Salmo trutta (river trout): 115148794
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Entry
115148794 CDS
T08542
Name
(RefSeq) rab5 GDP/GTP exchange factor-like isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
stru
Salmo trutta (river trout)
Pathway
stru04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
115148794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115148794
Membrane trafficking [BR:
stru04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
115148794
Protein recycling
Other Rab GTPase associated proteins
115148794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
DUF2336
CID_GANP
Motif
Other DBs
NCBI-GeneID:
115148794
NCBI-ProteinID:
XP_029546883
Ensembl:
ENSSTUG00000005263
UniProt:
A0A673WGH0
LinkDB
All DBs
Position
15:complement(30592373..30630890)
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AA seq
509 aa
AA seq
DB search
MSQRKERRGIHVDQSELHCNKGCGYYGNAAWQGLCSKCWREEYQRARQKQIQEDWALAEK
LQREEEVAYASIQGAQSQPLSQPQAPPQASLAPFSKFEEKKTNEKTRKVTTVKKFFSPSS
RTAPKKENQEGKTPSPSISRQSSIETDRVSRDFVDFLKTLHKPGREVHKQSRAFIEIMAN
KKDLSADELSECVQDFYQNLSDRLMTHFKGSSERVERVMDEVEKYIMTRLYKSVFCPETT
DDEEKDLATQNRIRALHWVDIQMLCVPVDEEIPEVSDNVVKAITDVIEMDSKRVPRDKLA
CITRCSKHIFSAIKITKSEPASADDFLPTLIYIVLKANPPRLQSNIQYITRFCNPSRLMT
GEDGYYFTNLCCAVAFIEKLDAQSLNLDPEDFERYMSGQTSPRRPEADGGWPQVDPPTGS
AASSPALSQVYQNLDLLSGLGSRQDRVLEGVQSLQRDLITWQESVEREVQEILEKYPLEI
RLPAPSAIDSDNVENDRLPPPLTPQVFAG
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcggaaggagcgccgcgggatccacgtggaccagtcagagctgcactgcaac
aagggctgcggttactatggcaacgcagcctggcagggcctgtgctccaagtgctggcgg
gaggagtaccagcgggcccggcagaagcagatccaggaggactgggccctagctgagaag
ctgcagagggaggaggaggttgcctatgccagcatccagggggcccagtctcagcccctg
tctcagccccaggcgccaccccaggcctctctggcgcccttctccaagttcgaggagaag
aagaccaatgagaagacgcgcaaggtgaccactgtgaagaagttttttagtccctcgtca
cggacagcccccaagaaagagaaccaggagggcaagacccccagcccctccatcagccgc
cagtcaagcattgagacagaccgcgtctccagagactttgtggacttcctgaagaccctg
cataagcccggccgtgaggtccacaagcagagccgagccttcatcgagatcatggccaac
aaaaaggacttgagtgctgacgagctgtctgagtgtgtccaagacttctaccagaatttg
tccgaccgcctcatgactcattttaaaggctcttcagagcgtgtggagcgagtgatggat
gaggtggagaagtacattatgacacgcctgtataagagtgtcttctgccccgagaccaca
gatgatgaggagaaagacctggccactcagaaccggatacgggcgttacactgggtggac
attcagatgctttgtgtgccagtggatgaggagatcccagaggtttcagacaatgtggtc
aaagccataacagatgtcatcgagatggactccaagcgggtaccccgggacaagctagca
tgcatcacgcgctgcagcaagcacatcttcagcgccatcaagatcacaaagagcgagcca
gcctcggccgacgacttcctgcccaccctgatctacatcgtgctgaaggccaaccctcca
cgcctgcagtccaacatccagtacatcacccgcttctgcaaccccagcaggctcatgact
ggagaggacggatactacttcactaacctgtgctgtgcagttgccttcatcgagaaactg
gacgcccagtctctcaacttggaccccgaggactttgagcgctacatgtcgggccagacc
tctcctcgcaggcctgaggcagacggcggctggccccaggtggaccctcctactggttct
gccgcctccagtcccgccctgtcccaggtctaccagaacctggacctcctgtctggcctg
gggagccgacaagacagggttctggagggggtgcagagcctgcagagagacctgatcacc
tggcaggagagtgtggagcgagaggtgcaggagatactggagaagtacccgctggagatc
cgcctgcccgccccctccgccattgactcagacaacgtggaaaacgaccggctgccgcca
ccactgacgccccaggtgtttgctgggtaa
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