KEGG   Streptomyces sp. SAT1: A8713_23890
Entry
A8713_23890       CDS       T04706                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
strt  Streptomyces sp. SAT1
Pathway
strt02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:strt00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    A8713_23890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:strt03021]
    A8713_23890
Transcription machinery [BR:strt03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     A8713_23890
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HC2 Sigma70_r1_1 Paramyxo_P_V_N DUF7093 CDC27 NUDE_C
Other DBs
NCBI-ProteinID: ANH95634
LinkDB
Position
5533302..5534852
AA seq 516 aa
MSASTSRTLPPEIAESVSVMALIERGKAEGQIAGDDVRRAFEADQIPATQWKNVLRSLNQ
ILEEEGVTLMVSAAEPNKRTRKSVAAKSPVKRTATKTVAAKTVTTRKATATATPTAPPAA
DAPVEDDAPAKKAAAKKTTAAAKKTAAKKTTAAAKKTTAKKTAGKKDDAELLEDEVLEDP
KGATEEPEGAESAGFVLSDEDEDDAPAQQVAAAGATADPVKDYLKQIGKVPLLNAEQEVE
LAKRIEAGLFAEDKLANSDKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYTG
RGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHM
VEVINKLARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDGD
SEFGDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEI
GKVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq 1551 nt   +upstreamnt  +downstreamnt
gtgtcggccagcacatcccgtacgctcccgccggagatcgccgagtccgtctctgtcatg
gcgctcattgagcggggaaaggctgaggggcagatcgccggcgacgatgtgcgtcgggcc
ttcgaagctgaccagatcccggccactcagtggaagaacgtactgcgcagcctcaaccag
atcctcgaggaagagggtgtgacgctgatggtcagtgccgcggagccaaacaagcgcacc
cgaaagagcgtcgcagcgaagagtccggtcaagcgcaccgccaccaagacggtcgcggcg
aagacggtgaccaccaggaaggccaccgccaccgccacgccgacggcgccgcccgccgcc
gacgccccggtcgaggacgacgcgcccgccaagaaggccgccgccaagaagacgaccgcc
gccgcgaagaagacggcggcgaagaagacgaccgccgccgccaagaagacgacggccaag
aagaccgccggcaagaaggacgacgccgagctcctcgaggacgaggtgctggaggacccc
aagggcgcgacggaggagccggagggcgcggagagcgccggtttcgtgctctccgacgag
gacgaggacgacgcccccgcccagcaggtcgccgcggccggcgccaccgccgacccggtc
aaggactacctcaagcagatcggcaaggtccccctgctcaacgccgagcaggaagtcgaa
ctggccaagcgcatcgaggcgggtctcttcgccgaggacaagctggccaactccgacaag
ctggcgccgaagctcaagcgcgagctggagatcatcgccgaggacggccgccgcgccaag
aaccacctcctggaggccaacctccgtctggtggtctccctggccaagcgctacaccggc
cgcggcatgctcttcctggacctcatccaggagggcaacctcggtctgatccgcgcggtc
gagaagttcgactacaccaagggctacaagttctccacgtacgccacctggtggatccgg
caggcgatcacccgcgccatggccgaccaggcccgcaccatccgtatcccggtgcacatg
gtcgaggtcatcaacaagctcgcgcgcgtgcagcgccagatgctccaggacctgggccgc
gagcccaccccggaggagctggccaaggaactcgacatgaccccggagaaggtcatcgag
gtccagaagtacggccgcgagcccatctcgctgcacaccccgctgggcgaggacggcgac
agcgagttcggtgacctcatcgaggactccgaggcggtcgtcccggccgacgcggtgagc
ttcacgctgctccaggagcagctgcactcggtgctcgacaccctgtccgagcgcgaggcg
ggtgtcgtctccatgcgcttcggtctcaccgacggccagcccaagaccctcgacgagatc
ggcaaggtctacggcgtcacgcgtgagcggatccgccagatcgagtccaagaccatgtcg
aagctgcgccacccgtcgcgctcgcaggtgctgcgcgactacctcgactag

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