Salmo trutta (river trout): 115149048
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Entry
115149048 CDS
T08542
Name
(RefSeq) transcriptional regulator ATRX-like
KO
K10779
transcriptional regulator ATRX
Organism
stru
Salmo trutta (river trout)
Pathway
stru04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115149048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115149048
03036 Chromosome and associated proteins [BR:
stru03036
]
115149048
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
115149048
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
115149048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
C5HCH
Motif
Other DBs
NCBI-GeneID:
115149048
NCBI-ProteinID:
XP_029547386
LinkDB
All DBs
Position
15:complement(40666042..40701922)
Genome browser
AA seq
1984 aa
AA seq
DB search
MSSEMLSVPPGTSKLDVLVTKLHEFLAHAPEDDEDRLVTESPDGMTNKDCVEPHSTDRTP
LEPQQTSTDTLKQSGCGSRRKPSVVIKHSGLDESGASNESDDDDDGLIINSNGYPDVSRL
PKGTVLVRPEPVENVRDDFRGPEFRCGKSGNLKRAFSRRRGGGEHLEIVSCTACGQQVNH
FQRDSFYQHPVLKVLICKSCFKYYSSDDISKDCDGMDEQCRWCAEGGNLICCDFCPNAFC
KKCILRNLGRKELSGILDEESKWYCYVCSPEPLLDLVVACDNVLDNLGHLWPDHRKRGRG
EGKSGHYDSHPRHSQNIPVGHWNHSGMDGHVVFNYNTLQIPEEMAKKAKNLVDSTNTVNT
TFVKFIQGGMQQKQTTELKLQYLKTFQSVLKGLKKSQTALEEALLEEFREMGLPNGGENP
TFDDTDVPQQEQEGCVEIDISDKNGLHYLKKIAAEHLEENDSDSNGFMDDGRPSSSIEMK
GVLGTEIIPRRGRGRPRKNSKPGEDACNVTKQLVVQISPAPVEQEPLSGPPELEVEVELE
AEEEEEEGKEKVEEREGDCESIELVTEGEYESAEGSESLELEEEPDNRRSPRVKTTPLRR
PGEGKTQPTPSGADSESDSDPDTSPNAEVPQGADEGGLGRGTDDSDSDEVPAVLQRAAMT
RSSDEAESDDGDHRSVTKKCLFGLKKNTPLSPERVVRKRKVPDHSSDSDSSSDDLDLQKE
IKTMTRPRGRPRKVKREDEPTPSKNSPQHRPRGRPRKVKKEDESTSSKEGNTQAAKPQST
PQSEHRTKQTPSSSSQEEGDLDSESSDDSGDQKIKPITEEVALLGAAAFHQSSGDEEHPQ
SGPSWAAEDDDDPENRIAKKMLLAQIKANYSSGEDFSSDVESSHDDESDREEKEQEDGKD
ESSDENGETSSLTSDSESSKTRHRHRLLRHKLSLDNGNPSDQKTAEENGIEQKVRKSRRT
KGEKLDSQSSDDDSQSQQEESGMSEELSQSENEGNEQMLKSSTSSSSRVERESVRSYLQK
KQQPSYIVLSDSSVDKSDDEEKDGEEGDNKGTPKGRKKIRRIIVDEHLRSETQRALKEEE
ERRRRLAEREQREDFREVIVIEDEASHVTCPITTKLVLDQDEGTNEPLIQVHRNLVTRLK
PHQVDGVQFIWDCCCESVKKANSTPGSGCLLAHCMGLGKTLQVVTFLHTMLQSKCMNFRT
ALVVCPLNTILNWVNEFEKWQVDMGADKVKVTELATLKRPQERYIALQRWQMDGGVMIMG
YEMYRNLTLGLKVIHGKFKKTFDSTLVNPGPDFVICDEGHILKNEASNISKAMSAIKTKR
RVVLTGTPLQNNLNEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTPRDVRIMKN
RAHVLHAMLAGCVQRRDYSALTKFLPPKHEYVMAVRVTPLQYRLYRYYLDNFTGARSVVE
GARGKAGTSLFKDFQILSRIWNHPWCLQLNYISKENKGHFDGKHQGKTERKEKENKGKVV
NADEDSKDVVILVWNSTSKGVNVEGDQQAGPLVPVVKALRASTSFRPDSPAADWYKSMLS
DSDATILGHSGKMVLLFEILRMAEELEDKVLVFSQSLITLDMIEDFLDLTNKAKNNRQSS
LYKGDGSWIRNTDYYRIDGSTSATSRMKWVQEFNDATNERGRLFLISTRAGSLGINLVAA
NRVIIFDASWNPSYDIQSIFRVYRFGQLKAVFVYRFLAQGTMEEKIYDRQVAKQSLSFRV
VDQQQIQRHFTLFELTELYMFEPDLLDDPNSEKKSKRTTPLLPKDMVLAELLQSCKGQIV
CYHEHESLLDHKEEEELSEADRKTAWAEYEAEGAFFLNKAEHSNTNVPSPSTSTMAVSLS
SLYKKTNGQLKNMIYSSCEKVNEAIKSLHSLLNLSLDDYVLRLSQDNPSVDEKQVRALAQ
TWKTSNDKERERRQALHHDLLAKQQSLTMCIQTILASRNTEITHTATVTNHTPALTDSAN
KPTQ
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcagagatgctcagcgttcctcctggcacgagcaagctcgatgtgttggtgacc
aaactgcatgaattcttggctcatgctccagaggatgatgaggacagactggtgacagaa
