Salmo trutta (river trout): 115149001
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Entry
115149001 CDS
T08542
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115149001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115149001
Membrane trafficking [BR:
stru04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
115149001
Endosome - Golgi transport
Arf GTPase associated proteins
115149001
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
115149001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
RhoGAP
ArfGap
PH_11
PH_6
RA
PH_3
SOS1_NGEF_PH
Ras_bdg_2
GAP1-M
Motif
Other DBs
NCBI-GeneID:
115149001
NCBI-ProteinID:
XP_029547282
Ensembl:
ENSSTUG00000014507
LinkDB
All DBs
Position
15:39561450..39579357
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AA seq
1139 aa
AA seq
DB search
MNQLFVSDVMADQEDSLRAMQNCFRSQFSVEEVECEDIEASRRTSSVDEDSIDLACTLSR
SYDLGDSDLHHTPVIKMGWLDKTPPQGSLIFQKRWVMLDAQYLRYFQNEKEVYSKRIIDI
LSVTEVLNVGEQKFEVVTRNRTFLFRAENNTVREEWVSVLKETIQQRRSSMEMSLMNFSF
TSGQHDSGVSLISKQGYLEMNGLRSKVYVVICADRVFLYGNAEEHSQGVGITYIEMNVGT
VKSTDKRSFNLTTFYRTFSFLAESAQQRDQWVEALQDCVSRSLSSDVVAQKIWAVEANQR
CADCGAPHPDWASVNLCVVLCKCCAGVHRGLGQSVSKVRSLRMDEKVWTDNLIQVFLLGN
NMVNLFWAANMPPSEALHPSSDSEKRQRFVSAKYCQGKYRRYHALFGQQEALNKALCSTV
QTDDVLETLSLVFCGADVNCYTGDPELPSPVSMAQHYGQILQVEFLTHNHNTELPGSRAG
DRTLLEAALPVSHTGYLFKTASSIRPVTEGKAKGDFSRRWCSLNQGNFSYYESEKSSSQS
GGMKMSDVLCLLVNPPGKHGYAHSFELYHDSGRVYLFGEDSSDKVKGWIKAIAKALVPSA
AEDLVCWPFERVGRFRYTEGQSHHSPLLGWFSLGGSRLLLLLHGADRVENIDLRKIKELS
MEQEAGAVVLVDGGRSLRVEGDRRPDFQGWLSGLQQGSGRGDGPLDKQQLTDTDVPVIVD
RCMSFITQHGLKSEGIYRRCGVNSKITALLFFLRHDPRKVRLSEGERQVDDVANVLKRFL
REVGEGVFNGHQASLPWLHTTTISEMSERVSQYQALLHSLPRVNRATLGAVINHLYCVQC
FADENQMNMHNLAIVFGPTLFQMDGTDNSAGQVVEDLIQNYQDIFNVDAEQFQRQLDMIS
HVIKAQKEHTEEGSPSPLTICGVYLERKEEGSELLVQISQEVSAEELVCKVLRRRNIPPQ
QGDYWSCFLVDNNQEIERPLHYQEQVLTIYFSLGKDCHLVVKKNCYMEAILTNIAGRVDV
SRNGLIKFCEEKGQRGKGTFSRRLCVLSGLSLRLYKEVKSSQPERECSVHALKVYCGIKR
KLQPPSCWGMTVVCEKAVRDIQQWYLCCESKNELIEWLATFMSLQHDGDLWPAASRLDS
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagttattcgtctcagatgtcatggcagaccaggaggactcattgcgagccatg
cagaactgcttccgcagtcagtttagtgtggaggaggttgagtgtgaggacattgaagca
agcaggagaacatcatcggttgatgaagacagtatcgatcttgcctgcacactgtcacga
tcatacgaccttggagactctgatcttcaccacactcctgttatcaagatgggctggctg
gacaagaccccacctcaggggagccttattttccagaagcgttgggtgatgttggatgca
cagtacctgcgatactttcaaaatgagaaggaggtctactcaaagcggatcatagacata
ctgtctgtcactgaagtgcttaacgttggagagcagaagtttgaggtggtgacaaggaac
aggactttcttgttccgtgctgaaaacaacactgtcagggaggaatgggtgtcagtactg
aaagaaactattcagcagcgtcgtagcagcatggagatgtcccttatgaacttcagtttt
actagtggtcagcatgatagtggagtctctctcattagtaaacaaggatacctggagatg
aatggactgcgctccaaggtctatgtagtcatctgtgcagacagggtcttcctctacggg
aacgctgaggagcacagccagggtgttggcatcacctacattgagatgaatgtgggtact
