Streptomyces sp. SAT1: A8713_23860
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Entry
A8713_23860 CDS
T04706
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
strt
Streptomyces sp. SAT1
Pathway
strt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
strt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A8713_23860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strt03019
]
A8713_23860
03400 DNA repair and recombination proteins [BR:
strt03400
]
A8713_23860
Enzymes [BR:
strt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A8713_23860
Messenger RNA biogenesis [BR:
strt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A8713_23860
DNA repair and recombination proteins [BR:
strt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A8713_23860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
AAA_22
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
ANH93834
UniProt:
A0A1A9J3A3
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All DBs
Position
5521738..5523897
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AA seq
719 aa
AA seq
DB search
MEQLDLRAEADAVLAELVGDPGGSARLREDQWQAVAALVEDRRRALVVQRTGWGKSAVYF
VATALLRRRGAGPTVIVSPLLALMRNQVESASRAGIRARTINSANPEEWDTIYGEVERGE
TDVLLVSPERLNSVDFREQVLPKLAATTGLLVVDEAHCISDWGHDFRPDYRRLRSVLAGL
APDVPVLATTATANARVTADVAEQLGTGASEALVLRGSLERESLRLGVVRLPDAAHRLAW
LAEHLEELPGSGIIYTLTVAAAEEAAAHLRQRGFTVASYTGRTENADRLQAEEDLLANRV
KALVATSALGMGFDKPDLGFVLHLGSPSSPIAYYQQVGRAGRGVAHADVLLLPGKEDEAI
WRYFADTAFPPEAQVRQTLTALADAGRPLSVPALEAVVDLRRSRLETMLKVLDVDGAVKR
VKGGWISTGEPWSYDAERYAWVARQRAAEQQAMRDYVTTSRCRLEFLRRQLDDEGAAPCG
RCDNCAGPWADVSVSDQSLTTAAQELDRPGAEIEPRRMWPTGMPALGVDLKGRIPPGEQC
SAGRALGRLSDIGWGNRLRPLLAENAPDGAVPDDVLRAAVAVLADWARSPGGWATDAPDA
LARPAGVVAVPSTTRPRLVGSLAEGIATVGRLPFLGTLTYTGPDDGRAVRRSNSAQRLKA
LSQAFTISEQLADALTRSPGPVLLVDDSTDSGWTLAVAARLLRRAGSGPVLPLVLATAG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggaacaactggacctgcgcgccgaagccgatgccgtcctcgccgagctggtcggcgac
ccgggcggttcggcgcggctgcgggaagaccagtggcaggctgtggcggccctggtggag
gatcggcgccgtgccctcgtggtgcagcgcaccggctggggcaagtcggcggtgtacttc
gtggccaccgctctgctgcgcagacgcggcgccggtccgacggtgatcgtctcgccgctg
ctggcgctgatgcgcaaccaggtcgagtccgcgtcgcgggccggcatccgggcgcgcacg
atcaactccgccaacccggaggagtgggacacgatctacggggaggtcgagcgcggcgag
accgacgtcctcctggtcagtccggagcggctgaactcggtggacttccgcgagcaggtg
ctgcccaagctggcggccacgaccggcctgctggtggtcgacgaggcgcactgcatctcc
gactggggacacgacttccgccccgactaccggcggctgcggtcggtgctcgccgggctc
gcccccgacgtgccggtcctggccaccaccgcgacggccaacgcgcgcgtcaccgcggac
gtggccgagcaactgggcaccggcgcgagcgaggccctggtgctgcgcggctccctggag
agggagagcctgcggctgggcgtggtccggctgccggacgccgcgcaccgcctcgcctgg
ctggcggagcacctggaggagctgccgggatccgggatcatctacaccctcacggtcgcc
gcggccgaggaggccgccgcccatctgcgccagcgcggcttcacggtcgcctcctacacc
ggtcgtacggagaacgccgaccgcctccaggccgaggaggacctgctcgccaaccgggtc
aaggcgctggtggccacctccgcgctcggcatgggcttcgacaagccggacctgggcttc
gtgctccatctcggttcgccgtcctccccgatcgcctactaccagcaggtcgggcgggcg
gggcgcggtgtggcacacgccgacgtactgctgctgccgggcaaggaggacgaggcgatc
tggcggtacttcgccgacaccgccttcccgcccgaggcccaggtgcgccagaccctcacg
gccctcgccgacgcggggcgcccgctgtccgtcccggcgctggaggcggtggtggacctg
cggcgcagccgactggagaccatgctcaaggtgctggacgtggacggcgcggtcaagcgc
gtcaagggcggctggatctccaccggcgaaccgtggagctacgacgccgagcggtacgcc
tgggtggcacggcagcgggcggccgagcagcaggccatgcgcgactacgtgaccacgtcg
cggtgccggctggagttcctgcgccggcagctggacgacgagggcgcggccccgtgcggc
cgctgcgacaactgcgcgggaccgtgggccgacgtgtccgtctcggaccagtcgctgacg
accgccgcgcaggagctggaccgccccggagccgagatcgagccgcgccggatgtggccg
acgggcatgcccgcgctgggcgtcgacctcaagggccgcatcccgcccggcgagcagtgc
tcggccgggcgcgccctgggacggctgtccgacatcggctggggcaaccggctgcgcccc
ctgctcgcggagaacgcgccggacggcgcggtccccgacgacgtcctgcgggccgccgtc
gccgtcctcgcggactgggcgcgctccccgggcggctgggcgacggacgcgccggacgcc
ctggcccgtccggcgggcgtggtcgcggttccgtccacgacccgcccgcggctcgtcggc
tccctcgccgagggcatcgcgaccgtgggccgcctgcccttcctcggcaccctgacgtac
accggaccggacgacggccgcgcggtgcgccgcagcaactccgcgcagcgcctcaaggcg
ctgtcccaggcgttcaccatctccgagcagctggcggacgccctgacccgctctcccggc
cccgtcctgctcgtggacgacagcaccgactccggctggaccctggcggtcgccgcccgc
ctgctgcgccgggcgggcagcggcccggtcctgccgctggtcctcgcgacggcgggctga
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