Salmo trutta (river trout): 115147323
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Entry
115147323 CDS
T08542
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115147323
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115147323
Spliceosome [BR:
stru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
115147323
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
115147323
NCBI-ProteinID:
XP_029545370
Ensembl:
ENSSTUG00000030738
UniProt:
A0A674BXQ7
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Position
14:complement(72944404..72956730)
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AA seq
661 aa
AA seq
DB search
MRGSSSYGDRDRDRGRDRGPRFGSSSWGGPPPMKKFGNPGERLRKKKWDLDELPKFEKNF
YNEHPELQRMTPYDIDEFRRRKEITVSGTGCPRAITSFRQAQFPQYVMDVLLSQDFKEPT
SIQSQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRE
LAQQVQQVAHDYGKTSRIKSTCVYGGAPKGPQIRDLERGTEICIATPGRLIDFLEAGKTN
LRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKDVRQLAEDFLRDYV
QINVGALELSANHNILQIVDVCMENEKDNKLLQLMEEIMAEKENKTIIFVETKKRCDELT
RRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDIKFVINYDY
PNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQLVNSG
HGGGGGGRMRYRGGGSSANNPNMMFQDVCERRMRSVSGGNKPDSRGSSFSRDGRSGGGRD
GDTRSSSSSSYRDRSRVSRGSCGSGGADQYQSYGGGGGTQYSSRAGGAANGAPRGSSGGG
QNQSSQPQGVFGPAPPPPAGPKPLMAQLMAPPQPPLMGFIGQPPYSFAPPPPPPPTPPPR
K
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgagggggagttcgtcgtatggagaccgagatagagaccgtggacgagacagaggccct
cggtttgggtccagtagctggggcggccctccccctatgaagaagtttgggaaccctgga
gaacgccttcgcaagaagaagtgggatctggacgagctgcccaagtttgagaagaacttc
tacaacgagcacccagagctccagcgcatgactccgtatgacatagatgagttccgcagg
aggaaggagatcacagtcagcggtactggctgccccagggccatcaccagcttccgccaa
gcacagtttccccagtatgtaatggatgtgctactgagtcaggacttcaaggagcccaca
tccatccaatcacagggcttccctctggccctgagtggcagggacatggtgggcatcgct
cagaccggctccggcaagaccctggcatatctgcttcctgccattgtgcacatcaaccat
cagccctatctagagaggggagacggacctatttgcctggtcctggccccgaccagagag
ttggcccagcaggtgcagcaggtggctcatgattatggaaagacctcccgcatcaagagt
acctgtgtctatggaggagcacccaagggaccgcagatacgtgacctggagagaggtaca
gagatctgcatcgccaccccggggcgtctcatagacttcctggaggcagggaagaccaac
ctgcggcgctgcacctacctggtgctggacgaggctgaccgcatgctggacatgggcttc
gaaccacagatacgcaagatcgtggaccagatccggccggaccgccagactctgatgtgg
agtgccacctggcccaaggacgtgcgtcagctggcagaggacttcctgcgggattatgtc
cagatcaacgtaggagctctggagctcagcgccaaccacaacatcctgcagatagtagac
gtctgcatggagaacgagaaggacaacaagctgctccagctgatggaagagatcatggct
gagaaggagaacaagaccatcatctttgtggagacgaagaagcgctgtgatgagctcacc
cgcaggatgagaagagatgggtggccagccatgtgtatccatggggacaagagccagcca
gagagagactgggttctgacagaattccgtagcggcaaagctcctatcctcatcgccact
gatgtggcatctcgtggtctggacgtggaggatatcaagtttgtcatcaactatgactac
cccaactcgtctgaggactacgtgcataggatcggacgtacggcccgcagcaccaacaag
ggcacggcctataccttcttcaccccgggtaacctgcgccaggccagggacctggtccga
gttctggaggaggcccggcaggccatcaatcccaaactgctgcagctggttaactctgga
catgggggaggagggggtggcaggatgcgttaccgtggcggcggctccagcgccaacaac
cccaacatgatgttccaggacgtgtgtgagcgtcgcatgcgctccgtcagcgggggcaac
aagccagacagccgcggcagcagctttagtcgggacgggcgcagtggcgggggtcgggac
ggagacactaggtcctcatcctcttcctcctacagggaccgaagcagggtcagccggggg
agttgcggctccgggggggctgaccagtaccagagctatggtggtggtggtggtacccag
tacagctccagggctgggggggcagctaatggggcccctaggggtagtagtggtgggggc
cagaatcagtccagtcagccccagggtgtgttcggtccagctcctccacctccagcaggg
cccaagcccctcatggcccagctgatggccccgccacagccccctctcatgggcttcata
gggcagcctccgtactcctttgctcctcccccgccgccgcctcctacacccccacccagg
aagtag
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