Salmo trutta (river trout): 115148496
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Entry
115148496 CDS
T08542
Symbol
sox30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115148496 (sox30)
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115148496 (sox30)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
115148496
NCBI-ProteinID:
XP_029546286
Ensembl:
ENSSTUG00000011800
UniProt:
A0A673XX49
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Position
15:12336021..12347808
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AA seq
632 aa
AA seq
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MDRHPKRRAQMTFKKSEQSKNEDDSVPSKKHANESEGPASSTEWHRGDGEQKRPVGRPKG
SGRSGNSVSGDVQVRPKVIFKADSKCGGDGELMPTSSTHLKGTVQGRPVTFEKESASSLA
SKQSKATFDYPASQVLVIKEEIVTTAPGQAKVKVVQEPATTHRQGCPPVAPTIDFSKPIH
VVHENGMTFTVLDGKAITLSKVPYPPLVHVNVPPPPVKVKTRGMNLTMPPSEAENLEVPQ
SIDRNGYVKRPMNAFMVWARIHRPALSKANPTANNADISVQLGIEWSKLTEEEKRPYYVE
ARKLKDKHRQEFPGWIYQPRPGKRKCYPSVMSFAPEPSCCSAGTSGPAAESYPVTMMTMA
NTTTSSCVPYTQATGSNDHGVQVAITAAPNASQTTSPVSIFFQTTACPHPHPTAPTSGGK
PAERKHEATHSASNPEEASKPRKISRQQAYYNSASEMPSTSMASSSRGLQMPLPNMAHPH
MYPPSPLPHPVGLFPTPRFPFAPPYFMPGPNFYPPGSYPYLHSPYSYPVIQPQDFSNPMA
TPMATPGYPYDDNYDQHESTFSLLNRDYPFRQSGEGGQRCQGQAPTASELLGLVPPLDVR
ALENVFTNSASVQEVQVTNEEDKEEVRVMRIL
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggacaggcatcccaagcgaagagcgcaaatgacattcaagaaaagtgaacaaagtaaa
aacgaagacgacagtgtacctagtaagaaacatgcaaatgaaagcgagggacctgcatct
tcaactgagtggcatcgaggtgatggagaacagaaaagaccagtgggtaggcctaaaggc
agtggacgttctggaaatagtgttagtggagatgttcaggttaggcctaaagttattttt
aaagctgatagtaaatgtggtggtgatggagagctaatgcccacaagttcaacacacctc
aaaggaaccgttcaaggtcgaccagttacatttgaaaaggagagcgcatcatcattagcc
agtaaacagagtaaagccacatttgattatcccgcatctcaagtgctggtcatcaaggag
gagatcgtcacaactgctccaggtcaggccaaggtcaaagttgtccaagaacctgcaaca
acgcatcgtcaaggatgtccacctgtggctcccactatagacttctccaaaccgatccat
gttgtccacgaaaatgggatgaccttcacagttttggatggtaaagccataacgctcagc
aaagttccatacccaccacttgttcatgtgaatgttccgccacccccagtaaaggtgaag
actagagggatgaatctcaccatgccaccatcagaagcagaaaatcttgaagtaccacag
agcatagacaggaatggctacgtcaagaggcctatgaatgcgttcatggtctgggcgaga
atccacaggcctgccctgtccaaggccaacccaacggccaataacgcagacatcagtgtg
cagctaggaatagagtggagcaagctcactgaggaagagaagaggccctactatgttgaa
gcacgtaaactcaaagacaagcacagacaggagttcccaggttggatctatcagcccaga
cctggaaaaagaaagtgctacccttctgtgatgtcctttgctcctgaaccatcctgctgc
tctgcagggacaagtggtcctgcggctgagtcttatcccgtgaccatgatgactatggcc
aatactaccaccagctcctgtgttccatacacacaggccacaggctctaatgaccatggt
gtccaggtggctataacggccgctccaaatgcctctcagaccaccagcccagtctccata
ttcttccagactactgcctgcccacatccccacccaacagccccaacctctggtggtaag
cctgcagaacgcaagcatgaagccactcactctgccagcaatcctgaagaagcttccaaa
cccaggaaaatcagcaggcaacaggcctactacaattctgccagtgagatgccctcaaca
agcatggcatccagctccagaggtctccaaatgccactccctaacatggctcaccctcac
atgtatcctccatctcccttgccacatccagtgggcctcttccccacccctcgcttcccc
tttgctccgccctacttcatgcctggacccaatttttatccaccaggatcatacccttac
ctacacagcccatactcctacccagttatccaaccccaggatttctcaaaccccatggct
actcccatggctactccgggctacccctatgatgacaactacgatcagcatgagtccaca
ttttcccttctcaacagagactacccgtttcggcagagtggagagggcgggcagagatgt
caagggcaggcccccactgcctctgagctcctaggtttggtcccaccactggacgtacgt
gccctggagaacgtcttcaccaactctgccagtgtccaggaggtccaagtcaccaatgag
gaggacaaggaagaagtgcgcgtgatgagaattctctag
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