gtgaagagcacagacaaacggtccttcaacctcaccaccttctacagaacattcagtttt
ctggccgagtcggcgcagcagagggatcagtgggtggaggccctgcaggactgtgtcagt
cgctctctgtccagcgatgtggtggcccagaagatctgggctgtggaggccaaccagcgc
tgtgcagactgtggcgccccccatccagactgggcctctgtcaacctctgtgtggtcctt
tgcaagtgctgtgcaggcgtgcacaggggtctgggccagagtgtgtccaaagttcgcagt
ctgagaatggatgaaaaggtgtggactgataaccttattcaggtgttcctgttaggtaac
aacatggtaaacctattttgggcagctaacatgccaccaagcgaggcactccacccatca
agtgatagtgagaagcgccagcgctttgtctctgctaagtactgtcaggggaaataccgc
cgctaccatgctctgtttggccaacaggaggccctcaacaaagctctgtgcagtactgtt
cagacggatgatgtattggagactctgtctctggtgttctgtggagcagatgtgaactgt
tatacaggtgatccagagctgcccagccctgtgtccatggcccaacactatggacagata
ctacaggtggagttcttaactcacaaccacaacacagagctgccagggtctagggctgga
gatcgcacactcctagaggctgctctccccgtctcacacactggttatctcttcaagacc
gcttcctcaatacggccagtaacagagggcaaagcaaaaggagattttagtcgtcgatgg
tgctctctgaaccaaggtaacttcagctactatgagagtgagaagagctccagtcagagc
ggcggaatgaagatgagtgatgtcctgtgtctgttggtcaatcccccagggaaacatggt
tatgcccattcctttgagctgtaccatgactctgggagagtctatctatttggagaagac
tcctctgacaaagtgaaagggtggatcaaggccatcgccaaggcgctggtcccctctgca
gcagaggacctggtgtgctggccctttgagagggtgggccggtttcgctacactgagggc
cagagccaccatagccccctcctgggctggttctccctggggggctccagactgctccta
ctcctccacggagcagatcgagtggagaacatcgacctgcgcaaaataaaggagctctcc
atggagcaggaggctggtgctgtggtgctggtggatggaggcaggagcctgcgtgtggag
ggggacaggaggcctgacttccagggctggctgagtgggctccaacagggctcagggaga
ggagacggccccctggacaagcagcagctcactgacacagacgtccctgtcatcgtggac
cgctgcatgagcttcatcacacagcatggtttgaagtcagagggcatctatcggaggtgt
ggtgtgaactccaagatcaccgccctgctgttctttctccgccatgacccccggaaggtc
cgtctgagtgaaggggagcgccaggtggatgatgttgcaaatgttctgaagaggttcctc
agggaagtgggagagggggttttcaatggccatcaggcctctctgccatggctccacacc
actactatcagtgagatgagtgagagagtgtcccagtaccaggccctcctccacagcctc
ccccgagtcaacagagccactctgggggctgtcatcaaccacctctactgcgtccagtgc
tttgcagatgagaatcagatgaacatgcacaacctggccattgtgtttggtcccacgctc
ttccagatggacggcactgataacagcgcaggacaggtggtagaggatctcatccagaac
taccaggacatcttcaatgtggatgcagagcagtttcagaggcagctagacatgatatcg
catgtcatcaaagcacagaaggaacacaccgaggagggaagcccctcacctctcaccatc
tgtggggtttacctggagaggaaggaggagggctctgagctgctggttcagatctcccag
gaagtgagtgctgaggagctggtatgtaaggtcctgagacgcaggaacatccctccacag
cagggggactactggagttgcttcctggtcgacaacaaccaggagatagagcgtccactg
cactatcaggagcaagtgctgactatctatttctctctgggtaaagactgtcatctggtg
gtcaagaagaactgctacatggaggccattcttaccaacatagcaggcagggtagatgtg
tcccgaaacggcctgatcaagttctgtgaagagaaaggtcaaaggggtaagggaaccttc
agcagacgcctctgtgtgctcagtggcttgtctctaaggctgtacaaagaagtgaagagt
tctcagcctgagagggagtgttcagtccatgctctgaaggtctactgtggtatcaagagg
aagttacagccaccgtcatgctgggggatgactgtggtgtgtgagaaggcagtacgagac
atacagcaatggtacctgtgctgtgaatcaaagaacgagctgatcgagtggctggccact
tttatgagcctccagcatgatggtgatctgtggccagcagcttccaggctagattcctga
DBGET
integrated database retrieval system
