KEGG   Salmo trutta (river trout): 115148336
Entry
115148336         CDS       T08542                                 
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec31A-like
  KO
K14005  protein transport protein SEC31
Organism
stru  Salmo trutta (river trout)
Pathway
stru04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    115148336
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:stru04131]
    115148336
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:stru02044]
    115148336
Membrane trafficking [BR:stru04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    115148336
Secretion system [BR:stru02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   115148336
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_EML_2 WD40 Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I SRA1 TPR_Sec16 WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N WD40_RFWD3 Prp18 TPR_GEMI5 Beta-prop_DCAF4 Beta-prop_HPS5 SAP_new25
Other DBs
NCBI-GeneID: 115148336
NCBI-ProteinID: XP_029546118
LinkDB
Position
15:complement(52483534..52526986)
AA seq 1497 aa
MKLKEINRTAIQSWSPAQHHPVYLAAGTSAQQLDASFSTTASLEIFELDLAEPSLDMKLR
GAYSSSHGYHRLAWGPHGMDEEGLPSGVLIAGGENGDVILYDPAKIIAGDSDVVIAQSNK
HIGPVRALEVHSFQTNLVASGGNESEIYIWDLNNFGSLMTPGPKTQPLEDISCVAWNRQI
QHILASASPSGRTSIWDLRKNDLIIKVSDHSNRMHCSGLEWNPEVATQLVLASEDDRMPV
IQIWDLRFTTSPLKVLENHTRGVLAMAWSLADPELLLSCGKDNRILCWNPNTAEVLYELP
TSTRWCFDIQWCPRNPAVLSAAAFDGHISVYSIMGGSSQVVSQTQADTISMSFGNMDPFG
MGQTLPPLQLPQASPYTITPLKKPPKWIRRPVGASFAFGGKLVSLENIKPSPQHPQQPTA
HVVHISQVITETTFLERSAQLQATLAAGSFTDFCQEKIDAAQNEFDKTVWSFLKVNLEND
ARGKYLELLGYKKEELAAKIAAALNGKPIQPEESAPAAEPTSEPISEHEPEVEPEPEVVP
EPSPAPQLSAETPVEPEVLPTVPEPAAIDLTPEPPLEPALQPKPEPKPELATSPCSDLSP
PMPVLQSEPVLTLDLSAEPQFLAPVALLPESDPTLAPLSSGPPQLWPPPLWPPPLTCSKY
LCLTYSMYSNSTRRTVQPQLQPVPDLTNLQPVPSFDPMPSVPTLQPLADPGRLRSADLPP
EDPFDLITAANLQQIAELDVTKSLEPVEAEVDLTESLEAEVDLTRDLALEAEAEPKTQEE
MPVVEESTPKEEEAAPVEAEAEASLPEEAPEPAPVQEGMDGLITQALLTGDFQGAMELCL
HDNRMADSIILAIAGGAELLEKTQRKYFTKAPSKITKLISAVVMRDWRDVLQTCELQNWK
EALAAVMTYAQPDEFSSLCDLLGCRLEAVEDNTLQAQACLCYICAGNMEKLVSCWTRAQD
RHCPLSLQDLVEKVLMLRQAVEQTQKPGPSAGGFLLGERMSQYVSLLASQGSLTTAIAYL
PQNTEQVAVQQLRDRLSRALGQQALATAPAPVVQVQPQPPTPFFAPQPTDAQSRQLFTPA
QPPMVPQLPAPAPARVPVAALAPHQYYQLVRSASTVTSWSNQTPTALPSVPPSLGPATTE
PKAEPTPPMYGTPPLGSAAPPASSAAAYPPMFSHQYQSYPPASQYNPGTLQYSAPPPPSF
SSSSPQAPAPGFMPQYTQQPLYQPPTMGQPLSSVPPSHPPFSPTSSFSPPLSSGAFFQHG
GPGSPASYMLPPPTGSSGPQNGWNEWNDPPTLSRVAKKKKVPANYNPPAPITAPIFSPLG
