Salmo trutta (river trout): 115148605
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Entry
115148605 CDS
T08542
Name
(RefSeq) POU domain, class 2, transcription factor 3-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
stru
Salmo trutta (river trout)
Pathway
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115148605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115148605
03021 Transcription machinery [BR:
stru03021
]
115148605
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
115148605
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
115148605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
115148605
NCBI-ProteinID:
XP_029546504
Ensembl:
ENSSTUG00000008413
LinkDB
All DBs
Position
15:complement(21091954..21111058)
Genome browser
AA seq
468 aa
AA seq
DB search
MSWVPPTLRAKYFRTPLNSGEISCNFAMERRKHFVLLKTFCCNCTHFCHRAERTASCPSL
SHAVIQSATSCVGLFLETKDIEQRQIKTEDLNDSLHAVSSHKTCHPTQGSPIPCVQAGQL
SVELPSLHTMPQLVLMSGSHHLSSPASFLLSQTQHTGHQALLQQNLHNFPTQSQSGLLQH
QPGLALTPQAMSRSGLTSSSMEGHVDMSHLQVPKHIGAPQQDDPSDLEELEQFAKAFKQR
RIKLGFTQGDVGLDMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAENSPS
DSMANVASLPPLMEGYGRKRKKRTSIETNIKFTLEKRFLDNPKPNSEEITLISEQLSMEK
EVVRVWFCNRRQKEKRIYCPVSTSPMKSHNFNPRMPSCNTLFQGSASRSYSPLASGGVSS
SPSPNSPSHGPSLGTLSSGSTALTSQVNQSFSSPGSWYRTWNPMPYPH
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgagttgggtcccccccaccttgcgagcaaaatattttaggaccccacttaacagtgga
gagatatcctgcaattttgccatggaaagaagaaaacattttgtacttttaaagacattt
tgctgcaattgtacacatttttgccatagggcggagaggaccgccagttgcccatccctg
agccatgctgttatccagagcgctacttcatgtgtaggcctgttcttagaaacaaaagac
attgaacaacgacaaatcaaaacagaggacctcaacgactctctccatgcagtctcatca
cacaaaacatgtcacccgacacaaggatccccaataccttgtgtccaggcaggccagcta
tcagtggagctcccctccctccacaccatgccgcagctggtgcttatgtcagggtctcac
cacctctcatcccccgcctccttcctactctcacagacacaacacacggggcatcaagca
cttctgcagcagaacctgcacaactttcccacccagagccagtcaggtctcctccagcac
cagcctgggttagcactaacacctcaggccatgagtcggtcgggcctgacgtcgtcgtcc
atggaaggacacgtggacatgtcccacctgcaggtccccaaacacatcggggccccccag
caggacgatcccagcgacctagaggagctggaacagtttgccaaggccttcaaacagaga
cgcattaaactgggcttcacccagggtgatgtaggcctggatatggggaaattgtatggg
aatgacttcagtcagactaccatctcccgcttcgaggcactcaacctgagcttcaaaaat
atgtgcaagttgaagccgctactggagaagtggctgagcgacgcagagaattctccctct
gactctatggccaacgttgcctctctaccccccctgatggaaggctatggaaggaaaagg
aaaaagagaacaagcattgaaaccaacatcaagttcaccctggagaaacgctttcttgac
aaccccaagcctaactcggaggagatcacgctgatctcagagcagctgtctatggagaag
gaggtggtgcgggtgtggttctgtaaccgtagacagaaggaaaagaggatctactgccct
gtgtccacatcacccatgaaatcacataacttcaatcccagaatgccttcatgtaacacc
ctgtttcagggctccgcgtccagatcatacagccctcttgcttcaggaggagtgtcatct
agtccctctcctaatagtcctagccatgggccttcgctcggcacactctcgtctggctcc
actgctttgacctcccaggtcaaccaatccttcagctcaccagggtcgtggtatcgcaca
tggaaccctatgccctatccccactga
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