Salmo trutta (river trout): 115148568
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Entry
115148568 CDS
T08542
Name
(RefSeq) protein transport protein Sec24A-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
stru
Salmo trutta (river trout)
Pathway
stru04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115148568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115148568
Membrane trafficking [BR:
stru04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
115148568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
115148568
NCBI-ProteinID:
XP_029546427
Ensembl:
ENSSTUG00000003280
LinkDB
All DBs
Position
15:17118074..17137058
Genome browser
AA seq
1125 aa
AA seq
DB search
MSGTDFSSQNGAGGPPYANGPSQNPVELQPPGPGYMAHQTPYNPMQAKGPMPPGPGLYNS
GPYQPIPPVSSNQALLGQPMLKRPPMGPQHSMTPPQSASPGPGSRMPPAHSTPPPVSANN
YQHPQAPAWQYGGTPPMGAPPSMGAPPPMAMPPLRPVGNHMTFSPSLATPQASSAEYSTA
PPVFHNASQTLGPPTSLQGYTQQGSAPLPMNPMAAPHSYQPPYGRPPPTTGPPMGNATPP
LGPKTDAQCGSDASVDASHTEYENQENDFESPGHMPTPGNGAQVPNSFDHLEMGPKMAGP
LPPQQPGPTRHMGLSYPSLPPGYQNTSAPPNAATMHNPMQPSTQPYTHPQPYQQPSAGPA
QLSPSLSGLSLQSQTPEALRVVNLLQERNLLPPGPVTPPTPCLPQDLQKINCHPEVFRST
LTSIPQTQSLLNKAKLPLGLLLHPFKDLSQLPVVTSSTIVRCRSCRTYINPFVTFLDQRR
WKCNLCYRVNDVPEEFMYNPVSRSYGEPHKRPEVQNATLEFIAPSEYMLRPPQPAVYLIV
LDVSHNAVETGYLDIVCQSLLENINALPGDSRTKIGFITFDSTIHFYNLQEGLSQPQMLI
VSDIEDIFLPTPDSLLVNLNECKELVQDLLKSLPQMFGKTMETQCALGPALQAAFKLLSA
TGGRVSVFQTQLPSLGVGALKSREDPNQRASAKDIQHLSPATDFYKKLALDCSGQQVAVD
LFLLSSQYCDLASLGCISRYSAGSVYYYPSYHQQHNPAGVECFQKDLKRYLTRKIGFEAV
MRIRCSKGLSIHTFHGNFFVRSTDLLSLPNVNPDAGFAVQMSIEENLVDMQSVSFQAALL
YTSSKGERRIRVHTMCLPVVNSLSDIFAGADVQAITCLLASMAVDRSVTASLSDAREAMT
NASIDSLTSFRTSVLTIQQPGLLAPACLRLFPLYILALLKQKAFRMGTSTRLDDRVFAMC
QLKYQPLVYVMLMIHPALYRVDDLTDEGALNISERTIPQPRVQQLSVEKLSRDGAFLMDA
GSVIYLWIGRNCNPNFLTQVLGLPNYAAVPLNMNMLPELDTAESQRTRAFVGWLREQRPF
FPILHVIRDESPLKASFLQNMIEDRTESALSYYEFLLHVQQQISK
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtacagattttagctctcagaatggggcaggaggaccgccgtacgcaaatggt
ccatcacagaatccagtagagctgcagccaccgggaccgggttacatggcccaccagact
ccatacaacccaatgcaagccaagggccctatgcctcccggccctggactctataactcc
ggtccctaccagcccatcccaccagtcagctctaaccaggcccttctaggtcagcccatg
ttaaaaaggcctcctatgggacctcaacattccatgaccccacctcagtctgccagccct
ggtccaggctccaggatgcccccagcgcattccacccctccacctgtgtctgctaacaac
taccagcacccccaagccccagcctggcagtatggggggactccaccgatgggagctcct
ccatcaatgggggcaccacctcctatggccatgcctccccttaggcctgtgggtaatcac
atgaccttctcgcccagcctggcaactccccaggcctcctcggcggagtacagcacagcg
ccacctgtcttccacaacgcctcgcaaaccctggggcctcccacctcgctccagggatac
acccagcaaggctctgcccctcttccgatgaaccccatggcggctcctcactcataccag
ccaccttacggccgccccccacccactactggaccccccatgggcaatgccacccctccc
cttggccccaagactgatgctcagtgtgggagtgatgctagtgttgatgcttcccacact
