Salmo trutta (river trout): 115148853
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Entry
115148853 CDS
T08542
Name
(RefSeq) nuclear receptor corepressor 1-like
KO
K04650
nuclear receptor co-repressor 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115148853
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
stru01009
]
115148853
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115148853
Protein phosphatases and associated proteins [BR:
stru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115148853
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
115148853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
LOB
Motif
Other DBs
NCBI-GeneID:
115148853
NCBI-ProteinID:
XP_029546996
Ensembl:
ENSSTUG00000013753
LinkDB
All DBs
Position
15:33389866..33507509
Genome browser
AA seq
2500 aa
AA seq
DB search
MSSSSGYPPTQGSFSSEQSRYPPHSVQYTFSTTRHQQEFTVPDYRGHLQDQQGRRRPSLL
SEFHPGTERPPERRHGYEQQFHSVTSQQQTDGHEALEAKRPRMETVSEAHFSHNALSGGI
VLPLQSHQVQDSLRASGGEVKKETQFSGMKAESQSPGGLHRVGEEQDGSPSKLSKEELIQ
SMDRVDREIAKVEQQIFKLKKKQQQLEEEAAKPVEPEKPVTPPPIPQEHNKHRSIVQIIY
DENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKRLILFFKRRNHAR
KQREQNICQRYDQLMEAWEKKVERMENNPRRKAKDGRTREYYERQFPEIRKQREQQERFQ
RVGQRGTGMSATIARSEHEISEIIDGLSEQENNEKQMRQMSVIPPMMYDTEQRRVRFINM
NGLMDDPMKVYKARQFMNVWTEHEKEIFKEKFVQHPKNFGLIASYLERKCVSDCVLYYYL
TKKNQNYKTLVRRNYGRRRGRNQQITRPSQEDKSDDKIEEEKSEKSEKKEDEQNKEEEEK
DEKEDSRDIGKDKDKCDGGEDEDGKEQSTPRGRKTANSQGLRKGRITTRSMANEAASVAT
EEPLPPASAPEPALPAESPQPPKAEPTTQKAIREPTKTAPGGAPMDPNRGALGTAAAANI
ETGETSRWTEEEMEVAKKGLVEHGRNWPAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQ
QHKQDTRRARGDRDPSQSESMASADDDENPEDSDGGENSSDTESAPSPSQADPSKAGGES
QRGDIAGGSESQRSDQDQASDRKGQDPSYGELRVKLEKSPDGESRDPDSQEDQDRERARA
AYEGQVHPKCEPQEVDMKPGGTEVQVKVEPDSAKEKGDNGEREEQREGHHSDNDSSATCS
ADEDVDAEPERQRIFSSMDKPSLLSPPGSVLMSTAKQAHLNMQQLQQRTAAIPPMVGPFS
TGGMPMGAPLSGFAMFQHQIKAVHESAHAEDKQRQDQADPEHSRQPPNCPRFTTHSPTVL
DREGKPFPYMPYDMKMALEQEAQSGRPGSPYRLSPRDMSKASPQPNDPNASRYSVPPVLQ
PAPNQVVQSLPDGVRVTFSRHSRPANIPSPPPLIPTSKPTDKPSFIQGGSISQGTPGTYL
SSHSVYGGPEVAKSSVGSISLGLPRQQDPTKPVSYIKQEECSPRGQSEGLLSQMQYEGVV
RGGPMDGGISRGNPARGSITQGTPALSGSSIAADLLKGTITKLTTEDLNSPEKAREQLTK
GHVIYEGKSGHILSYDAIKNPREATCSPRSGHELKRSHDMMEAARGHPGREGAPFEGLII
RALPRESPHGESKERPMITGSIMQGTPRTSAEAYEESMKYGKQIKRESPPIRSFEGGIGK
GKPYEGVNTIKEMGRSIHEIPRQEQPGQDPRKTPDMAANSRAAMEGSISQGHPLSQSAIK
HNVKSLITSPSRLPHGPTMPQLEAMERAKYEESKVAAEQQQRARHTSVVNSATSVLRSTH
QEQGKSQLSPGMYQDADARRTPVNYSTSSMSRGSPMLGRGQEGSGKPTSHDRKSAMTPNQ
RESVPAKSPVSGGDPNHPMASHSPFDPHHRPMAPGEPRFHLPPHLDPTLFHRAVLDPAAY
MFPRQPSPTGYHNTYQLYTMENTRQTILNDYITSQQMQVIPRPDVARVLSPREQQQIAIS
YPPGARGIIDLAQMPPTILLPHPGGTGTPTMDRITYIPGAQPPFPPRPFNPASISPGHQA
HLAATAAACQERERERERERERERDREHREKEREKERERENREREREEYRQRERERVVAA
AVANDYMRGGPGQPDRPGSRGYLRSPSPSMRSQEAQQQRPSIFQGTNSKGVITPLMPSAA
AAQAGARYSTAADALAALVDAAASAPQMDVNKGKDSSKHDRDDDMSSSSSSAARRQHEQQ