AGDPQPPQPMAPGQAQNQAPYQGPLPMNPGMPKTHGGNVEGAPGAPTADVIQALPLQSIP
AEKVTKKPIPEEHQVLKNTFEGLIQKCLAAAANTQTKRKLDDANKRLEALYDKLREQTLS
LAIVRGLHNMVQCIESHSYMESLNIHTHIVSSSNFSETSAFMPVLKVVLTQANKLGV
NT seq 4494 nt   +upstreamnt  +downstreamnt
atgaagctcaaagagatcaaccgcacagccatccagagctggagcccagcacagcaccac
cctgtgtacctggcagcaggtacgtcagcccagcagctggatgcctccttcagtaccact
gcctctctggagatctttgagctggacctggctgagccttctctggacatgaagctccgc
ggagcatactcctcctctcacggataccacaggctggcgtggggtccccacggcatggat
gaagagggtctcccgtccggagtgctcattgcagggggcgagaatggtgatgtcatcttg
tacgacccggccaagatcattgctggagacagtgacgttgtcatcgctcagagcaacaaa
cacattgggccggtcagagcccttgaagtccactccttccagaccaacctggtggcttca
ggaggtaacgaatcagagatctacatctgggacttgaacaactttggctccctgatgaca
ccaggccctaaaacgcagccactggaggacatcagctgtgtcgcgtggaacagacagatc
caacacatcctggcttcagccagccccagtggccgcacctccatctgggacctccgcaag
aacgacctcatcatcaaagtcagcgaccacagcaacaggatgcactgctcggggctggag
tggaacccagaggtagctactcagctggtgctggcctcagaggatgaccggatgccagtg
atccagatctgggacctgcgtttcaccacctcccctctcaaagtcctggagaaccacaca
cggggcgtcctggccatggcctggagtctggctgaccctgagctgctactgagctgtggg
aaagacaacagaatcctttgctggaaccccaacactgcagaggtgctgtatgagttgcct
accagtacccggtggtgctttgacatccagtggtgtcccaggaacccagcggtgctgtcg
gcagcagccttcgacggacacatcagcgtctactccatcatggggggcagcagccaggtt
gtcagccagacacaggcagacacaatcagcatgtcgtttggcaacatggatccgtttgga
atgggccagaccctgccccccctacagcttccccaagcctccccctacaccatcaccccc
ctcaaaaagccccccaagtggatccgcaggcccgtgggggcctccttcgcttttggtggt
aagctcgtgtcgttggagaacattaagcccagcccccagcaccctcagcagcccacggcc
catgtggttcacatcagtcaggtgatcaccgagacgaccttcctggagcgctcggcccag
ctgcaggccacgctggctgcaggcagcttcactgacttctgccaggagaagatcgatgct
gcccaaaacgagttcgacaagaccgtctggtccttcttgaaggtgaacttggagaatgac
gctcgtggaaaatacctggagcttttgggatacaagaaggaggagctagcagcaaagatt
gcagcagcattaaatggaaaacctattcagcccgaggagtctgctcctgctgctgaacct
acctctgaacctatctctgaacatgagcctgaggttgaacctgagccagaggtagtgcct
gaacccagtcccgctccccagctcagtgctgaaaccccggttgagcctgaggtccttcct
accgtacctgagcctgctgctatcgaccttacccccgaacctcctcttgaacccgctctc
cagcccaaacccgaacctaagccagagcttgccacctcaccctgcagtgacctttcacct
cctatgcctgtcctccaatctgagcctgtccttactcttgatctcagcgctgaaccccag
tttcttgctcctgttgctctcctgccagagtctgaccctactttggcccccctcagctct
ggcccccctcagctctggcccccaccgctctggcccccaccgctgacctgcagcaagtat
ctgtgtttgacgtacagcatgtattcgaattcgaccaggcggaccgtacagccccagcta
cagcctgtacctgacctcaccaacctgcagccagtacccagctttgacccaatgccatca
gtccccaccctgcagcctctagccgaccctggacgactccgctctgccgacctcccaccg
