Salmo trutta (river trout): 115148848
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Entry
115148848 CDS
T08542
Symbol
ubc
Name
(RefSeq) polyubiquitin-C isoform X1
KO
K08770
ubiquitin C
Organism
stru
Salmo trutta (river trout)
Pathway
stru03320
PPAR signaling pathway
stru04120
Ubiquitin mediated proteolysis
stru04137
Mitophagy - animal
stru04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115148848 (ubc)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115148848 (ubc)
04137 Mitophagy - animal
115148848 (ubc)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
115148848 (ubc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115148848 (ubc)
Ubiquitin system [BR:
stru04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
115148848 (ubc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
115148848
NCBI-ProteinID:
XP_029546987
LinkDB
All DBs
Position
15:complement(33349021..33352582)
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AA seq
685 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGP
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagaccctgacaggcaagaccatcaccctcgaggttgagccaagc
gacaccattgagaatgtgaaggccaagatccaggacaaggagggcatccccccagaccag
cagaggctgatcttcgccggcaagcagctggaagatggccgcaccctctcagattacaac
atccagaaagaatccaccctccatcttgtgctgcgtctcaggggaggtatgcagatcttc
gtgaagaccctgacaggcaagaccatcaccctcgaggttgagccaagcgacaccattgag
aatgtgaaggccaagatccaggacaaggagggcatccccccagaccagcagaggctgatc
ttcgccggcaagcagctggaagatggccgcaccctctcagattacaacatccagaaagaa
tccaccctccatcttgtgctgcgtctcaggggaggtatgcagatcttcgtcaagaccctg
acaggcaagaccatcaccctcgaggttgagccaagcgacaccattgagaatgtgaaggcc
aagatccaggacaaggagggcatccccccagaccagcagaggctgatcttcgccggcaag
cagctggaagatggccgcaccctctcagattacaacatccagaaagaatccaccctccat
cttgtgctgcgtctcaggggaggtatgcagatcttcgtcaagaccctgacaggcaagacc
atcaccctcgaggttgagccaagcgacaccattgagaatgtgaaggccaagatccaggac
aaggagggcatccccccagaccagcagaggctgatcttcgccggcaagcagctggaagat
ggccgcaccctctcagattacaacatccagaaagaatccaccctccatcttgtgctgcgt
ctcaggggaggtatgcagatcttcgtcaagaccctgacaggcaagaccatcaccctcgag
gttgagccaagcgacaccattgagaatgtgaaggccaagatccaggacaaggagggcatc
cccccagaccagcagaggctgatcttcgccggcaagcagctggaagatggccgcaccctc
tcagattacaacatccagaaagaatccaccctccatcttgtgctgcgtctcaggggaggt
atgcagatcttcgtcaagaccctgacaggcaagaccatcaccctcgaggttgagccaagc
gacaccattgagaatgtgaaggccaagatccaggacaaggagggcatccccccagaccag
cagaggctgatcttcgccggcaagcagctggaagatggccgcaccctctcagattacaac
atccagaaagaatccaccctccatcttgtgctgcgtctcaggggaggtatgcagatcttc
gtcaagaccctgacaggcaagaccatcaccctcgaggttgagccaagcgacaccattgag
aatgtgaaggccaagatccaggacaaggagggcatccccccagaccagcagaggctgatc
ttcgccggcaagcagctggaagatggccgcaccctctcagattacaacatccagaaagaa
tccaccctccatcttgtgctgcgtctcaggggaggtatgcagatcttcgtcaagaccctg
acaggcaagaccatcaccctcgaggttgagccaagcgacaccattgagaatgtgaaggcc
aagatccaggacaaggagggcatccccccagaccagcagaggctgatcttcgccggcaag
cagctggaagatggccgcaccctctcagattacaacatccagaaagaatccaccctccat
cttgtgctgcgtctcaggggaggtatgcagatcttcgtcaagaccctgacaggcaagacc
atcaccctcgaggttgagccaagcgacaccattgagaatgtgaaggccaagatccaggac
aaggagggcatccccccagaccagcagaggctgatcttcgccggcaagcagctggaagat
ggccgcaccctctcagattacaacatccaaaaagaatccaccctccatcttgtgctgcgt
ctcaggggaggaccttaa
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