QQEADRRSMQSPYMSLPGGKPHPGYAEGSGGPQGGKDKGPPTKSRIEEELRTRGKTTITA
ANFIDVIIKRQIASDKDSRERGSQSSDSSSSLTSSRYEVPSGGAIEVISPANSPAQAQQE
KQQQDDRERADRDRAAQAATQAAGMRSFDMIRYRQSAESQQPPSSQADGGYSQSQQVPKT
HRVMTLADHISHIITQDFARNQDPPQSSTTISSSATTTFQSAQLPVSSSGPGGRAKGHSR
YSPENQTQAPSHHQRPTPSRVSPENAPDKPRARPGKSPDRGGRGAVETYEPISPPQSYQD
KQQEAREQQQQQQPQRREADQPEMRGDSRSPGSVSYLPSFFTKLENTSPMVKSKKQEIFR
KLNSSGVGDSDVGNAQPGTEIFNLPAVTSSSSVNPRNHSFSDPASNLGLEDIIRKALMGN
LEERPEEHQGGPQPSCNTPSNEARQEANPSPSMGKQKLQSKANSRKSKSPNPGQAYAAAQ
AAGGERPSSVSSVHSEGDYHQQAPGWAWEDRPSSTGSMQFPYNPLTMRMLSSTPPTSMAS
PSMQAQQPPPGGPLGSQQQRVWEREPLLSEQYETLSDSDD
NT seq
7503 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtagctcgggctacccccctacccaggggagcttcagcagcgagcagagccgc
tacccaccacactctgtccagtacaccttcagcaccacacgtcaccaacaggagttcacc
gtcccggactaccgaggtcacctgcaggaccagcagggtcggcgaaggccttccttgctt
tctgaattccaccctggaactgagaggcctccagagagacgtcatggctatgagcaacag
ttccacagtgtcacctcccagcagcagaccgatggacacgaggccctggaagccaagcgg
cctcgcatggagaccgtctctgaggcccacttttcccataatgccctgtccggaggcatc
gttctgcccctgcagtcccaccaggtccaggacagcctcagagcctctggaggggaggtc
aagaaggagacccagttcagtggcatgaaagccgagtcccagtccccaggagggctgcac
cgtgtgggggaggagcaggacggctcgccctccaaactgtccaaggaggaactgatccag
agcatggaccgtgtggacagagaaatcgctaaagtggagcagcagatcttcaagctgaag
aagaagcagcaacaactggaggaggaagcggcgaagccagtggagccagaaaagccggtg
acccctccccccataccacaggaacacaacaaacaccgcagcatcgtccagatcatatat
gacgagaacaggaaaaaagctgaagaggcccataagatatttgaaggtcttggtcccaag
gttgaactgcccctttataaccagccgtctgatactaaagtataccatgacaacataaag
actaatcaagtgatgaggaagaggctgattctgtttttcaagagaaggaaccatgctcgt
aaacaaagggaacagaacatctgccagcgctacgaccagctgatggaggcgtgggagaag
aaggtggagcggatggagaacaacccgcgtcgcaaggccaaggatggccgcaccagggag
tactacgagagacagttccccgaaatacgcaagcagagagagcagcaggagcgcttccag
agggttggtcagagaggaactggaatgtctgcgaccatcgccagaagcgagcatgagatt
tctgaaatcatcgacggcctttctgaacaggagaacaacgagaagcagatgagacagatg
tccgtcatcccgcccatgatgtacgacacagagcagaggcgagtcaggttcatcaacatg
aacggcctgatggacgacccaatgaaggtgtacaaggctcggcagttcatgaatgtgtgg
accgaacacgagaaggagattttcaaggaaaagtttgttcagcacccaaagaattttggc
ctcattgcttcctatctagagagaaagtgtgtctccgattgtgtcctgtactactacttg
accaagaagaaccagaactacaagacgctggtgagacgcaactatggaagacggcgaggg
agaaaccagcaaataacacgaccctcacaagaagacaagtctgacgacaaaatcgaagag
gagaaatcggagaagtcagagaaaaaagaggacgagcagaataaggaagaggaagagaaa
gatgaaaaggaggactccagggacatcggcaaagacaaagacaagtgtgacggtggggaa
gacgaggacggaaaggagcagagcacgccgcgcggcagaaagaccgccaacagccagggc
ctgcgcaagggaaggatcaccacgcgctccatggccaatgaggctgcctccgtggcgacc
gaggagccactaccgccggcctccgcccctgagcctgccctgcctgcagagtctcctcag
ccccccaaagctgagcctactacacagaaggccattagagagcccaccaaaactgcacca
ggtggagctcccatggaccctaacagaggagcactaggaactgctgccgccgcgaacatt
gaaaccggtgagacttctcgctggaccgaggaggagatggaggttgccaaaaaaggcctt
gtggagcatgggcgtaactggccagccattgccaagatggtgggcaccaagagcgaggct
