Salmo trutta (river trout): 115148551
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Entry
115148551 CDS
T08542
Name
(RefSeq) interferon regulatory factor 1-like
KO
K09444
interferon regulatory factor 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
115148551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115148551
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
115148551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
115148551
NCBI-ProteinID:
XP_029546388
Ensembl:
ENSSTUG00000028958
LinkDB
All DBs
Position
15:complement(15899214..15903923)
Genome browser
AA seq
309 aa
AA seq
DB search
MPVSRMRMRPWLEEKIESNSISGLVWVDKDNKIFSVPWKHAARHGWDLNKDACLFKQWAM
HTGKFIQGETKTDPKTWKANFRCAMNSLPDIEEVKDKSINRGSGAVRVYKMKNIYSKPNN
KRSKANNVKKNKKIKTGGMAYSETNCPENLNTNTHLQEDSMTQESIVDSTGNLGDFTFAP
ECSTNVEIGPDSTNNFYASFQVSPDHSTDYEDGHQETLIGMTQHWEQSSVNDKGFLSNEV
GTAESFDTAESYHSPESQWSDNSETEIELRLYTELSSGLPIIDDILSYTDYWSLNNNTSS
YPQQITCPL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgtctaggatgagaatgaggccttggttggaggaaaagattgagtccaactcc
atcagtggattggtgtgggtggacaaggacaataagattttctccgtcccttggaagcat
gctgcacgtcatggatgggacttgaacaaggacgcatgtctgttcaagcaatgggctatg
cacacagggaaattcatacaaggcgagactaaaacagaccctaagacatggaaggcaaat
ttccgctgtgcaatgaactcccttcctgacatagaggaagtgaaagacaaaagcatcaac
agagggagtggagcagtgcgcgtctacaaaatgaagaacatctactctaaaccaaataac
aagaggtcaaaagcaaacaatgtaaagaaaaataagaagatcaagacagggggaatggcg
tacagcgaaaccaattgccccgagaacctcaataccaacacacacctgcaggaggacagt
atgacacaggaaagcatagtagacagcacaggcaacctaggtgattttacatttgctcca
gagtgttccaccaatgtggaaataggcccagacagcaccaacaacttctacgcatctttc
caagtgtcaccagaccactccacagactatgaagacggtcaccaagaaacccttattggg
atgacacagcattgggagcaaagcagtgtaaacgacaaggggttcctgagcaatgaagta
ggcacagcagagtccttcgacactgcagagtcttaccacagtccagagagccaatggagt
gataactcagaaacggaaatagagctgcggctgtacacagaactcagctcaggactaccg
atcattgacgacatcctctcttacaccgactactggtcactgaacaacaacacatccagt
tatccccaacagatcacatgcccactctga
DBGET
integrated database retrieval system