agtcctgatggtatgacaaacaaggactgtgtggagccacactcaacagaccgaacccct
cttgagcctcaacagacctcgacagacaccttgaagcagtctggatgtggttccaggaga
aaaccttcagttgtaattaaacacagtggactggatgaatctggtgcttcaaatgaaagt
gatgatgatgatgatggcttgatcatcaattcaaatggttatcctgatgtatcaagatta
cctaaaggcactgtacttgtgaggcctgagccagtggaaaatgtcagagatgacttcaga
ggtcccgaattccgttgcggaaaatctggaaatctgaagagagctttttctaggagacgt
ggaggtggtgaacacttggagattgttagctgtacagcctgtggccagcaagttaaccac
ttccagagggactccttctatcagcatccagtactcaaagtacttatttgcaagtcttgt
ttcaagtattactcaagtgatgacatcagcaaggattgtgatggcatggatgaacagtgc
agatggtgtgcagaggggggaaacctgatctgctgcgacttttgccccaatgccttctgt
aagaaatgcattttgcggaacctggggcgaaaagagttgtctggcatcctggatgaggag
agtaagtggtactgctacgtatgcagcccagagcctcttctggacctggtcgtcgcttgt
gacaacgtccttgacaacttggggcatttgtggccagaccaccgcaagaggggcagaggc
gagggaaaatctggacattatgactcccatccaaggcattctcaaaacattcccgtgggt
cattggaaccatagtggcatggatggtcacgttgtgttcaactacaacacccttcaaatt
ccagaggagatggccaaaaaggctaaaaacctggtggactcaacaaacaccgtaaacaca
acttttgtgaagttcattcaaggtggcatgcagcagaaacagacaactgagttaaagcta
caatacctgaagactttccagtcagtactgaagggtctgaagaagtctcagacagctctg
gaggaagcccttttggaggagttcagagaaatgggtttgccaaatggtggcgaaaacccc
acgtttgatgatactgatgtacctcaacaagaacaagagggttgtgtggaaattgacatt
tctgataagaatggccttcattacttaaagaaaattgcagctgaacatttggaagagaat
gattcagactcaaatggctttatggatgatggaaggccttcgtcctcaattgaaatgaaa
ggtgtccttggcacagagataattcccagacgaggtagaggcaggccgcggaaaaactca
aagcctggagaagatgcttgcaacgtgacaaaacaactggtggtgcaaatttcacctgcc
cctgttgaacaagagccactctctggccccccagagttggaggtggaagtggagttggag
gcagaggaggaagaggaagagggaaaagaaaaagtggaggaacgggagggagactgtgaa
tctattgaacttgtaacagagggggagtatgaatctgctgagggaagtgaatctctggaa
ctggaagaggaaccagataatagacgctcacctcgggtaaagaccactcccttgcgcagg
ccaggtgagggcaagacccagcctaccccctcgggtgcggacagtgagagtgactcggac
cctgacaccagccccaatgctgaagtgcctcaaggagctgacgagggagggcttgggaga
ggaactgatgactctgactccgatgaggtcccagctgtcctccagcgggccgccatgacg
cgcagttcagacgaagccgagagtgacgatggagaccatcggagtgtgaccaagaaatgc
ctcttcggcctgaagaagaacacgcccctctctccagaaagagttgtccgcaaacgcaag
gtgccagaccactcctctgactctgattcctccagtgacgatctggacttgcagaaggag
atcaagactatgaccaggcccagggggaggcctcggaaggttaagagagaggatgaacct
acccccagcaagaacagtccgcaacataggcccaggggcagacctcggaaggtcaagaaa
gaggatgaatctacatccagcaaggagggtaatacccaggcagccaagcctcaaagcaca
cctcaatctgagcatagaacgaagcagacgccatcctcttccagtcaagaagagggggac
ctggactctgagtctagcgatgacagtggtgaccagaagatcaagcctatcactgaggag
gtggccttactgggggcagcagctttccaccagtcgtccggcgatgaagagcatccccag
tctgggccttcttgggcagcagaagatgatgacgatccagaaaatagaatcgctaagaaa
atgctcttggcccaaatcaaagccaactactcatcgggggaggatttctcttcagacgtg
gagtcatcacatgatgatgaatctgacagggaagagaaggagcaagaagatgggaaagat
gaaagctccgatgagaatggggagacctccagtttgacctctgactctgagtccagtaaa
acacgtcacagacatcgtctgctacgccacaagctcagccttgacaatggaaatccaagt
gatcagaaaaccgctgaagaaaatgggattgagcagaaagtcaggaagtctagaagaacc
aaaggtgagaaattggatagccagagtagtgatgatgatagccaatcacagcaggaagag
tctggtatgagtgaagagctgagccaatcggagaacgagggcaatgaacagatgctcaaa
agctctacatcatctagctctagagtcgagagggaatcagtccgtagttatctacagaag