cagtgcaagaacttctacttcaactacaagagacggcacaacctggacaacctgctccag
caacacaagcaggacacccggcgggcacggggtgatcgggacccgtctcagagcgagagc
atggcctcagctgacgatgatgaaaacccagaggatagtgacggtggagagaacagctca
gacacagaaagcgccccgtccccgtcccaggcggacccctccaaggccggaggagagtcc
cagaggggagacattgctggagggtcagagagccagcggtctgatcaggaccaggccagc
gatagaaagggccaggatccgtcctacggggagctgagggtcaagctggagaagagcccg
gacggagagtccagagaccctgactctcaggaggatcaggacagggagagggcccgggcg
gcctacgagggccaggtgcaccccaagtgcgagccccaggaggtggacatgaagcccggg
ggtactgaggtacaggtgaaggtggagcctgactcggctaaggagaagggggacaatggg
gagagagaggagcagagagaggggcaccactcagacaatgactccagcgccacctgcagt
gcagatgaggatgtggacgctgagcccgagagacagaggattttctctagtatggacaag
ccttcgctgctcagccctcccggctcagtgctgatgtccacggccaagcaggcccacctc
aacatgcagcagctccagcagcgcaccgctgccatcccgcccatggtgggtcctttcagc
actggcgggatgcccatgggagctcccctcagtggctttgccatgttccagcaccagatc
aaggcggtgcacgagtcggcccacgcggaggataagcagagacaggaccaggccgacccc
gagcacagcagacaacctcccaactgcccgcgcttcactacccacagccccactgttctg
gacagggagggtaagcccttcccctacatgccttatgatatgaagatggctctggagcag
gaggcccagtctggtcggccaggctctccctacaggctctctcccagggacatgagcaag
gcctctcctcagcccaacgaccccaacgcctcccgctacagcgtgcctccagtgctccag
ccagctcccaaccaggtggtccagagcctgcctgatggagtccgcgtgactttctccaga
cacagccgacctgccaacattccatctcctcctccactcattccaacctccaaacccaca
gacaagccttcctttatccagggcggctccatctcccagggaactcctggtacgtacctg
tcatcccattctgtctacggtggcccagaggttgcaaagagctcagtgggctccatatcc
ctgggcctgcccaggcagcaggaccccaccaaacctgtgtcctacattaagcaggaggag
tgttctccgcgtggccagtcggagggcctcctctcccagatgcagtatgagggggtagta
agaggaggcccaatggatgggggtatcagcagaggcaacccagccagaggatcaatcaca
cagggcacgccagccctgtctgggtccagcattgcggctgacctgctgaagggcaccatc
accaagctgaccacggaggacctgaacagcccagagaaggcccgggaacagctgaccaag
ggacacgtcatctatgagggcaagagtggacacatcctatcctacgacgccattaagaac
ccaagagaggccacgtgtagccccaggtcaggccatgagctcaaacgctcccacgatatg
atggaggccgccagaggccaccccgggagagaaggagcccccttcgaggggttgataatc
cgagccctgcccagagaaagtccccatggggagtctaaggagaggcccatgatcactgga
tccatcatgcaaggtacacccagaacctctgcagaggcctatgaggagagcatgaagtac
ggcaagcagataaagagggagagcccacccatccgctcatttgagggggggataggtaag
ggtaaaccctacgagggggtgaacaccattaaggagatgggtcgctccatccatgagatt
ccccgtcaagagcaacctggacaggacccccgcaagacccccgacatggctgccaacagc
cgagccgccatggagggctccatatcccagggccatcctctgagccagtcggccatcaag
cacaacgtcaagtccctgatcaccagtcccagtaggctgccccacggccccaccatgccc
cagctggaggccatggagcgggccaagtacgaggagagcaaggtggcggcggagcagcag
cagcgggcgcgccacacctctgtggtcaactcggccacctccgtgctgcgctccacccac
caggagcaaggaaagtcccagctcagcccgggcatgtaccaagacgcagatgcccgcagg
accccggtcaactacagcaccagctccatgtccagaggctcgcccatgctgggccgagga
caggagggctctgggaagcctacgtcccacgataggaagagtgccatgacccccaatcag
agagagagtgttccagccaagtcccctgtgtcagggggtgaccccaaccaccctatggcc
tcccacagcccctttgacccccaccaccgccccatggcccctggagagcctcgcttccac
ctgcctccacacctagaccctaccctcttccaccgggccgtcctggaccctgctgcatac
