Salmo trutta (river trout): 115147218
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Entry
115147218 CDS
T08542
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115147218
Membrane trafficking [BR:
stru04131
]
Protein recycling
Others
Others
115147218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
PSII_BNR
Motif
Other DBs
NCBI-GeneID:
115147218
NCBI-ProteinID:
XP_029545184
Ensembl:
ENSSTUG00000023930
LinkDB
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Position
14:68654103..68793778
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AA seq
1288 aa
AA seq
DB search
MERVVRLCPIWHNNVFWFMLLIIIYFFLAAKSELTCRSCQPGDKGRIKELLFKTDTREFA
TGYGEEVIGNGDGATASRSLNSASAETQQLDCAVGSDECIQGKYIYSRRKRNTDMLFRSK
NALLDGGMHYGGGKQRKFTPRGEYKVSNLKMNLHAGNTDVGKTRADLIPDISHKHRVRRN
SPRANIGDNKVKFSGSPKRRETLPLSYSREGITSPAGRSRVTRSELRWSNEDRRAASSRQ
DELKLTSSTFALTGDSAHNQAMVHWSGQNSSVILMLTKLFDFNLNSVTESSLWRSTDYGT
TYQKLNEKVGTKTILSYLYVSPNNKRKIMLLTDPEVESSLLISSDEGATYQKYRLSFYIL
SLLFHPEQEDWILAYSHDQKLYSSVEFGRRWQLVHERVAPNRFYWSKTGLDKEPGLIHLE
TIISEGQALYVTCKLQNCTEANKGKPFPGYIDPNSLVVQDEYVFVQVSTGGRPIYYVSAK
REVFTPMKLPKYTLPKDLHVISTDENRVVAAVQEWNQNDTYNLYVSENGGVFYTLALENV
VSSMGHEGNVMIDLYEVAGIKGMFLANKKMDNVVKTYITYNRGRDWRLLQAPTADLRGNS
IRCELPYCSLHLHLHVSANPYTSGNIESKDSAPGIIVASGSIGAELTTSNVSMFITSDAG
NTWRQIFDEEYSVLYLDQGGALVAIRHTPLPIRHLWMSFDEGRQWNKYSFTMSPLFVDGL
LGEPGEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCTEGDYQTWHLHNRGEPCIMGVK
RIYRKLKPIARCVMGKTYSVTMTSAPCDCTEADFECDYGYERRSDGKCTPAFWFLPSSMS
RSCTTGTTFINSTGYRKVVSNNCTAGVIAEYTARRQHCPTQAPKGLHLVTSEGKLTATLG
TNVTFLVFLEEGDGARTSIMVDFGDGHALTYSNVSSIEDGVKHVYKAVGIYRVTATGENS
LGSESVVLYLHVTCQLEYIHLSAPFVAVKSKEVNLTAVLWPSQVGTVTYIWWFGNNTEPI
ITLEGSVACTFSQEGVNTVTVQVSAGNAILQDRKTIAVHEYSRSHLLAFSSNLDDHNPDV
AEWRLDVSRVIKNSMVKATGVSPEQLLVTVLPGLPTAAEVFLLPDKELTEGKPEKNSAHL
DQLSEILLSALNQNLVQFTLRPGVQVTVYAAHLSAAPLVDTSENHSGSAMLMLLSVVVLG
LAIFVVYKFKRKIPGLNVYAQMQNEKEQEMIPSPVSPTESTLVSPNTPRELVTSPELMDT
ELNIRPIGCIKPHAHVKFSTELPTYINV
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggagagggttgtcagattatgccctatttggcacaataacgttttttggtttatgctt
ttgataatcatatatttctttctagccgccaaatcagagctaacttgcagatcatgtcag
ccgggagataaggggcgtattaaggaattactgtttaaaacggacacacgagaattcgca
acagggtacggagaggaagttattggaaatggagacggggcaactgcttcacggagttta
aattctgcaagtgccgaaactcaacagcttgattgcgcagttgggtccgatgaatgcatc
caggggaaatacatctactcaaggcgaaaacggaatactgacatgctgttccgttccaag
aacgcactactcgatggaggaatgcactacggtggtggtaaacagagaaaattcaccccg
cgcggtgagtacaaagtttccaacctgaaaatgaaccttcatgcaggaaatacagatgtc
gggaagactcgcgcagatttaattcccgacatctcacacaagcaccgagttcgtaggaac
agcccgagagctaatattggggacaataaagtgaagttctccggctcacccaagagaagg
gagacgctacctctgagttactctcgagagggcatcacctcaccggctgggcgcagcaga
gtgacacggtccgaattgcgatggagcaacgaggacaggagagcggcgagttcgaggcag
gacgaactcaaactcaccagttcaaccttcgctttgaccggagattccgctcacaaccaa
gccatggtgcactggtctgggcaaaatagcagtgtgattctcatgctgaccaagctcttt
gacttcaacctgaacagtgtcacagagagctcattgtggaggtcaaccgactacggaacc
acttaccagaagctcaatgagaaagtggggacgaaaacaatcctcagctacttgtacgtc