gaagatccgtttgacctcatcactgctgcaaacctccagcaaatagcggaactggacgtg
accaagtctctggaaccagtggaagcagaagtggacctgacagagtctctggaagcagaa
gtggacctgacaagggatttggcccttgaggctgaagctgagcccaagacccaggaagag
atgccagtagtagaagagagtactccgaaggaggaggaggcagcaccagtggaagcagag
gcagaggccagcctccctgaggaagcaccagaaccagctccagtccaagagggcatggac
ggcctgatcacccaggccctgctgaccggggacttccagggcgccatggaactctgtctc
catgacaaccgcatggccgacagcatcatcttagccatcgcgggaggggcggagcttctg
gagaaaacacagaggaagtacttcaccaaggctcccagcaagatcaccaagctgatcagt
gcagtggtgatgagggactggcgtgacgtgctgcagacctgtgagctgcagaactggaag
gaggctctggctgcagtcatgacctacgcccagcctgatgagttctcctctctgtgtgac
ctgctgggctgcagactggaggctgtggaggacaacacgctgcaggctcaggcctgtctg
tgttacatctgtgctggcaacatggagaaactggtgtcctgctggaccagagcacaggac
agacactgccctctgtctctgcaggacttggtagagaaggtgttgatgctacgccaggcg
gtagagcagacccagaagcctggtccctctgctggggggtttctactgggagagaggatg
agtcagtatgtcagcctgctggcctcccagggcagcctcaccaccgccatcgcatacctg
ccacagaacacagagcaggttgcagtgcagcagctgcgtgaccgtctcagcagagctctg
ggccaacaggctctagctacagccccggctccagtagtccaggtccagccccagccccca
acccccttctttgccccccagcccaccgatgcccagtccaggcagctcttcacccctgcc
cagcctcctatggtgccccagctgcccgctccagcaccagcccgtgtacccgtcgctgcc
ctcgcaccacatcagtattaccagctggtgaggtctgcctctacagtgacctcctggagt
aaccaaactcccacagctctccccagtgtccctccttctctaggccctgccaccacagag
cccaaggctgagccgacaccccccatgtatgggacgcctccccttgggtcagctgccccc
ccagcctcctcggccgccgcatacccccccatgttctcacatcagtaccagtcctaccct
ccggccagccagtacaaccctggcactcttcagtactctgctcctcctcctccctccttc
tcctcctcctcacctcaagccccagctccaggcttcatgccccagtacactcaacaaccc
ctctaccaacctcctaccatgggccagcctctgtcttccgttcctccttctcatcctcct
ttctctcctacttcctccttctcgcctcctctgtcctctggagcgtttttccaacatggc
gggccggggtcgcctgcctcgtacatgctgcctccaccaaccggatcctcaggccctcag
aacggctggaatgaatggaatgaccctcctaccctgagcagagtggcgaagaagaagaag
gttccagcgaactacaatcctcctgcccccatcacggcccccatcttttctccccttggt
gccggggacccccagcccccccagcccatggccccaggccaagcccagaaccaggcacca
taccagggccccctacccatgaaccctggcatgcccaagacacatggagggaatgtggag
ggagcgcccggagcccctactgcagatgtcatacaggcattgcccctgcagtccatacct
gctgagaaggtcactaagaagcccatccctgaggagcaccaggtcctgaagaacaccttt
gagggcctcattcagaagtgcttggctgctgccgcaaacacccaaaccaagaggaagctg
gatgacgccaacaagcgccttgaggccctctacgacaagctacgtgagcagacactctcc
ctggccatcgtacgaggcctgcacaacatggtgcaatgcatcgagtctcactcctacatg
gagagcctcaacatccacacacacatagtgagtagcagcaacttcagcgagacgtctgca
ttcatgcctgtgctcaaggtggttctgacacaagccaacaaactgggggtctga

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