KEGG   Salmo trutta (river trout): 115148499
Entry
115148499         CDS       T08542                                 
Name
(RefSeq) endothelial PAS domain-containing protein 1-like
  KO
K08268  hypoxia-inducible factor 1 alpha
Organism
stru  Salmo trutta (river trout)
Pathway
stru04137  Mitophagy - animal
stru04140  Autophagy - animal
stru04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:stru00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    115148499
   04137 Mitophagy - animal
    115148499
   04148 Efferocytosis
    115148499
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:stru03000]
    115148499
Transcription factors [BR:stru03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    115148499
SSDB
Motif
Pfam: PAS_11 PAS_3 PAS PAS_4 PAS_9
Other DBs
NCBI-GeneID: 115148499
NCBI-ProteinID: XP_029546298
LinkDB
Position
2:51568053..51574988
AA seq 264 aa
MGETDLYLRILGGFVVVVTTEGDMIYLSDNIREYMGLTQVELMGHSIYDFTHPCDHKEIR
DNLDLTAGQNGCGGLRDFLMRMKCTVTHKGRTVNLRSAGWRVLQCRGCLKVCVSGPSLTC
VLFTCQPLSLTHTLLHTHTFTSHHSMDMRFTYCDQRVTGLLSYRPEELLGVSVYDLCHTL
DLHTLTKSHLNLCSKGQSVSGVYRVLVRGGGYMWAETHSAVISKPRPSHPHQSKPSPPLF
VACVTYILSGVEEPTQLLSLGQMT
NT seq 795 nt   +upstreamnt  +downstreamnt
atgggggagacagatctgtacctgaggattctgggcggctttgtcgtcgtggtaacgaca
gaaggagacatgatctacctgtcagataacatcagagaatacatgggtctaactcaggtg
gagttgatggggcatagcatatatgatttcacacacccctgtgaccataaggaaatcaga
gacaaccttgacctcactgcagggcagaacgggtgtggagggctgagagactttctgatg
aggatgaagtgtacagtgactcacaaaggaagaactgtcaacctccgatcagccggctgg
agggtgctgcagtgtcgagggtgtttgaaggtgtgtgtgtcaggaccctctcttacttgt
gtgctcttcacctgccagcccctgtccctcacacacacactcctacacacacacaccttc
accagccatcacagcatggacatgaggttcacttactgtgaccaaagggtgactgggttg
ttaagttatcgtccagaggagttgctgggtgtctctgtgtatgatctgtgtcacactctg
gacttacacactctgaccaaaagccacctaaacctgtgttctaagggtcagtcagtgagt
ggggtgtacagggtgttggttagagggggagggtacatgtgggcagagactcacagtgct
gtcatctccaaaccccgcccatcacatccacaccaatctaagccctcaccgccactcttc
gtcgcttgtgtcacttacatcctcagtggtgttgaggagccaactcagctgctgtctctg
ggccagatgacctga

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