Salmo trutta (river trout): 115149053
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Entry
115149053 CDS
T08542
Name
(RefSeq) nuclear pore glycoprotein p62
KO
K14306
nuclear pore complex protein Nup62
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115149053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115149053
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115149053
SSDB
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Paralog
GFIT
Motif
Pfam:
Nsp1_C
TP0873_N
Motif
Other DBs
NCBI-GeneID:
115149053
NCBI-ProteinID:
XP_029547393
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All DBs
Position
15:40763750..40774226
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AA seq
573 aa
AA seq
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MSGGFNFGQASNTGFSFGAPKTTAATAPATGFGMPSAAAPGGGFSFGTPSTPQAPVAAPQ
SSGLFAMPTQGSTNPTGGFSFGTPAQSSTPAGGGFSFGTPIAKLNLGTPAASQPAPTGLT
MGMATPSSGTGFGLGGGLATQTTAAPAGGGFSFGTAGGLGAPVAQTQPQTQPAAAGGLSL
GTPAAATQIMGGGFSFGAAKVQASTAPAPTVTAGGGFSFGNSTPASLSLGTQPTSLTLNS
VASTAAPTTTQVGGFAFGVKPATPAPAATAPATQASLGSSLFAVPASTAAPATAAIAGFL
GAAPAATSTAGSTLGFMLKPLGAVTATTTAPVGTAAPTTTTGFSLAMKPAGAIGIGVTAP
ITGVATTISTVTASAPPVMSYIQLEGLINKWSLELEDQERHFLQQATQVNAWDRTLVENG
EKITSLHREMEKVKLDQRRLDQELDFILSQQKELEDLLSPLEESVKEQSGTIYMQNADEE
RERTYKLAENVDAQLKRMSQDLKEIIEHLNTSSGPADNSDPLQQICKILNAHMDSLQWID
QNSVLLQRRVEDVSKLCDNRRKEQEKTFRITFN
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaggattcaactttggacaagcgtccaatactggattcagctttggagctccc
aaaaccacagctgcaactgccccagccacaggctttgggatgccaagtgctgcagctcca
ggtggtggcttctctttcggaacccccagcactccccaggccccagtagctgccccccag
agttctgggctgtttgctatgcccacccagggtagcacaaacccaactggagggttcagc
tttgggacccctgcacagagcagtactcctgcaggaggaggcttctcttttgggactccc
attgctaaactcaatctgggtacaccagccgcctctcaacctgcaccgactgggctaact
atggggatggcgaccccctcctctgggacaggctttggacttggtgggggtctcgccaca
caaaccactgctgcccctgcaggaggggggttcagctttgggaccgcaggggggcttgga
gcccctgttgcccaaactcaaccccagacccaacctgctgcagctggtggactctcttta
ggaactcctgctgcagccacccaaattatgggaggtgggtttagttttggtgcagccaag
gtccaggccagcacagccccagcccctactgtaaccgcaggagggggcttctcatttgga
aacagcacacctgccagcctctccctggggacccagcccacaagtctgactctgaactct
gtggcctcaacagctgcaccaaccacaacccaggttggaggattcgcttttggcgtcaaa
cctgctactccagccccggctgcaactgccccggctacccaggcctcattaggttcttct
ctttttgctgtaccagcatcaacagcagctcctgctacagcagcaattgcaggatttttg
ggcgctgccccggctgccacctcaacagcgggaagtaccctgggcttcatgctcaaaccc
ctgggagcagtcactgccacaactactgccccagttggcacagctgcccctaccacaacc
acaggtttctcactggctatgaaacctgcgggtgccattggcattggtgtaacggccccc
atcactggcgtagccacaaccatctctactgttactgcaagtgctcctccagtgatgtca
tatatccaactagagggtctcattaacaagtggagtcttgagttggaggaccaggagagg
catttcttacagcaagccacccaggtcaacgcctgggaccgcacgctggtggagaacgga
gaaaagatcacatcactgcacagggagatggagaaagtgaaattggaccaaagaaggctg
gaccaggaactggacttcatcctgtcacaacagaaggagctggaggacctgctgtcccca
ctggaagagtctgtcaaagaacagagtggaaccatctacatgcagaacgcagacgaggaa
cgcgagaggacgtacaagcttgcagagaacgtggacgcccagctgaagaggatgtcccaa
gatctaaaggagatcattgaacacctgaatacatccagcgggccagctgataacagtgac
ccgcttcagcagatctgtaaaattctcaatgcccacatggactctcttcaatggattgac
cagaactcggtgcttctacagagaagggtggaggatgtgtccaaactctgcgacaaccga
cgcaaagagcaggagaagacttttcgcataacatttaattaa
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