Salmo trutta (river trout): 115148385
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Entry
115148385 CDS
T08542
Name
(RefSeq) transcription factor Sox-17-beta.2-like
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115148385
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115148385
SSDB
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Chlor_dismutase
Motif
Other DBs
NCBI-GeneID:
115148385
NCBI-ProteinID:
XP_029546146
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All DBs
Position
2:36434479..36435850
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AA seq
340 aa
AA seq
DB search
MSITSGVGEQPQSNIKGKKRYITMYFDRIPPHSDLCTTKAMLESDEFWGTSSQSEQMSEV
QSLGSVPSCHLSVNSDSSCSSPEPKPLAEPRVRRPLNAFIIWTKEERRRLAKLNPELENK
ELSKMLGKTWKAMSLAEKRPYMQEAECLRVQHTIDHPKYKYRPRRKKQLKKGPKALPVEA
LVPLNYLIQNQCHQQQAYPNPAIYPNSQAYFSHMPGTYPNRSNYPDPSSTFPNEPQEYSN
TGTYPAESHPYYSTQHGLQQCEAPSPAYAVSHWEQGDFMAQGLQLFSSTDLSLEFYLEQI
HLDMLYDLDRSEFEQYLSPPPCRPEPMEYSYHQQGSLREA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcactagtggagtaggagagcaacctcaaagcaacatcaaaggtaaaaaaaga
tacataaccatgtactttgatcggatccccccacattccgatctttgcacaacgaaagcc
atgcttgaaagcgacgagttctggggtacgtcttcccagagtgagcagatgtccgaggtg
cagtccctcggctctgtcccatcctgtcatctctcggtcaactccgactccagctgctct
agtcctgagccgaaaccattggcagagccacgggtcagaaggccgctgaacgcctttatt
atctggaccaaggaggagcgcagacggcttgccaaactcaaccctgaactagagaacaaa
gaactcagcaaaatgctcggtaaaacttggaaggccatgtctctggcagagaagcggccc
tacatgcaggaagcagagtgcctgagagtacagcacaccatcgaccaccccaagtacaag
taccggccccgcaggaagaagcagctgaagaagggccccaaagccctacctgtggaggcc
ctggtccctctcaactacctaatccagaaccagtgccatcagcagcaagcctacccaaac
ccagccatctacccaaactcccaggcatacttctcccatatgcccgggacctacccaaac
aggtccaattacccagacccatcatccacattccctaacgagcctcaagaatactctaac
acagggacatacccagcagagtctcatccatactactctacccagcatgggctgcagcag
tgtgaggcccccagcccagcttatgctgtgtctcattgggagcagggggacttcatggcc
cagggcctccagctgttctcctccactgacctctctctggagttctatctggagcagatt
cacctagatatgctgtatgatctggaccgcagtgagtttgaacagtacctgagcccgccc
ccatgcaggcctgagccaatggagtacagttatcaccagcaaggcagcctacgggaggcc
tga
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