KEGG   Salmo trutta (river trout): 115148707
Entry
115148707         CDS       T08542                                 
Symbol
tbpl1
Name
(RefSeq) TATA box-binding protein-like 1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
stru  Salmo trutta (river trout)
Pathway
stru03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    115148707 (tbpl1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:stru03000]
    115148707 (tbpl1)
   03021 Transcription machinery [BR:stru03021]
    115148707 (tbpl1)
Transcription factors [BR:stru03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    115148707 (tbpl1)
Transcription machinery [BR:stru03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     115148707 (tbpl1)
  RNA polymerase III system
    TFIIIB
     115148707 (tbpl1)
  RNA polymerase I system
    SL1/TIF-1B
     115148707 (tbpl1)
SSDB
Motif
Pfam: TBP DUF3378
Other DBs
NCBI-GeneID: 115148707
NCBI-ProteinID: XP_029546743
LinkDB
Position
1:complement(2635723..2654510)
AA seq 187 aa
MEPSNDVALDIIITNVVAVFRTRCHLNLRTIALEGVNVIYKPEYGKVLMKLRKPRITASI
WSSGKIICTGATSEDEAKQGARRLARTLQKLGFKVRFSEFKVVNVLAVCSMPFAIRLIDF
TKNNRPIASYEPELHPAATYRIKTLKATVQVFSTGSLTITGPNVQAVATAVEHIYPMLLE
CQKPLRK
NT seq 564 nt   +upstreamnt  +downstreamnt
atggagcccagtaatgacgtggcgttggatatcattatcaccaatgtggtggccgtattc
aggacccgctgccacctcaacctgcgcaccatcgctctggagggggtcaacgtaatctat
aaacctgaatatgggaaagtcctgatgaaactccgcaaacccaggatcaccgcttccatc
tggtcttcagggaaaattatctgtactggtgctaccagtgaggatgaggctaagcaggga
gcccggagattagcccgcaccctacagaaactgggcttcaaggtgaggttctcagagttc
aaggtggtgaacgtcctggcagtgtgctccatgcccttcgccatcagactcatcgacttc
actaagaacaaccggcccatcgccagctatgaaccagagctccaccctgcagccacctac
aggatcaaaaccctcaaggccaccgtccaggtcttctctactggcagccttaccatcaca
ggaccaaatgtgcaggctgtagccacggctgtagagcacatctaccccatgctgttagag
tgtcagaaacccctccgcaaataa

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