KEGG   Salmo trutta (river trout): 115148624
Entry
115148624         CDS       T08542                                 
Name
(RefSeq) cullin-5-like isoform X1
  KO
K10612  cullin 5
Organism
stru  Salmo trutta (river trout)
Pathway
stru04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    115148624
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:stru04121]
    115148624
   03400 DNA repair and recombination proteins [BR:stru03400]
    115148624
Ubiquitin system [BR:stru04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     115148624
DNA repair and recombination proteins [BR:stru03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     115148624
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 115148624
NCBI-ProteinID: XP_029546542
Ensembl: ENSSTUG00000010323
LinkDB
Position
15:22178543..22229312
AA seq 824 aa
MFTVLNMATSNLLKNKGSLQFEDKWDLMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWD
DKGPAKIHQALKADILDFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQL
EITLMGKQGSNKKSNVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDS
QLVIGVRESYVNLCSNPDNKLQIYRDNFEKAYMDSTERFYRTQAPSYLQQNGVQNYMKYA
DTKLREEEKRALRYLETRRECNSVQALMECCVNALVTSFKETILAECPGMIRRNETESEY
GRSAPGTKGSASSELHLMFSLMDKVPSGIEPMLKDLEEHIMSAGLADMVASAETITSDSE
KYVEQLLILFNRFSKLVKDAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKT
QPESKCPELLANYCDMLLRKTPLSKKLASEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHL
TRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQNFKECHKHNK
LALSGRLSLIQTADDLNTGAVDQALKTDSVNIKILNAGAWSRSSEKVFVSLPTELEDLIP
EVEDFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPRERISF
ENLKLATELPDAELRRTLWSLVAFPKLKRQVLSYDPVVGSPKDFAEGTLFYVNQEFSLIK
NSKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKRITNAQLQT
ELVEILKNMFLPQKKMIKEQMEWLIEHKYIKRDETDLNTFIYMA
NT seq 2475 nt   +upstreamnt  +downstreamnt
atgttcacagtcctgaacatggcgacgtctaatttgctaaagaacaaaggctccctccag
ttcgaggacaagtgggatttgatgcgtcccatcgttctgaagctgctccgtcaggagtca
gtcaccaagcagcagtggtttgacctcttctcagatgtccatgcagtatgcctatgggat
gacaagggaccggccaagatccaccaggccctgaaggcagacatcttagacttcatcaag
caagcacaagcgcgggtgttgagtcaccaggacgacacggcactgctgaaggcctacatc
gtggagtggaggaagttcttcacacagtgcgacatcctgcccaaacccttctgccagctg
gagatcacgctcatgggcaaacagggcagcaacaagaagtcgaacgtagaggacagcatc
gtacggaagctcatgctggacacgtggaacgagtccatcttctccaacatcaagaacagg
ctgcaggacagcgccatgaagctggtgcacgccgaacgcctgggggaggccttcgactct
caactggtcatcggcgtcagggagtcctacgtgaacctgtgctcaaacccagacaacaag
ttgcagatctacagagataactttgagaaggcctacatggactccaccgagagattctac
agaacacaggccccctcctacctgcagcagaacggagtacagaactacatgaaatatgca
gacaccaagttgagagaggaggagaaacgggcgttgcgctatttggagacgagacgtgaa
tgtaactctgtacaagcactgatggagtgttgcgtgaacgccctggtgacgtccttcaag
gagaccatcttggccgagtgtccaggcatgatcaggcgaaacgagaccgagagtgagtac
ggccggagcgctcccgggaccaaaggctcggccagctcagagctccatctcatgttctct
ctgatggacaaggtgcctagtggcatcgagccaatgctgaaggacttagaggaacacatc
atgtctgctgggctggccgacatggtggcctccgccgagaccatcacctcggactctgag
aagtacgtggagcagctcctcatcctgttcaaccgcttcagtaagctggttaaagatgcc
tttcaggacgaccctcgcttcctcacagcccgagacaaggcttacaaagcagttgtgaat
gacgctactatttttaaattggaacttccgctgaagcagaaaggggtggggctgaagact
cagccagagtccaagtgtccagagttgctggccaactactgtgatatgctgctgaggaaa
accccgctgagcaagaaacttgcatctgaggagatcgaggccaagctcaaggaagtgttg
ctggtgttgaagtacgtgcagaacaaagacgtgttcatgcgctaccacaaagcccatctg
acccgacgccttatcctggacatctccgctgacagcgaaatcgaggagaacatggtggag
tggctccgggaggtaggcatgcctgctgactacgtgaataagctggctcggatgttccag
gacatcaaggtgtccgaggacctcaaccagaacttcaaagagtgtcacaaacacaacaag
ctggccctatcaggaaggttatcgctaatccaaacagcagatgacttaaacacgggagca
gtggaccaggccttgaagacggactctgtcaacatcaagatcctgaatgcgggggcatgg
tcgcggagctcagagaaggtgtttgtgtcactgcccactgagctggaggacctgatcccc
gaggtggaggacttttacaagaagaaccacagtggcagaaaactgcactggcatcacctc
atgtccaatggcattatcacatttaagaatgaggtgggccagtacgacctggaggtgacc
accttccaactggctgtgctgtttgcctggaaccagaggccgcgggagaggatcagcttt
gagaaccttaagctggccacggagcttcctgatgccgagctccgacgcaccctctggtcc
ctggtagcattccccaagctaaagcggcaggtgttgtcctacgacccagtggtgggttcg
cccaaagactttgcagagggcaccctcttctatgtcaatcaggagttttcactaataaaa
aactccaaggtccaaaaaagggggaagattaacctaattggccgccttcagctcaccaca
gaacgaatgagggaggaggagaacgagggaatcgtccagctcaggatattgagaacacag
gaggccatcatccagatcatgaagatgcgcaagcggatcaccaacgcccagctgcagaca
gagctggtcgagatcctcaaaaacatgttcctacctcagaagaagatgatcaaggagcag
atggagtggctcattgagcacaagtacatcaagcgggacgagacggatctcaacactttc
atctacatggcgtaa

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