8713_18570
03400 DNA repair and recombination proteins [BR:
strt03400
]
A8713_18570
Enzymes [BR:
strt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A8713_18570
Transcription machinery [BR:
strt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A8713_18570
DNA repair and recombination proteins [BR:
strt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A8713_18570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Motif
Other DBs
NCBI-ProteinID:
ANH92917
LinkDB
All DBs
Position
4296205..4300119
Genome browser
AA seq
1304 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITYVDEERRTRDLPSLEAHVSVERQQIENRRDADLEARAKKLETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWTRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLESFDLDEEAEKLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDGEMRNVKGE
DRSFASVAEAIMAFDAGELSLQSRVDIRFPVGTIPPRGWTPPAREEGDEGVGERVWQQGD
SFRLRTTLGRALFNELLPEDYPFVDYEVGKKQLSEIVNDLAERYPKVIVAATLDNLKASG
FFWATRSGVTVAISDVVVPDAKKEIVAGYEAKDEKVQKQYERGLITKEERTQELIQIWTQ
ATNEVAEAMNENFPKTNPIFMMVNSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASF
REGLSVLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRGLKLH
IASRDADGVLRKAEDVETSVYARCLAEDIVVDGKVLAPAGTDLGDVLIDELVKHGVEEVK
TRSVLTCESAVGTCAMCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVA
GDDITQGLPRVVELFEARTPKGVAPISEASGRIRIEETEKTKKIVVTPDDGSDETAYPIS
KRARLLVGEGDHVEVGQKLTVGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDK
HIEIIIRQMLRRVTIIESGDAELLPGELVERSKFEQENRRVVQESGHPASGRPQLMGITK
ASLATESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRV
EPTEEAKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctccggatcggcctggccaccgctgacgacatc
cgtcagtggagccacggcgaggtcaagaagcccgagaccatcaactaccgcaccctcaag
ccggaaaaggacgggctcttctgcgagaagatcttcggtcccacccgggactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcatctgcgagcgctgtggcgtc
gaggtcacgcgtgccaaggtgcgccgtgagcggatgggccacatcgagctggccgccccc
gtcacccacatctggtacttcaagggcgtcccgtcgcggctgggctacctgctcgacctc
gccccgaaggacctggagaaggtcatctacttcgcggcgtacatgatcacgtacgtcgac
gaggagcgccgcacccgcgacctgccctcgctggaggcgcacgtctccgtcgagcgccag
cagatcgagaaccgccgcgacgccgacctggaggcccgcgccaagaagctcgagaccgac
ctggccgagctggaggccgagggcgccaaggccgatgtgcgccgcaaggtgcgcgagggc
gccgagcgcgagatgaagcagctgcgcgaccgcgcgcagcgcgagatcgaccgcctcgac
gaggtctggacccggttcaagaacctcaaggtccaggacctggagggcgacgagctcctc
taccgcgagctgcgcgaccgcttcggcacctacttcgacggctcgatgggtgccgcggcg
ctgcagaagcgcctggagtccttcgacctcgacgaggaggccgagaagctccgcgagatc
atccgcaccggcaagggccagaagaagacccgtgcgctcaagcgcctcaaggtcgtctcc
gcgttcctgcagaccagcaacagccccaagggcatggtgctggactgcgtgccggtcatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgtgtcatcaaccgcaacaaccgcctgaagcggcttctcgacctc
ggcgcgcccgagatcatcgtgaacaacgagaagcgcatgctccaggaggccgtcgacgcg
ctcttcgacaacggccgccgcggccgcccggtcacgggccccggcaaccgtccgctgaag
