Salmo trutta (river trout): 115148533
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Entry
115148533 CDS
T08542
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
stru
Salmo trutta (river trout)
Pathway
stru04080
Neuroactive ligand-receptor interaction
stru04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115148533
04082 Neuroactive ligand signaling
115148533
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115148533
Ion channels [BR:
stru04040
]
Ligand-gated channels
GABA-A
115148533
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
115148533
NCBI-ProteinID:
XP_029546351
Ensembl:
ENSSTUG00000020885
UniProt:
A0A673ZTL1
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Position
15:complement(14677521..14711462)
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AA seq
462 aa
AA seq
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MGGRTGTVILCVWACLLMANVLCGKSSGQNGQTDEQKDNTTVFTRILDRLLDGYDNRLRP
GLGERVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMSVLRLNNLMAS
KIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHLEDFPMDAHA
CPLKFGSYAYTRAEVVYVWTRGAAQSVVVAEDGSRLNQYDLMGQSVDSGVVQSSTGEYVV
MTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSIS
ARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKQKKKKE
SLLKKNNTTAYTAATATAFAPNIARDPGLATIAKSAPPPPTEPKEEPKPKPPEAKKTFNS
VSKIDRIARIAFPLLFGTFNLVYWATYLNKKPKLQGMTPGSH
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggtggacggacaggaacggtcatactatgtgtgtgggcctgtttgctgatggccaat
gtgctttgtgggaaaagctctggacagaatggccagacggatgagcagaaagacaacacg
acagtgttcacccggatcctagaccgtctcctggatggctatgacaatcgtctcagacca
gggttgggagagcgtgtaactgaagtcaagactgacattttcgtgacgagtattgggccc
gtctcggaccatgacatggaatacaccattgacgtgttctttcgtcaaagctggaaggac
gagcggctaaaatttaaaggtccaatgtctgttctccgtttgaacaacctaatggccagt
aaaatctggacccctgacacgttctttcacaatggcaagaagtctgtcgcccacaacatg
actatgcccaacaaactcctacgaatcacagaggagggaactctgctctacactatgaga
ctgacagtaagggcggagtgtcccatgcacctggaggacttccccatggacgcccatgct
tgtccactgaagtttggcagctatgcttacaccagggctgaggttgtgtacgtgtggacg
agaggggcagcccagtctgtcgtggtggctgaagatggctctcggctcaaccagtatgat
ctgatggggcaaagtgtggactctggggttgtccagtccagcacaggagagtatgttgtc
atgacgacacacttccatctgaagaggaagattggttattttgtcatccagacgtacctg
ccctgcatcatgacagtaatcctatcccaggtgtccttctggctcaacagagagtccgtc
ccagccaggacagtgttcggagtgacaactgtgctgaccatgactaccctcagtatcagc
gctaggaactctctcccaaaagtggcctacgccacagccatggactggttcattgcagtc
tgctatgcttttgtcttctctgccctcattgagtttgctacagtgaactatttcacaaag
aggggctatgcctgggacggaaaaagtgtggtgccagagaagcaaaagaagaagaaggag
tccctcttgaagaagaacaacaccaccgcctacaccgccgccactgctacagccttcgct
ccaaacattgccagggaccctggtttggccaccattgccaaaagcgccccccctcccccc
accgagcccaaggaggagcccaagcccaagccaccagaggccaagaagaccttcaacagc
gtcagcaagatcgacaggatcgccagaatagccttcccgttactcttcggaacctttaat
ctggtctactgggcaacttacttgaataaaaagcccaagttacaggggatgaccccggga
tcccactaa
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