KEGG   Salmo trutta (river trout): 115148848
Entry
115148848         CDS       T08542                                 
Symbol
ubc
Name
(RefSeq) polyubiquitin-C isoform X1
  KO
K08770  ubiquitin C
Organism
stru  Salmo trutta (river trout)
Pathway
stru03320  PPAR signaling pathway
stru04120  Ubiquitin mediated proteolysis
stru04137  Mitophagy - animal
stru04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    115148848 (ubc)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    115148848 (ubc)
   04137 Mitophagy - animal
    115148848 (ubc)
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    115148848 (ubc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:stru04121]
    115148848 (ubc)
Ubiquitin system [BR:stru04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   115148848 (ubc)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5
Other DBs
NCBI-GeneID: 115148848
NCBI-ProteinID: XP_029546987
LinkDB
Position
15:complement(33349021..33352582)
AA seq 685 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGP
NT seq 2058 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccctgacaggcaagaccatcaccctcgaggttgagccaagc
gacaccattgagaatgtgaaggccaagatccaggacaaggagggcatccccccagaccag
cagaggctgatcttcgccggcaagcagctggaagatggccgcaccctctcagattacaac
atccagaaagaatccaccctccatcttgtgctgcgtctcaggggaggtatgcagatcttc
gtgaagaccctgacaggcaagaccatcaccctcgaggttgagccaagcgacaccattgag
aatgtgaaggccaagatccaggacaaggagggcatccccccagaccagcagaggctgatc
ttcgccggcaagcagctggaagatggccgcaccctctcagattacaacatccagaaagaa
tccaccctccatcttgtgctgcgtctcaggggaggtatgcagatcttcgtcaagaccctg
acaggcaagaccatcaccctcgaggttgagccaagcgacaccattgagaatgtgaaggcc
aagatccaggacaaggagggcatccccccagaccagcagaggctgatcttcgccggcaag
cagctggaagatggccgcaccctctcagattacaacatccagaaagaatccaccctccat
cttgtgctgcgtctcaggggaggtatgcagatcttcgtcaagaccctgacaggcaagacc
atcaccctcgaggttgagccaagcgacaccattgagaatgtgaaggccaagatccaggac
aaggagggcatccccccagaccagcagaggctgatcttcgccggcaagcagctggaagat
ggccgcaccctctcagattacaacatccagaaagaatccaccctccatcttgtgctgcgt
ctcaggggaggtatgcagatcttcgtcaagaccctgacaggcaagaccatcaccctcgag
gttgagccaagcgacaccattgagaatgtgaaggccaagatccaggacaaggagggcatc
cccccagaccagcagaggctgatcttcgccggcaagcagctggaagatggccgcaccctc
tcagattacaacatccagaaagaatccaccctccatcttgtgctgcgtctcaggggaggt
atgcagatcttcgtcaagaccctgacaggcaagaccatcaccctcgaggttgagccaagc
gacaccattgagaatgtgaaggccaagatccaggacaaggagggcatccccccagaccag
cagaggctgatcttcgccggcaagcagctggaagatggccgcaccctctcagattacaac
atccagaaagaatccaccctccatcttgtgctgcgtctcaggggaggtatgcagatcttc
gtcaagaccctgacaggcaagaccatcaccctcgaggttgagccaagcgacaccattgag
aatgtgaaggccaagatccaggacaaggagggcatccccccagaccagcagaggctgatc
ttcgccggcaagcagctggaagatggccgcaccctctcagattacaacatccagaaagaa
tccaccctccatcttgtgctgcgtctcaggggaggtatgcagatcttcgtcaagaccctg
acaggcaagaccatcaccctcgaggttgagccaagcgacaccattgagaatgtgaaggcc
aagatccaggacaaggagggcatccccccagaccagcagaggctgatcttcgccggcaag
cagctggaagatggccgcaccctctcagattacaacatccagaaagaatccaccctccat
cttgtgctgcgtctcaggggaggtatgcagatcttcgtcaagaccctgacaggcaagacc
atcaccctcgaggttgagccaagcgacaccattgagaatgtgaaggccaagatccaggac
aaggagggcatccccccagaccagcagaggctgatcttcgccggcaagcagctggaagat
ggccgcaccctctcagattacaacatccaaaaagaatccaccctccatcttgtgctgcgt
ctcaggggaggaccttaa

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