gagtacgagaaccaggagaatgattttgagagtccaggacacatgcccacacctggtaat
ggtgctcaagttcccaacagctttgatcacttggagatgggccctaaaatggctggccca
ctcccgccccagcagccaggccctactcgacacatgggtctgtcctacccctctctaccc
ccggggtaccagaacacctcggcaccccctaacgccgctaccatgcacaatcccatgcag
ccctcgacacagccttacacccatcctcagccataccagcagccctctgcaggtccagcc
caactgagcccctccttgtctggtttgagtctgcagtcccagaccccagaggccctgagg
gtggtcaacctgctgcaggagaggaacctgctccctccgggccccgtcacccctcctacg
ccctgcctgccccaggacctgcagaaaatcaactgccacccagaggtcttccgcagtacc
ctgaccagcatcccccagacccagtctctgttaaacaaagccaagctcccactcggcttg
ctcctccaccccttcaaagatctctcgcaactgcctgtggtcacctccagcactatagtg
aggtgtcgctcctgcaggacgtacatcaaccccttcgtgaccttcctggaccagaggaga
tggaagtgtaacctgtgctaccgggtcaacgacgttccagaggagttcatgtacaaccca
gtcagcagatcgtatggcgagccacacaaaagacctgaggtccagaatgccaccctcgag
ttcattgcaccatcagaatacatgctgagacctccccagcctgctgtttacctcatcgtg
ctggacgtatcccacaatgccgtggaaacaggatacctagatatcgtctgtcagtccctg
ctagagaacatcaatgcgctccctggggactcgaggacaaagattggcttcatcacattt
gacagcaccatccacttctacaacctccaggagggcctgtcccaaccacagatgcttata
gtctccgacatcgaagatatatttttaccaacaccagacagccttttagtgaacctcaac
gaatgcaaggagctggtgcaggatctgctgaagagcttgccccagatgtttggcaagacc
atggagacccagtgtgctctgggcccggccctgcaggcagcgttcaagctgctgtcggcc
acgggagggcgcgtgtccgtcttccagacccagctgcccagcctgggtgtgggggctctc
aagtccagagaggaccccaaccagagggcttcagccaaggatatccagcacctttctcct
gccacagacttctataagaagctggccctggactgttcaggacagcaggtggctgtggat
ctgttcctactgagctcccagtactgtgacctggcctctttaggttgcatatccaggtac
tcagcaggaagtgtgtactactacccctcctaccaccagcagcacaatccagccggggta
gagtgcttccagaaggatctcaagaggtacctcacccgcaagatcggcttcgaggctgtc
atgaggatacgctgctctaaaggtttgtccatccacacgttccatgggaacttcttcgtg
cgctccacggacctgctgtctctgcccaacgtcaacccggatgcaggcttcgctgtgcag
atgtccatcgaagagaacctggtggacatgcagtcggtctccttccaggctgctttgctc
tacacgtccagcaaaggagagagacgaatcagagtccacaccatgtgtttgcctgttgtc
aactccctatcagacatcttcgctggggctgatgtccaggccatcacttgtctgctggct
agcatggctgtggatcgttcagtgacggctagtttgagtgacgccagggaagcgatgacc
aacgcgtccatcgactctctgacgtccttccgcacctctgtactcaccatccagcagcct
ggcctcctggcccctgcctgcctcagactgttccccctctacatcctcgccctgctcaaa
cagaaagccttccgaatgggtacaagcaccagactggacgaccgtgtgtttgccatgtgt
cagctgaagtaccagcccctggtttacgtcatgctgatgatccacccagcgctgtaccgc
gtggacgatctgactgacgagggagccctgaacatcagtgagcgcaccatcccccagccc
agagtccagcagttgtctgtggagaagctgagcagagatggggccttcctcatggacgct
ggctcggtgatctatctctggattggaagaaactgcaaccccaacttcctcacgcaagtc
ctggggctcccaaactacgctgctgtgcctctgaacatgaacatgctcccagagttggac
actgcagagtcccagagaaccagagcgttcgttggctggctgagggaacagaggcccttc
ttccccatcctgcatgtcatcagggatgagagcccactgaaagccagcttcttgcagaac
atgatagaggatcggacagagtcggccttgtcttactatgagtttttactccacgtccaa
cagcaaatctccaagtaa
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