agtcccaacaacaagaggaagatcatgcttctgactgacccagaggtggaaagcagcctg
ctgatcagctccgatgagggagccacctatcagaagtaccgcctcagcttctacatcctc
agcctgctcttccaccctgagcaggaggactggatccttgcctacagccatgaccagaag
ctgtacagctcggtggagtttggaaggaggtggcaacttgtccatgagagggtggccccc
aatcgattctactggtcaaaaacgggtttagacaaagaaccgggcttaattcacctggaa
accatcatctctgaaggacaggcgctgtacgtcacctgcaagctgcagaactgcactgag
gccaataagggcaagccgttccctggctacattgaccccaattcccttgtggtgcaagac
gagtatgtgtttgtccaggtgtcaactggtgggcgtccgatctactacgtgtcagccaag
cgggaagtcttcacacccatgaagctacccaaatacaccttgcctaaggatctgcatgtg
atcagtacggatgagaaccgggtggttgcggcggtgcaggagtggaaccagaacgacacc
tacaacctgtacgtgtcagagaatggaggggtcttctacaccttggccctggagaacgta
gtcagcagcatggggcacgagggcaacgtcatgatagacctgtatgaggtggcgggtata
aaagggatgttcctcgccaacaagaagatggacaacgtggtgaagacttatatcacctac
aacagagggagagactggaggctactgcaggctcccactgctgacctgaggggcaacagc
atccgctgtgaactaccatactgctccctacacctccacctacatgtatcggccaaccct
tacacgtcggggaatatcgagagcaaggactctgccccggggatcattgtggcctcaggc
tccatcggagcggagttgaccaccagcaacgtgagcatgttcatcacctcggacgccggc
aacacgtggagacagatctttgatgaggagtacagtgttctctacctggaccaaggagga
gccctggtggctataagacacactccactccccatccgacacctatggatgagtttcgac
gaggggagacagtggaataaatacagtttcaccatgtcgcccctgtttgtggacgggtta
ctaggggagccgggggaggagactctcatcatgacgatctttggccacgtcagtcaccgg
tccgagtggcagctggtcaagattgacttcaggtccatcttcaaccggagatgtacagag
ggcgattaccaaacatggcacctacacaaccggggcgagccgtgcatcatgggagtgaaa
agaatctacaggaagttgaagcccatagccaggtgcgttatgggtaagacatactcggtc
acgatgacctcggcgccctgcgactgcacagaggccgactttgagtgtgactatggctac
gagaggcggagtgacggcaagtgcacccctgccttttggttcctcccatcgtccatgtct
agaagctgtaccacagggactactttcatcaacagcactggctacaggaaggttgtgtcc
aataactgcacagcgggagtgatagcagagtacacggccaggaggcagcactgtcctacc
caggcccccaaaggcctgcacctcgtcaccagtgaaggaaagctgacagctacgctgggc
accaatgtcaccttcctggtgtttcttgaagagggcgacggagccaggacgagcatcatg
gtggacttcggggatggtcacgcactgacctactccaacgtgagctccatagaggatggg
gtcaagcacgtctacaaggctgtggggatctaccgtgtgaccgctacgggagagaacagc
ctggggtcggagagcgtggtgctgtacctccacgtcacatgtcagctggagtatatccat
ctctccgctccctttgtggcagtgaagagcaaggaagtcaacctcaccgctgtgctgtgg
cctagccaagtgggaacagtcacctacatctggtggttcggaaataacactgagccgata
atcaccctggaagggagcgtggcgtgcacattctcccaggaaggcgtcaacactgtcact
gtgcaggtgtccgctgggaacgccatcctgcaggaccggaaaaccatcgctgtccacgaa
tattccaggtcacatctactagccttctcatctaacctggatgaccacaaccccgacgtg
gccgaatggagactggacgtcagcagagtcatcaagaactccatggtcaaagccacaggg
gtgagcccagagcagctccttgtcaccgtcctaccagggttgcccacggcagcagaggtt
ttcctcctgccagacaaagagttaacggagggcaagccagagaagaactcagctcattta
gaccagctctctgaaatcttgcttagcgccctcaaccaaaacctggtccagttcaccctt
cggcctggggtccaggtcacagtatacgctgcacatttgtcagcagcgcccctagtggac
acgagtgagaaccacagcggttcggccatgctcatgctgctgtcggttgtggttctgggt
ttggcgatatttgtcgtctataaattcaaaaggaagatcccaggcctcaacgtctatgcg
cagatgcagaacgaaaaagaacaagaaatgatcccgagtccagtaagtccgacggaaagc
accctggtgtccccgaacactccgagggagctggtgacttctccggagcttatggacaca
gagttgaacatacggcccatcggatgcatcaaacctcacgcacatgtcaagttctcaacg
gaactccccacgtacatcaacgtttaa
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