Salmo trutta (river trout): 115148696
Help
Entry
115148696 CDS
T08542
Name
(RefSeq) neural cell adhesion molecule 1-like isoform X1
KO
K06491
neural cell adhesion molecule
Organism
stru
Salmo trutta (river trout)
Pathway
stru03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
stru04514
Cell adhesion molecule (CAM) interaction
stru04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
115148696
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115148696
04517 IgSF CAM signaling
115148696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115148696
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115148696
04090 CD molecules [BR:
stru04090
]
115148696
00536 Glycosaminoglycan binding proteins [BR:
stru00536
]
115148696
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
stru00537
]
115148696
04091 Lectins [BR:
stru04091
]
115148696
Membrane trafficking [BR:
stru04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
115148696
Cell adhesion molecules [BR:
stru04515
]
Immunoglobulin superfamily
NCAM1/2
115148696
CD molecules [BR:
stru04090
]
Proteins
115148696
Glycosaminoglycan binding proteins [BR:
stru00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
115148696
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
stru00537
]
Others
115148696
Lectins [BR:
stru04091
]
I-type lectins (Siglecs)
115148696
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Ig_VEGFR-1-like_5th
V-set
VEGFR1-3_N_Ig-like
FN3_DSCAM-DSCAML_C
Ig_PDGFR_d4
V-set_CD47
Ig_5
C2-set_2
C1-set
C2-set_3
Big_10
Motif
Other DBs
NCBI-GeneID:
115148696
NCBI-ProteinID:
XP_029546674
Ensembl:
ENSSTUG00000018705
LinkDB
All DBs
Position
15:27639138..27933149
Genome browser
AA seq
1061 aa
AA seq
DB search
MLQTRYLIWALLFGYAASLQVEITPMQGEISMGESKFFLCEVVGDVKDIDWYAPNGEKLL
PNRQDILVNRNDESSSTLTIYNANVDNAGIYKCVAKNGDKESQGTVNVKIFQKITFKNAP
SPQEFNEGDDADIICDVVSSPPADIIWKHKGSKIQVAKDVRFKILTSNHLQIRGIKKTDE
GAYTCEARVMTRGEIDLKIIKVIVNVLPSIRTRQSEVNATADVNQSVMLACDADGFPEPT
VTWARNNIVLESDDKYGLNNDGSELIIKDVKKVDEGDYTCIARNKAGEKEEEVSLNVFVQ
PKITYLVNQTASELEEQITLTCEASGDPTPTITWSFGRRIFTEGEQASWTRPETYESLDG
NVVVRSHARVSSLTLKYVQFTDAGHYLCTARNSIGQDQQTMYLEVRYAPKIQGSVTVYTW
EGNAANISCEVLAHPGASVVWFRDGQQLSSTNTTNVKIYNTPAVSYLEVTPDSQNDFGSY
NCTATNMIGAESKEFLLIQADVPSAPAIERVEPFSSTAVVEFEEPDASGGVAILKYRAEW
RMQGEDWTGREYDAEEGLSMITIVGLKPETFYEVKMSAINGKGEGESSPPQNFKTEPVRY
AFTISSVTPTFIPSTSAALKGEPSPPKLEGKLQTTGNALKVNWIKQDDGGSPIKHYLIRY
RAKHVPDWKPEIRLPNGSEYVVLNSLDWNTEYEVYVVAENQQGKSQPGTLSFTTAAEPTA
IPDTMDSGSGLGTGAIVGILIVVFVLLLVGVDVTCYFLNKCGLVMCIAVNFCGKSGPGAK
SKDLEEGKAAFTKDESKGPIVEVRTEEERTPNHEGGGATEPNETTPLTEPEPAADTTATV
VDLLPSVATNSEPVTESFSTTQNSPASESTTLTSSAAGPTPVLAESKTAPKTSPKSTPAP
IPQSSTPKPSTPAPQHAAQSDMAPLVDLSEAPKATPSSDPKPPTPTAPSSKPVKVPSNPP
SATADAAPQSQPESVQSPSATSSQNKDLQIDGLAKDVFDAPSKGSKAPADSTAAPAQDDG
KIVTDDKSKAPEKATEVKKALSEVKTVPNEAAKTNGNESKA
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaacaaggtatctcatctgggcattgctctttggctatgcagcctccctgcag
gtggagatcaccccgatgcaaggagagatcagtatgggggagtcaaaattcttcctctgc
gaagttgtcggagatgtaaaggacattgattggtatgccccgaacggcgagaagctccta
ccaaacagacaggacatcctcgtgaaccgcaacgacgagtcctcgtccactctcacgatc
