Salmo trutta (river trout): 115148707
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Entry
115148707 CDS
T08542
Symbol
tbpl1
Name
(RefSeq) TATA box-binding protein-like 1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115148707 (tbpl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115148707 (tbpl1)
03021 Transcription machinery [BR:
stru03021
]
115148707 (tbpl1)
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
115148707 (tbpl1)
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115148707 (tbpl1)
RNA polymerase III system
TFIIIB
115148707 (tbpl1)
RNA polymerase I system
SL1/TIF-1B
115148707 (tbpl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-GeneID:
115148707
NCBI-ProteinID:
XP_029546743
LinkDB
All DBs
Position
1:complement(2635723..2654510)
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AA seq
187 aa
AA seq
DB search
MEPSNDVALDIIITNVVAVFRTRCHLNLRTIALEGVNVIYKPEYGKVLMKLRKPRITASI
WSSGKIICTGATSEDEAKQGARRLARTLQKLGFKVRFSEFKVVNVLAVCSMPFAIRLIDF
TKNNRPIASYEPELHPAATYRIKTLKATVQVFSTGSLTITGPNVQAVATAVEHIYPMLLE
CQKPLRK
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggagcccagtaatgacgtggcgttggatatcattatcaccaatgtggtggccgtattc
aggacccgctgccacctcaacctgcgcaccatcgctctggagggggtcaacgtaatctat
aaacctgaatatgggaaagtcctgatgaaactccgcaaacccaggatcaccgcttccatc
tggtcttcagggaaaattatctgtactggtgctaccagtgaggatgaggctaagcaggga
gcccggagattagcccgcaccctacagaaactgggcttcaaggtgaggttctcagagttc
aaggtggtgaacgtcctggcagtgtgctccatgcccttcgccatcagactcatcgacttc
actaagaacaaccggcccatcgccagctatgaaccagagctccaccctgcagccacctac
aggatcaaaaccctcaaggccaccgtccaggtcttctctactggcagccttaccatcaca
ggaccaaatgtgcaggctgtagccacggctgtagagcacatctaccccatgctgttagag
tgtcagaaacccctccgcaaataa
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