Salmo trutta (river trout): 115148914
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Entry
115148914 CDS
T08542
Name
(RefSeq) tsukushin-like
KO
K08130
tsukushi
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
stru00535
]
115148914
Proteoglycans [BR:
stru00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
115148914
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_NXF1-5
LRR_EndoS
LRR_14
LRR_LRWD1
LRRNT
Motif
Other DBs
NCBI-GeneID:
115148914
NCBI-ProteinID:
XP_029547084
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Position
15:36887087..36893263
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AA seq
355 aa
AA seq
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MSSFLGVSVWFLLVLHYVAAVMDCHPGCRCEVESFGLFDSFSLTRVDCSGVGRGHGLVVP
ISIPLDTSSLDLSSSAIHTIADSMLSGPGYTTLASLDLSNNLLSRLNSSIFSRLRYLETL
DLSHNTLEELAPGCFSGLPLAEVDLSGNRLQEVSLEVFSNKGHGAGPLNVDLSNNLLNTV
TTRDPQVLSPPNIQSLSLAGNRLRAVPKLQGLPLRSLSLDGNPILRIERHSFTGLRDLAY
LSLSGLSELTSIQLQSFSELSSLQVLDLSHNSRLRPLNPEVFSGLAALQELNLSNSGVVS
LPSNILHLLPSIKSIVVREKVNCWKTHRQVQFHRQIGGQSTRGEELTCDVIGIVL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtttcttgggtgtgagtgtttggttcttgctcgtccttcactatgtggctgca
gtgatggactgccacccaggttgtcgctgtgaagtcgagagcttcggcctgttcgacagc
ttcagcctgaccagggtcgactgtagtggggtgggccgtggtcatggcctggtggtcccc
atctccatccccctggacacctcctccctggacctgtcctccagcgccatccacaccatc
gctgactccatgctctctgggccgggctacaccacgctggccagcctggacctcagcaac
aacctcctctccaggcttaacagcagcatcttctccaggttgcgctacctggagaccttg
gacctgagccacaacaccctggaggagctggcccccggctgcttctctggcttgcccctg
gccgaggtggacctgagcggcaacaggctccaggaggtcagcctggaggtcttttccaac
aagggccatggtgcaggacctctcaatgtggacctgtctaacaacctgctgaacacggtc
acgactagggatccacaggtgctaagccctcctaacattcagagcctcagtctggcaggg
aatcgtctgagggctgtgcccaagctgcagggcctcccactgaggtctctgagcctggac
ggaaaccccatcctcaggatcgaaaggcacagcttcacagggctaagggatctggcttac
ctgtctctcagtgggctgtctgagctcacctccatccagctccaaagtttcagtgagctg
agcagcctgcaggttctggacctgtcccacaacagcaggctgagaccacttaaccctgag
gtgtttagcggactggctgccttacaggagctcaacctgtccaactcaggggtggtgtct
ctgcccagcaacattctccacctcctgcccagcatcaaaagcatcgttgtcagggagaag
gtaaactgttggaagacccatagacaggtgcagttccacagacagataggaggacagtca
acaaggggggaggaattgacctgtgatgtcataggaattgttttatga
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