tataacgccaacgtggacaatgccggcatctacaagtgtgttgccaaaaatggagacaag
gagtctcagggcaccgtcaacgttaaaatcttccaaaagataaccttcaagaacgcccct
tccccacaggagttcaatgaaggggatgacgctgatatcatctgtgacgtcgtcagctcg
cctcccgctgacatcatctggaagcacaaaggctcaaagatccaggttgcaaaagacgtt
cgatttaagatcctgaccagcaaccacctccagatccgaggcatcaagaaaacagatgaa
ggggcgtacacctgtgaggctcgtgtaatgaccaggggagagattgacctgaagatcatc
aaggtcattgtcaacgtgctccctagcatccgcaccaggcagtcggaggtgaatgccacg
gcggacgtcaaccagtctgtgatgctggcctgtgacgctgacggcttccctgaacccaca
gtcacctgggcccgtaacaacattgtccttgaatcggacgataagtacggcctgaacaac
gacggctcggagctgataataaaggatgtcaagaaagtggatgaaggagattacacatgc
atcgcccggaacaaggccggggagaaagaggaggaagtcagcttgaatgtgttcgtgcaa
cctaagatcacctacctggtcaaccagactgcatcagagctggaggagcaaatcaccctg
acctgcgaggcctcaggagaccccacccccaccatcacctggagctttggccgcaggatc
ttcacagagggagagcaggcttcttggactcggcctgagacatacgagagtcttgatggg
aatgttgtggtgcgtagtcacgcaagggtttcctctctcaccttgaagtatgtccagttc
accgatgccggccactacctctgcactgcccgcaactccatcggtcaagaccagcagacc
atgtacctggaagtacgctatgctcccaagatccagggctcggtgacggtctacacctgg
gaagggaacgcagccaacatcagctgtgaggtgctggctcatccgggagcctcagtggtg
tggttcagagatggccagcagctgtctagcactaacaccaccaacgtcaagatctacaac
acaccagctgtcagctacctcgaggtcaccccagattcccagaatgactttggaagctac
aactgcacagctaccaacatgatcggagcagagtccaaggagttcctcctgatccaagca
gatgtgccgtcggcacccgccatcgagcgagtggagcccttctccagcaccgccgttgtg
gagtttgaggagcccgatgccagcggcggcgttgccatcctcaagtaccgggcagagtgg
cgcatgcagggtgaagactggaccggcagggagtacgacgcagaggagggcctgagcatg
atcaccatcgttggcctgaagcccgagaccttctatgaggtcaagatgtccgccatcaac
ggcaagggcgagggcgagagcagccctccccagaacttcaagactgagccagtccgctat
gctttcacaatttcgtcagtgacaccaaccttcattccttcaacaagtgcggcccttaaa
ggggagcccagtccccctaaactggaaggcaagctgcagaccacgggcaacgccctcaag
gtcaactggatcaagcaggatgatggaggctcgcccatcaaacactacctgataagatac
agggctaagcacgttccggactggaagccggagatccgcctgcccaacggcagtgagtac
gtggtgctgaacagcctagattggaacacggagtatgaagtctacgtggtggccgagaac
cagcagggcaagtcgcagcccggcaccctctccttcacgactgcagcagagcccaccgcc
atcccagacactatggatagcggctcaggcctaggcacgggggccatcgtggggatcctc
attgtggtatttgtgctgctgctggtgggcgtcgacgtcacctgctacttcctcaacaag
tgcggcctcgtcatgtgcattgccgtcaacttctgcggcaagtccggacccggagccaag
agcaaggacctcgaggagggcaaggcggcgttcacgaaggatgagtccaaggggcccatt
gtggaggtgaggacggaggaggagcgcactcctaaccatgaaggggggggggccacagag
cctaacgagaccacccctctgactgagcctgagcccgctgctgacactaccgccacggtg
gtggacttgctcccttctgtcgccactaactctgaacctgtcactgagagctttagcaca
acccagaacagcccagctagcgagagcaccactctcacttccagcgcagctggcccaacc
cctgtcctggctgagtccaaaactgcccccaaaacctcccctaaaagcactcctgccccc
atcccccagtccagcacgcccaaacctagcacccccgccccccagcatgccgcccaatcc
gacatggctcccctcgttgacctaagcgaagctcctaaagccacaccctcgtccgacccc
aagccccccacccccacagccccatcctcgaagccagtcaaggtcccctccaaccccccc
tctgccacagccgatgccgcaccacagagccagcccgagtctgtccaaagcccctccgcc
accagcagtcagaataaggacttacagatagacggcctggccaaggatgtgtttgatgcc
ccaagcaaaggctccaaggccccagcagactccactgctgcacccgcccaggacgacggc
aaaatcgtgacagacgataaaagtaaagcgccggagaaggcgacagaggtgaagaaagcc
ctgtcggaggtgaagacagtccccaacgaagctgcaaagacaaatggtaacgagagcaaa
gcatga
DBGET
integrated database retrieval system
