Salmo trutta (river trout): 115147221
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Entry
115147221 CDS
T08542
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115147221
Membrane trafficking [BR:
stru04131
]
Endocytosis
Others
Others
115147221
Endosome - Lysosome transport
115147221
Endosome - Golgi transport
115147221
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
DUF7828
Motif
Other DBs
NCBI-GeneID:
115147221
NCBI-ProteinID:
XP_029545187
Ensembl:
ENSSTUG00000024658
LinkDB
All DBs
Position
14:complement(69710220..69946110)
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AA seq
1256 aa
AA seq
DB search
MDTWLGFCPGLHLTLCTWLLISAHTQLNAKAEITCASCQSPVQLHLKELQLDTGTHAADG
TRQAAKALEQVRLEYQLLGVTDQNTGVPSDTQQAGVLVDEPRFTDDGVTPKVVLEDLTGS
SENEERYRGEYNIGVDDLGKVKDGAEDVALRRAKRSGPEHPEFRESLRTGGPGLKGETSD
ERRSPGPLLDGHRLGRSEFKWNRDEGRGNSRGDDPKLSSTTFALTGDSAHNHAVVYWSGQ
NSSVILILTKLYDFHLGSVTESTLWRSTDYGSTYERMNDKVGSKTVLSYLYVCPSNKKKI
MVLTDPEFESSVLISSDEGASYQKYRLSFYILSLLFHPTQEDWALAYSHDQKLYASLDFG
RKWQLVHEHVNRFYWSVTGLDKESDLVHMEAHTPNGRIQYVTCQALICSEPNRNYPFPGY
IDISSLVVQDDYMFIQVTRAGQASYYVSYQRDPFLKIKLPKYSLPKDLHIVSTDEHQVFA
AVQEWNQNDTYNLYLSDTRGILFTLAMENVKTTRGLGGNQMLDLYEVAGIKGMLIANRRL
DNQVKTYITYNKGRDWRLLQAPATDLAGNDIHCILPFCSLHLQLQTSENPYLSGSISTKA
SAPGIIVATGNIGSELSYNNVGMFISSDAGNNWRQIFEEEHNVWFLDKGGALVAVKQPTV
PTRHLQISFDEGRQWTRHSFSLVPLFVDGMLVEAGTENQIMTFFGHFSHRSEWQLIKIDY
KSIFNRKCTEGDYQTWHLHNKGEPCVMGQKQIYMKRRPGNYCMLGKDYAKVLSAESCICR
AHDFECDYGYERRREGNCLPAFWFNPAVVSRSCSQGKNYLNSTGYRKVVSNNCIKGVKDM
YTPRKQMCPNRAPKGLSLSTREGKLTADLHTNVTFLVHLDEGDSLRTNIQLDFGDGTAVS
YSNLSWIEEGIRHVYKTAGIFRVSALAENTLGFDTTTLYLHVTCPVEHVQLLAPFVAIKN
KEVNLTAVVWPIHSRTLNYFWWLGNSTEPVISLDGSISYTFTSEGMNTVTVQVSSANAIL
QDTKTIAVQEFFKSLLLSFSPNLDEYNPDVPEWRQDVGRVIKKALLQVSDFQEDQLLVAV
FPGVPTAAELFLLPHKNQSEGRKKSEEELEQISEILASALNQNLVEFELKPGARVIVYIT
QLTLGKERTPLVDSIPRHSSSAMLMLLSVVFLGLAVFLIYKFKRKIPWMNIYAEVNQEKE
QEMIGSVSQSDSTPKTTFSEFSTPKEVKEKEMDARVKRRIGNACESTREIPNCTSV
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggatacttggcttggcttctgcccaggcttgcacttaactctgtgtacctggcttctg
atctccgctcatacccagctaaatgccaaggcggagataacttgcgcatcgtgccagtcg
ccggtccagctacacctgaaggaattacagctggataccggtacgcacgcggctgatggt
acgaggcaggcggccaaagctctggaacaggtccggctggagtaccagctactcggagtt
actgaccaaaatactggagtaccaagcgacacccaacaggcaggtgttctcgtggatgag
ccgagattcactgacgatggagttaccccaaaagtcgttctggaagatttaaccgggtct
agtgaaaacgaagaaaggtaccgtggtgaatataatattggggtggatgatttgggtaaa
gtcaaggatggtgctgaggatgttgcgttacggagagcgaagcgaagcggtcccgaacat
cccgagtttagggagagccttaggaccggtggccccggtttaaaaggagagacatcggat
gagagaaggagtcctggtccgttattggacggacacagactgggccgatccgaatttaag
tggaacagggacgagggtcgagggaattccagaggagatgatcccaaactaagcagcact
actttcgccttgaccggggactcagcgcataaccatgcagtggtttactggtcggggcaa
aacagcagcgtgatcctgattctgaccaaactttatgactttcacctggggagtgttaca
gagagcaccttgtggagatcaacagactatggctccacctatgagaggatgaatgacaaa
gtgggatctaagactgtgctcagttacctgtatgtctgtccatccaacaagaaaaagata
atggtgctgacagatcctgagtttgagagcagtgtgctcatcagctcggatgaaggagcg