aagcagcaaccctcatatattgtgctgtctgactccagtgtcgataagagtgacgatgaa
gagaaggacggcgaggaaggggacaacaaaggtacacctaagggccgcaagaagatccgc
aggatcatcgtagacgagcaccttcgctcggaaacccagagagccctgaaggaggaggag
gagagacgcagacgcctggcagaaagagagcagagggaggacttcagagaggtgattgtt
attgaggatgaggcgtctcatgtgacctgtcccatcaccactaagctggtcctggatcag
gatgaggggacaaatgagccactcatccaggtgcacaggaacctggtgaccaggctcaag
cctcaccaggtggatggtgtgcagtttatttgggactgttgttgtgagtctgtgaagaag
gccaattcaacccctggatcaggctgcttactggcccactgcatgggcctagggaagaca
ctgcaggtggtgacatttctccatacgatgctgcagtcaaagtgcatgaacttcaggact
gccctggtggtgtgtccactcaacacaatcctcaactgggtcaacgagtttgagaagtgg
caagttgacatgggagctgacaaagtcaaggtgacagagttagccacactgaagcgacca
caggagcgttatattgccctgcagagatggcagatggatggtggtgttatgatcatgggc
tatgagatgtaccgtaacctcacactaggcctcaaagtcatccacggaaaattcaaaaag
acctttgacagtactctggtcaatccaggtccagactttgtgatctgcgatgagggtcac
atcctgaagaacgaggcatccaacatctctaaagctatgagtgccattaagaccaaaagg
agggtggtactgacaggcacaccactgcagaacaacctcaatgagtaccactgcatggtc
aacttcatcaaggaaaaccttctgggctcaatcaaggagttccggaatcgctttatcaac
cccattcaaaatggccagtgtgcagactccaccccaagagacgtccgcatcatgaagaat
cgcgcccatgtccttcatgcaatgttggcgggatgtgtacagagaagagactactcagcc
ttgaccaagttcctgccccctaaacatgaatatgttatggcagtgagggtgacccctctc
cagtacagactgtatcgctactacctggacaacttcactggagctaggtctgtggttgag
ggagccaggggcaaagccggaaccagccttttcaaggacttccagatactcagccgaatc
tggaaccatccctggtgtctgcagctcaattatatcagcaaagaaaataagggccatttt
gatgggaagcaccaggggaaaactgagaggaaagagaaggagaacaaggggaaagtggtg
aatgctgatgaagacagcaaggatgtggtgatcctggtgtggaacagcacatcaaagggt
gtcaatgtggaaggagaccagcaagcaggtccactggttccagtggtaaaagcgttgaga
gcgtccaccagtttcaggcctgacagtccggctgcagactggtacaagtcaatgctgagt
gactctgacgccaccatcctggggcactcagggaagatggtgctgctgtttgagattctc
agaatggcagaggaactggaagacaaagtgttggtgttcagtcaatccttgatcacatta
gacatgattgaagatttcttggacctcaccaacaaagccaaaaacaacaggcaatcatcc
ctatacaaaggtgatggcagctggatcagaaacactgactattaccgtattgacgggtcc
accagcgccacatccaggatgaaatgggtgcaagagttcaatgatgccaccaacgagcgg
ggtcgtctgtttctcatctcaacaagagctgggtcccttgggatcaacctggtagcagct
aacagggtcataatttttgatgcttcatggaatccctcctatgacatccagagcatcttc
agggtgtaccgttttggccagctgaaggctgtgtttgtctaccgtttcttggctcagggc
accatggaggaaaagatctacgaccggcaggtggccaagcaatcactgtcgttccgggtg
gtggaccagcagcagatacagagacacttcacactgtttgaactgacggagctctacatg
tttgagccagacctgctggatgacccaaactctgagaagaaaagcaagaggaccacaccc
ctgctgcccaaggacatggtgctggcagagctgctgcagagctgtaaggggcagatcgtc
tgctaccatgaacacgagtccctgctggaccacaaagaggaggaggagctcagtgaggct
gaccgcaaaactgcctgggctgagtacgaggcagagggtgctttcttcttgaacaaagca
gaacacagcaacaccaacgttcccagcccctccacctccactatggctgtcagtctgtca
tccctgtacaagaaaactaatgggcagctgaagaacatgatttattctagctgtgagaag
gtcaacgaggccatcaagtccctgcattccttactgaacctctccctggatgactatgtg
ttgcgcttgtcgcaagataacccaagtgtagatgagaagcaggtgagagccctggcccag
acctggaaaaccagcaatgacaaggagcgggaacgacgacaggccttacatcacgacctt
ctagcaaaacaacaatcacttacaatgtgcatccagaccattttggccagtagaaacacc
gaaattacccatactgccacggtcaccaatcacacaccagctctgacagattccgccaat
aaacctacacagtga
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