atgttcccgaggcagccgtccccgacgggctaccacaacacctaccagctgtacaccatg
gagaacacaaggcagaccatcctcaatgattatatcacctcacagcagatgcaggttata
ccacggcccgatgttgccagggtcctgtcgccacgggaacagcaacagattgccatctct
tatcctcccggagcgcgagggattattgatctagcccagatgcctccaactatcctgttg
cctcaccctgggggaacaggtactcccactatggaccgcatcacctacatccccggagct
caaccccctttccctcctaggcctttcaacccagcctccatatctccaggccaccaagcc
cacctcgcagctacagcagcggcctgtcaggagcgagaacgagagagggagcgcgaaaga
gaaagggagcgcgatcgggagcatcgagagaaagagagggaaaaggaacgagaaagggag
aacagggagagggaaagagaggagtacagacaacgagagcgtgagcgagtggtggctgca
gcggttgccaatgactacatgcgtggaggtccagggcagccagatagaccaggaagccgt
ggttacctgcgtagcccctccccatctatgaggtcacaggaagcccagcagcagcgaccc
agcatcttccaaggaaccaacagcaagggcgtcatcacccctctcatgccgtcagcagca
gcagcccaggcaggagcccgttacagcactgcagccgacgccctggctgccctggtggac
gctgccgcctccgcccctcagatggacgtcaacaagggcaaggactcctccaagcacgat
cgagacgacgacatgtcttcatcatcatcctctgcggccaggcggcagcacgagcagcag
cagcaggaggcagacaggcgctccatgcagtctccctacatgtctctgccaggggggaaa
ccccacccaggatacgctgaggggtctggtggtccccaggggggcaaggacaagggtccc
cccaccaagtcacgcatcgaggaggagctgaggaccagaggaaagaccaccatcacggcc
gccaacttcatcgacgtcatcatcaagcgtcagatcgcctcggacaaggactcacgggag
agaggctcccagagctccgattcctccagcagcttgacatccagtcggtatgaggtcccc
agtggaggagccatcgaggtgatcagcccagccaactctccagcccaggcccagcaggag
aaacagcagcaggatgacagggagagggctgacagggacagggccgcacaggcagcaaca
caagcagctggcatgcgttcctttgacatgatccgctaccgccagtcagcggagtcccag
cagcccccctcctcccaggctgacggagggtactcccagtcccagcaggtccccaagacc
caccgggtcatgaccctggctgaccacatctcgcatattatcacccaggactttgccagg
aaccaggatcctcctcagtcctccaccaccatctcctcctctgccaccaccacattccag
agcgcccagctgccagtatctagctcgggccccgggggccgtgccaagggccacagccgc
tacagcccagagaaccagacccaggccccatcacaccaccagagacccacgcccagcaga
gtgtctcctgagaacgcccctgacaagcccagagccagacctggtaaatcccctgatcgg
ggtggcaggggggccgtggagacttatgagcccatctcccctccccagagctaccaggat
aaacaacaggaggccagagagcagcagcagcagcaacaaccccagagacgagaggctgac
cagcctgagatgaggggcgactctcgctcccctggcagtgtcagctacctgccctccttc
ttcaccaagctggagaacacctcccctatggtgaaatccaagaagcaggagatatttcgt
aagttaaactcctctggtgtcggggattctgatgtaggaaatgcacaaccaggcacagag
atcttcaacttgcccgctgtgaccagctcaagcagcgtgaaccccaggaaccactccttc
agcgatccggccagtaaccttggcctggaggacatcatccggaaggccctgatgggcaac
ctggaagaaaggccagaggagcaccagggagggcctcagcccagctgtaacacccccagc
aacgaggcccgccaggaggccaacccctcaccgagcatgggcaagcagaaactgcagagc
aaagccaacagccggaagtccaagtcgcccaacccaggtcaggcatacgcagcagcccag
gcagcaggaggggagcggccctcatcagtctcctccgtccactcagagggagactaccac
cagcaggccccgggctgggcctgggaggaccggccctcgtccacaggctctatgcagttc
ccctataaccccctgaccatgcgcatgctgagcagcacgccccccacctccatggcctcc
ccctccatgcaggcccagcagcccccaccaggaggccctctggggtcccagcagcagcgt
gtgtgggagcgggagcccctactgtcggagcagtatgagaccttgtcagacagtgatgac
tga
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integrated database retrieval system
