Streptomyces sp. SAT1: A8713_23890
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Entry
A8713_23890 CDS
T04706
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
strt
Streptomyces sp. SAT1
Pathway
strt02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
strt00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A8713_23890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strt03021
]
A8713_23890
Transcription machinery [BR:
strt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A8713_23890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
Sigma70_r1_1
Paramyxo_P_V_N
DUF7093
CDC27
NUDE_C
Motif
Other DBs
NCBI-ProteinID:
ANH95634
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Position
5533302..5534852
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AA seq
516 aa
AA seq
DB search
MSASTSRTLPPEIAESVSVMALIERGKAEGQIAGDDVRRAFEADQIPATQWKNVLRSLNQ
ILEEEGVTLMVSAAEPNKRTRKSVAAKSPVKRTATKTVAAKTVTTRKATATATPTAPPAA
DAPVEDDAPAKKAAAKKTTAAAKKTAAKKTTAAAKKTTAKKTAGKKDDAELLEDEVLEDP
KGATEEPEGAESAGFVLSDEDEDDAPAQQVAAAGATADPVKDYLKQIGKVPLLNAEQEVE
LAKRIEAGLFAEDKLANSDKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYTG
RGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHM
VEVINKLARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDGD
SEFGDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEI
GKVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggccagcacatcccgtacgctcccgccggagatcgccgagtccgtctctgtcatg
gcgctcattgagcggggaaaggctgaggggcagatcgccggcgacgatgtgcgtcgggcc
ttcgaagctgaccagatcccggccactcagtggaagaacgtactgcgcagcctcaaccag
atcctcgaggaagagggtgtgacgctgatggtcagtgccgcggagccaaacaagcgcacc
cgaaagagcgtcgcagcgaagagtccggtcaagcgcaccgccaccaagacggtcgcggcg
aagacggtgaccaccaggaaggccaccgccaccgccacgccgacggcgccgcccgccgcc
gacgccccggtcgaggacgacgcgcccgccaagaaggccgccgccaagaagacgaccgcc
gccgcgaagaagacggcggcgaagaagacgaccgccgccgccaagaagacgacggccaag
aagaccgccggcaagaaggacgacgccgagctcctcgaggacgaggtgctggaggacccc
aagggcgcgacggaggagccggagggcgcggagagcgccggtttcgtgctctccgacgag
gacgaggacgacgcccccgcccagcaggtcgccgcggccggcgccaccgccgacccggtc
aaggactacctcaagcagatcggcaaggtccccctgctcaacgccgagcaggaagtcgaa
ctggccaagcgcatcgaggcgggtctcttcgccgaggacaagctggccaactccgacaag
ctggcgccgaagctcaagcgcgagctggagatcatcgccgaggacggccgccgcgccaag
aaccacctcctggaggccaacctccgtctggtggtctccctggccaagcgctacaccggc
cgcggcatgctcttcctggacctcatccaggagggcaacctcggtctgatccgcgcggtc
gagaagttcgactacaccaagggctacaagttctccacgtacgccacctggtggatccgg
caggcgatcacccgcgccatggccgaccaggcccgcaccatccgtatcccggtgcacatg
gtcgaggtcatcaacaagctcgcgcgcgtgcagcgccagatgctccaggacctgggccgc
gagcccaccccggaggagctggccaaggaactcgacatgaccccggagaaggtcatcgag
gtccagaagtacggccgcgagcccatctcgctgcacaccccgctgggcgaggacggcgac
agcgagttcggtgacctcatcgaggactccgaggcggtcgtcccggccgacgcggtgagc
ttcacgctgctccaggagcagctgcactcggtgctcgacaccctgtccgagcgcgaggcg
ggtgtcgtctccatgcgcttcggtctcaccgacggccagcccaagaccctcgacgagatc
ggcaaggtctacggcgtcacgcgtgagcggatccgccagatcgagtccaagaccatgtcg
aagctgcgccacccgtcgcgctcgcaggtgctgcgcgactacctcgactag
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