Salmo trutta (river trout): 115149066
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Entry
115149066 CDS
T08542
Symbol
stau2
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
stru01009
]
115149066 (stau2)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115149066 (stau2)
Protein phosphatases and associated proteins [BR:
stru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115149066 (stau2)
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
115149066 (stau2)
mRNA cycle factors
Stress granule specific factors
115149066 (stau2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Dicer_dsRBD
DUF3195_C
COA2
Motif
Other DBs
NCBI-GeneID:
115149066
NCBI-ProteinID:
XP_029547423
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All DBs
Position
2:2606978..2907971
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AA seq
674 aa
AA seq
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MAQVKVQTSTPLAGPGFSSLSPLGAMPSPGPLGLQPSVNGPGPTPGCPAPSAGYGPDTPV
SANSPGPPQENMANPKEKTPMCLVNELARFNRIQPQYKLLNERGPAHAKIFTVQLCLGEQ
VWEAEGTSIKKAQHSTASLALTESLLPRPAPRSPTVDINSNPGSITPTVELNGLAMKRGE
PAIYRPLDPKPMPNYRANYNFRGMFNQRYHYPVPKIFYVQLSVGTNEFIGEGRTRQAARH
NAAMKALQALRNEPIPERSPQSPEEQKEVDEGSDASKSEISLVYEIALKRNLSVCFEVLK
ESGPPHMKSFLTRVSVGEFSAEGEGNSKKLSKKRAALSILQDLKKLPFTPLVEKPKLHYK
KRPKTILKTGPDYGQGMNPISRLAQIQQAKKEKEPEYLLLSERGMPRRREFIMQSVQVKV
CGEVATGTGPNKKVAKRNAAEAMLLQLGYKASTCPQSPTEMDDKGWNEQKMAFNETPTNT
QKGLLHLSPDVYQEMEASRKQGTPVNYLTPKLSDPLVVPVSPGHTPYYSPPAVATAAMAR
ELLMNGSGDGRSGENVGLKGKSSVQPSQQLEYLARIQGFQVLYSDGQNGREFMTYLTLSP
VRCFPRHRELHRSQPRPGCSKCLETAVGAGTGHGGLPYQEQRGVCQRGRTLKQTNSGTTH
HSGRHGYNRLSSRR
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagtgaaagtgcagacctcaacgcccctggctggccctggcttctcctcgctg
tctcccctcggggccatgcccagtccaggacccttgggtctacagccctcagtcaatggc
cctggacccacccccggctgccctgctccctcagccgggtatgggcccgacacccctgtg
tctgccaactcaccaggcccaccccaggagaacatggcaaaccctaaagagaaaactcct
atgtgtctggtgaatgagttggcccgtttcaacaggatccaaccgcagtacaagctgctc
aacgagagaggccctgcacacgctaagatctttacagtgcagctgtgtctgggggagcaa
gtgtgggaggcggagggcacaagcatcaagaaggcccagcactccaccgcctctcttgcc
ctcactgagagtcttctgcccaggcccgctcctcgctctcctacagtggacatcaacagc
aacccaggtagtatcacccctacggtggagctgaatggtctggctatgaagagaggtgag
ccggccatctaccgtccgctggaccccaagcccatgcccaactacagagccaactacaac
ttcagaggcatgttcaaccaaaggtaccactacccagttccaaagatcttctatgtgcag
ttgtctgtgggcactaatgagtttattggagagggccggactcgccaggcagcccgtcac
aacgctgctatgaaggccctgcaagccctccgcaatgaacccatacctgaacgatcacct
cagagccctgaggagcagaaggaggtggatgaggggagtgatgcctctaagtcagaaatc
agtctggtttacgagatagccctcaagaggaacctgtctgtctgcttcgaggtcttgaag
gaaagcggtccccctcacatgaagagcttcctgacccgtgtgtccgtgggggagttctca
gcagagggcgaggggaacagtaagaagctgtctaaaaagagagctgctctctccattctc
caggacctcaagaaactccccttcaccccgttagtggagaaacccaaactacactacaag
aaacgccccaagaccatcctcaagacaggtcctgattatggccaggggatgaacccgatc
agcaggctggctcagatacaacaggccaagaaggagaaggaaccagaatacctcttactg
tctgagagaggcatgccccgacgcagggagttcatcatgcagtctgtgcaggtgaaggtg
tgcggcgaggtagccacgggaacagggccaaataagaaggtggcgaagcggaatgctgcc
gaggctatgctactacagctgggatacaaggcctccacctgcccacagagccctactgag
atggacgacaaaggctggaacgaacaaaagatggcttttaacgaaactccaactaacacc
cagaagggtctgctccacctctccccagacgtctatcaagagatggaggcgagcaggaaa
caggggacccccgttaactacctgacccccaaactatctgaccccctggtcgtccccgta
tcccctggacacaccccctactacagcccccccgccgtcgccacggcagccatggcgagg
gagctgttgatgaacgggtctggagacgggaggtccggggagaacgtgggtctgaagggg
aagagctctgtccagccctcacagcagctagagtacctggctcgcatacagggcttccag
gtgctgtacagcgatggtcagaatggtagagagttcatgacctacctgacactctcacct
gtaagatgctttccacggcatcgggagctccatcgaagccagccacgaccaggctgctct
aagtgccttgaaacagctgtcggagcagggactggacacggtggactgccctatcaagag
cagcgaggtgtgtgtcagagaggacggacactaaaacagactaactcaggcaccacccac
cactcaggtcgccatggatacaacaggctgtcgtcaaggagatga
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