Salmo trutta (river trout): 115148559
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Entry
115148559 CDS
T08542
Name
(RefSeq) lymphoid enhancer-binding factor 1-like isoform X1
KO
K02620
transcription factor 7
Organism
stru
Salmo trutta (river trout)
Pathway
stru04310
Wnt signaling pathway
stru04520
Adherens junction
stru04916
Melanogenesis
stru05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
115148559
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115148559
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
115148559
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115148559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115148559
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
115148559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
115148559
NCBI-ProteinID:
XP_029546406
Ensembl:
ENSSTUG00000002790
LinkDB
All DBs
Position
15:16814817..16883226
Genome browser
AA seq
508 aa
AA seq
DB search
MPQLSSGGGDDLGANDEMISFKDEGDQDEKIQENAFTERDLADLKSSLVNESETNQSPNA
AAVRRGQQNEHRGYQEKHREHLDGVSKHQDGGMYKTAYPGYPFLMLPDPYIPSGSVSPSS
NKVSVVQQSHGMHPLTSLLPYSNDHFNPSPPHLPTDMSQKGIHRPQSQDISGFYSLPQGG
VGQMPPSMGWQSQPVYPLSSCGFRQPYSSSLPNSSSYPRFSHSLMLGPGMHSTGIPHPAI
VPPSGKQDHHDRNMYAKPHQEPKREKEPKKPVIKKPLNAFMLYMKEMRAKVIAECTLKES
AAINQILGRRWHALTREEQAKYYELARKERQLHMQLYPSWSARDNYEAGLREGAGEKNKA
DWGKKKRRKREKQQDSTTDPGSPKKCRARFGLNQQTDWCGPCRRKKKCIRYLQGGWCASP
TSSDGSAIDSPPSPVDGVPPQHPSLPSSPSPASPSHIPLHPRPSKQHTPLILSKPKTTEL
SLKALIESSQQHDNLNHHHHDCTLPKSH
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagctcagtagcggcggaggagatgatctcggagcgaacgatgaaatgatatcc
tttaaggatgaaggcgatcaggatgagaaaattcaagaaaacgctttcacagaaagggac
ttagctgacctcaagtcgtctctggtgaatgaatccgagacaaatcaaagtccgaacgca
gcggcggtcagacggggacagcaaaacgaacacagaggttatcaagagaaacaccgggag
catcttgacggggtttccaaacatcaagatggaggaatgtataaaacagcgtatccgggg
tacccgtttctcatgctgcctgacccatacatccccagcggatcagtgtcaccgtcttcc
aacaaagtttcggtggtccagcagtctcacgggatgcaccccctgacgtccctgttgccg
tacagcaacgaccacttcaaccccagcccccctcacctgcccacagacatgagccagaaa
ggcattcacaggccccagtcccaggacatctcaggcttctactccctacctcagggcggt
gtgggacagatgcccccctccatgggctggcaaagtcagcctgtctatcccctgtcctca
tgtggattcagacagccctactcctccagtctccccaacagctcttcctaccccaggttc
tctcactctctgatgctagggccaggcatgcactcaacagggatcccccacccagccatc
gttccaccttcaggcaaacaggaccatcacgacaggaacatgtacgctaagccacaccag
gagcccaagcgggagaaggagcctaagaagccagtgatcaagaagcctctgaatgctttc
atgctgtacatgaaggagatgagggccaaggtgatcgctgagtgcacgctgaaggagagc
gctgccatcaaccagatacttggcagaaggtggcacgctctgacccgggaggagcaggcc
aaatactatgagctggccaggaaggagcggcagctacacatgcagctctaccccagctgg
tccgccagagacaactacgaggcgggccttagagagggcgcgggggaaaagaataaagct
gattggggcaagaagaagagaagaaaaagagagaagcagcaggactccaccacagaccct
ggctctcctaagaaatgcagagctcgcttcggcctcaaccaacaaacggactggtgtggt
ccctgcaggaggaaaaagaagtgcattcgataccttcaaggaggatggtgcgccagcccc
acttcttccgatggaagcgctatagactcgcccccctccccggtcgacggcgtcccccct
cagcacccctccctgcccagctcgccctcgcctgcttccccctcacacatccctctgcac
ccccggcccagcaaacaacacacaccccttatcctctcaaaacccaagaccacagaactc
tctctcaaagctttaatagaatcatcccaacagcacgacaatctcaatcatcatcatcat
gactgtaccctgcccaagtctcactag
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