Salmo trutta (river trout): 115148701
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Entry
115148701 CDS
T08542
Symbol
ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10 isoform X1
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stru03009
]
115148701 (ddx10)
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115148701 (ddx10)
Ribosome biogenesis [BR:
stru03009
]
Eukaryotic type
90S particles
Helicases
115148701 (ddx10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
Motif
Other DBs
NCBI-GeneID:
115148701
NCBI-ProteinID:
XP_029546693
Ensembl:
ENSSTUG00000022998
UniProt:
A0A674A5P0
LinkDB
All DBs
Position
15:28169558..28240106
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AA seq
860 aa
AA seq
DB search
MDKGKRPNVSPNKKMGKKNPTDTIDPVKNFERWKKKYNKTKTRVKQEKRQKRKPEWQVEK
EVIQRLVNKYNEINAKDAERFSDFPISKNTLRGLMEAQYRQPTEIQRQTIGFALQGKDVL
GAAKTGSGKTLAFLIPVLECLYRQQWTAMDGLGALIISPTRELAYQTFEVLRKVGKNHEF
SAGLIIGGKDLKNESEKIHRTNIIICTPGRLLQHMDETAAFHASDLHMLVLDEADRILDM
GFADTINAIVENLPKTRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLEQ
NYVVCELHQKVNMLFSFIRSHLQKKVIVFFACCKEVQYLFRVFCRLRPGMPILALHGKQQ
QMKRVEVYNDFIKKKNAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRVGRTARYK
EGGEALLVLLPSEEKEMLSQLQEKKVPINRIQVNPEKLTSVQQKLEAFLAQEKEQKERAQ
RCFVSYLRSVYLMKNKDVFDVFQLKLQEYAASLGLAVAPRVRFLNKVQKQRADPGQSGAP
GDVAQYEEEKELKNFKAQLRGDGRMSEAQESQSSHEEDDDDDEEEDEEKLQPGPKGLIFG
ADETEEDEDMRDLDLLTVKRKDIFSLEEVDQDDEETDSNTIKKTEKETKFKEAKKVLKRN
FQVNTKLVFTEEGQMVQQWPPLQRTAVPATEGEEDDCTSGINVEEARERLRREDQEYDKL
EYRRKVKEKHREKRLKENAARREASKQYTEEQKSSEEEDEEEVVAYLGGSDGEEFDPSTL
PDPDKLHYDSEEEDDQISPAAGTRKRIRSDRIDDSGEEEEEEAAGSRKRPRQQATAKPLD
TGLSLAEDEALVLHLLGNQS
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggacaagggcaaacgaccaaacgtgtcccccaataaaaaaatgggaaagaaaaaccca
accgacaccattgaccctgtgaagaacttcgagcgatggaagaagaaatacaacaagacg
aaaacacgagttaaacaagagaaaagacagaaaaggaaacctgaatggcaggtggagaaa
gaagttattcaacggcttgtcaacaaatataacgagataaatgccaaggatgctgagagg
ttttcagatttccccatctcaaagaataccttgcgaggtctgatggaagcacagtatcgt
cagcccacagaaatacagagacagaccattggctttgcgttgcaaggtaaagatgttctg
ggtgctgcaaagactggctctggaaaaacactggcctttctcattcctgtattggagtgt
ttgtatcgtcagcagtggacagccatggatggcctgggggccctcatcatctccccgaca
cgagagctggcctatcagaccttcgaggtgctccgtaaagtgggcaagaaccacgagttc
tctgccggcctcatcattggcggaaaggacctgaaaaatgagtctgagaagatccaccgc
accaacatcatcatctgcacgccaggacgcctgctccagcacatggacgagactgctgcg
ttccacgcctccgatctgcacatgctagttttggatgaggcggatcgtatcctggacatg
ggttttgccgacactatcaacgccatagtggagaacctccccaagacccgtcagacactg
ttgttctcagccacacagaccaagtcagtgaaagacctggcccgcctcagcctcaaagac
ccagagtatgtctgggtgcacgagaaggccaagttcagcacgccggccacgctggagcag
aactacgtggtgtgtgagctgcaccagaaagtcaacatgctcttctccttcatcaggagc
cacctgcagaagaaagtcatcgtcttcttcgcctgttgcaaagaagtccaatacctgttc
cgggtgttctgtcggctgcgtccgggcatgcccatcctggccctgcatgggaagcaacag
cagatgaagagggtggaggtctacaatgacttcatcaagaagaagaacgctgttctcttc
gccacagacattgcagccagaggcctagacttccctgccgtgaactgggtgttgcagttt
gactgtccagaggatgccaacacatacatccacagagtgggacgaaccgccaggtataag
gagggaggagaggctctgcttgtcctgctgccctcagaagagaaggaaatgctatcccag
ctccaggagaagaaagtccccatcaacagaattcaggtgaacccagagaagctgacgagc
gtgcagcagaagctggaggccttcctggcccaggagaaggaacagaaggagcgagcacag
aggtgtttcgtctcctacctgcgctccgtctacctcatgaaaaacaaagacgtctttgat
gtgttccagctcaagctccaggagtatgcagcttctctgggcctcgctgttgctccaagg
gtgcgttttctcaacaaagtccagaagcagagagcagaccctgggcagagtggcgcgccg
ggagatgtggcccagtatgaggaggagaaggaactaaagaacttcaaggctcagctcaga
ggagacgggcgcatgtccgaagctcaagaatcccaaagctcacatgaggaagatgatgat
gatgatgaggaggaggacgaggaaaagttacagcctggtcctaagggtctcatcttcggg
gcagatgaaactgaggaggatgaagatatgagggacttggacctgctcacagtgaagaga
aaagatatcttcagtctggaggaagttgaccaggatgatgaggaaactgacagtaacacc
attaagaaaacagaaaaagagaccaagttcaaggaggccaagaaagtcctgaagagaaac
ttccaagtcaacaccaaattagtcttcactgaagagggacagatggtgcagcaatggccc
ccgctccagaggacggccgtgccagccacagagggggaggaggatgattgcacgtcaggc
atcaatgtggaggaggccagagagaggctgcgtcgagaggaccaggagtatgacaagctg
gagtacagacgtaaagtcaaagagaaacacagggagaagagactgaaggagaacgctgcc
agaagagaagccagcaagcagtacactgaggagcagaaatccagtgaggaggaggatgaa
gaggaggtggtagcgtacctgggcggttctgatggagaagagtttgaccccagcacactg
cccgacccggacaaactacactacgactcagaggaagaagacgaccagatcagccctgct
gctgggacgaggaagcgcatccgcagtgaccgcatcgatgactcgggtgaagaagaagaa
gaagaggcagcagggagcaggaagagacccaggcaacaagcaaccgccaagcccctggac
actggcctctctctggctgaggacgaagcactggtcctgcatctgctggggaaccagagc
tag
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