agctatcagaaataccgcctcagtttctacattctaagccttctgttccatccaacacag
gaggattgggccctagcctacagccacgaccagaagttgtacgcctccctggactttggg
agaaaatggcagctggttcatgagcatgtgaacaggttctactggtctgtaacgggtcta
gacaaggagtcagatctggttcacatggaggcacacacccccaatggacgtatacagtat
gtaacatgccaggctctaatatgctcagagcccaacagaaactaccccttccctggatac
atcgacatcagctcactggtggttcaagatgactatatgtttattcaggttactagagca
ggacaggccagctactatgtgtcctaccagagggatccattcctcaaaatcaaactgcca
aaatattctctgcctaaggacctccacattgtcagcacagacgagcaccaggtgttcgcg
gcagtacaggagtggaaccaaaacgacacatacaacctgtacctctccgacacccggggc
atcctcttcaccctggccatggagaacgtcaagaccacccgcggcctggggggcaaccag
atgctggacctgtatgaggtagcaggtatcaaaggcatgctgatcgcaaacaggaggcta
gacaaccaggtgaagacctacatcacctacaacaaaggccgggattggaggttgctgcag
gccccggcaacagacctggctggcaacgacatccactgtatactgcccttctgttcgctc
catctccaactgcagacgtctgaaaacccctacctgtcaggcagcatatcaaccaaggcc
tcagcaccaggaatcatagtggccacagggaatattgggtctgagctgtcctacaataac
gttggaatgttcatctcatctgatgctggtaacaactggcgacagatattcgaggaggag
cacaacgtctggtttctggataaaggaggggcccttgtcgctgtaaaacaacctactgtc
cccaccagacatttacaaatcagttttgatgaggggcgtcagtggaccagacacagcttc
tccttggtgcctctgttcgtggacgggatgctggtggaggccgggacagagaaccagatc
atgacgttttttggacatttcagccataggtccgagtggcagcttatcaagatagactac
aagtccatcttcaacaggaaatgtacagaaggagactatcagacgtggcaccttcacaac
aagggcgagccgtgtgtgatgggccagaaacagatctatatgaaacgcagaccaggaaac
tattgcatgctgggaaaagactatgccaaagtcctctctgctgagtcgtgtatctgtcgg
gcccacgactttgaatgtgattatggctatgaacggcgtagagaagggaactgtctacca
gcgttctggttcaatccagctgttgtatcaaggagctgcagccaaggaaagaactacctc
aacagcacagggtaccgaaaagtggtgtccaacaactgcatcaaaggagtcaaggacatg
tacacacccaggaagcagatgtgtcccaacagggctccaaaaggcctttctctctccacc
agagagggcaagcttaccgccgacctgcacaccaacgtcaccttcctggtacatctggat
gagggtgactcattgagaaccaacatccaactggatttcggagatggcacggcagtctcc
tactccaacctgagctggatcgaagagggtatcagacatgtttacaagacggctgggata
ttccgtgtctcggccttggcggaaaacaccctgggatttgatactaccacgttgtacctc
catgttacgtgtcctgtggaacatgtccagttgctggctccatttgtggctatcaagaac
aaagaagtaaacctaacagcagtggtgtggcccatccactccaggaccctcaactacttc
tggtggctggggaacagcactgagccggtgatcagcttagatgggagcatctcgtacacc
ttcaccagcgagggaatgaacactgttacagtccaagtgtcttcagccaacgccatactg
caagacaccaagacgatagcagttcaagagttcttcaaatctctgcttttatctttctcc
cctaatctggacgagtacaaccctgatgtccccgagtggagacaggatgtggggagagtc
attaagaaggctctgctccaagtgtcagactttcaagaggatcagctattggttgcagtg
tttccaggtgtgccaacggccgctgagctcttcctgttaccacacaagaaccaatcagag
ggcaggaaaaagagcgaggaggagctagagcagatctctgagatacttgccagcgctctg
aaccagaatctggtggagtttgagctaaagccaggagcaagagtaattgtttacatcaca
cagctaactttgggtaaggaaagaacacccttggtggattccatcccgagacacagcagt
tcagccatgctgatgctcctatcagtagtattcctgggtttagcagtgtttctcatctac
aaattcaagagaaaaatcccctggatgaacatatacgcggaggtgaaccaggagaaagag
caggagatgatcggttcggttagccagagtgacagcacacctaagaccaccttcagtgag
ttctctacgcccaaagaagtcaaggagaaggagatggacgccagagttaaacgtcgaatt
ggaaatgcctgcgagagcacaagggagattcctaactgtactagcgtgtaa
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integrated database retrieval system