tcgctgtccgacatgctcaagggcaagcagggccgcttccgccagaacctgctcggcaag
cgagtcgactactcggcgcgttccgtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggtctgcccaaggcgatggcgctggagctgttcaagccgttcgtgatgaagcgcctg
gtggacctgaaccacgcgcagaacatcaagtccgccaagcgcatggtggagcgcggccgc
accgtcgtgtacgacgtcctcgaagaggtcatcgccgagcacccggtgctgctcaaccgt
gctcccaccctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtgtgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctgtccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctcaagccggccgacggccgtccggtgacgatgccgacccaggac
atggtcctcggtctgttcttcctcaccaccgacggcgagatgcggaacgtgaagggcgag
gaccgctccttcgcgtccgtggccgaggcgatcatggcgttcgacgccggtgagctctcg
ctccagtcgcgcgtggacatccgcttcccggtgggcaccatcccgccgcgcggctggacc
ccgccggcccgcgaggaaggcgacgagggcgtcggggagcgggtgtggcagcagggtgac
agcttccggctgcggaccaccctgggccgcgcgctcttcaacgagctgctgcccgaggac
tacccgttcgtcgactacgaggtcggcaagaagcagctctcggagatcgtcaacgacctc
gccgagcgctacccgaaggtcatcgtggcggcgacgctcgacaacctgaaggcgtccggc
ttcttctgggccacccgctccggtgtcaccgtcgccatctccgacgtcgtcgtccccgac
gcgaagaaggagatcgtcgccgggtacgaagccaaggacgagaaggtccagaagcagtac
gagcgcggtctgatcaccaaggaagagcgcacgcaggagctcatccagatctggacccag
gcgaccaacgaggtcgccgaggcgatgaacgagaacttcccgaagaccaacccgatcttc
atgatggtgaactcgggtgcacgaggcaacatgatgcagatgcgtcagatcgccggtatg
cgtggtctggtgtcgaacgcgaagaacgagacgatcccgcgtccgatcaaggcgtcgttc
cgtgagggcctgtccgtgctggagtacttcatctccacgcacggtgcccgtaagggtctg
gcggacaccgccctgcgtaccgccgactcgggttacctcacccgtcgtctggtggacgtc
tcgcaggacgtcatcatccgcgaggaggactgcggcaccgaccgcggcctcaagctgcac
atcgcgtcccgcgacgcggacggcgtgctgcgcaaggcggaggacgtcgagacgtccgtg
tacgcgcgctgcctcgccgaggacatcgtcgtcgacggcaaggtgctggccccggccggt
accgacctcggtgacgtgctcatcgacgagctggtcaagcacggcgtcgaggaggtcaag
acccgctcggtcctgacctgcgagtccgccgtcggcacctgcgccatgtgctacggccgt
tcgctggccaccggcaagctggtcgacatcggtgaggcggtcggcatcatcgccgcccag
tccatcggtgagcccggtacccagctgacgatgcgtaccttccacaccggtggtgtggcc
ggtgacgacatcacccagggtctgccccgtgtcgtcgagctcttcgaggcccgtacgccg
aagggtgtcgccccgatctccgaggcctccggccgcatccggatcgaggagaccgagaag
accaagaagatcgtcgtcaccccggacgacggcagcgacgagacggcgtacccgatctcg
aagcgcgcccgtctgctggtcggcgagggcgaccacgtcgaggtgggccagaagctcacc
gtgggtgccaccaacccgcacgacgtgctgcgcatcctgggtcagcgtgccgtccaggtc
cacctggtcggcgaggtccagaaggtctacaactcgcagggtgtgtcgatccacgacaag
cacatcgagatcatcatccggcagatgctccgccgggtgacgatcatcgagtccggcgac
gccgagctgctgcccggcgagctggtcgagcgctcgaagttcgagcaggagaaccgtcgt
gtggtccaggagagcggacacccggcctccggccgtccgcagctgatgggtatcaccaag
gcctcgctggcgacggagtcctggctgtcggccgcctccttccaggagacgacccgagtg
ctgacggacgcggcgatcaacgccaagtccgacagcctcatcggcctcaaggagaacgtc
atcatcggtaagctcatcccggccggtacgggtctgtcccgttaccgcaacatccgggtg
gagccgaccgaggaggccaaggccgcgatgtactcggccgtcggctacgacgacatcgac
tactcgccgttcggcaccggctccggccaggccgttccgctggaggactacgactacggt
ccgtacaaccagtaa
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