Salmo trutta (river trout): 115149165
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Entry
115149165 CDS
T08542
Name
(RefSeq) calponin homology domain-containing protein DDB_G0272472-like
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
stru
Salmo trutta (river trout)
Pathway
stru04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115149165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115149165
Membrane trafficking [BR:
stru04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
115149165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
115149165
NCBI-ProteinID:
XP_029547617
Ensembl:
ENSSTUG00000032586
LinkDB
All DBs
Position
15:complement(46690555..46731138)
Genome browser
AA seq
1392 aa
AA seq
DB search
MSLSDQSRQWYPTSVQVTVVQARRLRIKGRNGTNDAYAIMQVAKDKFATSVAEKSVAPVW
KEEATFELPLFHNGNTEKCTLHVHVMHRALVGPDTLLGQAVINLLELSEVKSRNKTEWHK
LLDKAGKPDKDRGEVQVDIQFLKNNMTASMFDLSATDKPHSRLGKFKDKVRGKKEGLSDT
ASAVVPSFTQVLTDSEGEGEGVGKGGADKGEKKKKNKLKSLFSPKSNLQRHGLSQSMSVL
GPLPEKNSSLSSSRSTGLSVDSSEGKNKFKFLTHKRTGSSLSLGRSKIPAPLAERSNLCI
NGTHMYTEEPQPRSARTGSNFSLASSGHGSMEDLRKAQGRKSSGTSMDSFRALKQPSTWA
EEEERVMLDEERKRKEEQEKQEEDMQRRGEEERKMREEEERLRREQEDILRRIREVEEEE
ERRAEERMKREAEEERMKREDDRLRKEEEEKRRRIEAEEGRMKREQDRVKEEEEERRRFA
EEEGRMKREDDRLRKEEEEEKRRRIEAEERMKREAEEEKMKREEDRVRKEEEEERRRFEE
GEQRIKREAKEERMKREEDRLREEEEEEERRIEEEDQRIKREEDRLRKEERRMREEEERV
RKAAEEDWLSEEMGIKRMEKDKRIKREEEDRLRKEEELRKIRENEERLRREEEDDMQRKE
EEQRKMRNEEERRIEQEMLRKEEAERTRLEEEREEERRSDEEQRELMEVKERFRVDEENM
KKEELRGQEEKMTEKEKKRNAQMEEKQRHEEVRVKLDKVEQQMKQNKEAETIVCNNPFED
VSPTTSFDDNSSNNPFEETPTTSSTGPISCRTNKVSAVKPRPSSWVNPSQPSVSSNPFLS
FLSPEMEISMDSPRVDGETRGAQDPSTDLMEKKDPALLPPNNQRWARMDNWPSKGNAHSV
TVNLAQTKPTKQPPPPRHQSSTSLVECGDYQESVSGQDQSSIRMDKGPAPDRPSQAPSQT
QRDQSMTRVNLGHKDIVGASMSKVSQRVVQMITPLRFSSTATTEHTSGGQSSTHHGKQPE
QHMPSATGGLRVAKHNKGPAPSRPQYPPGKTMPKVDVLDKQLNAEEHDSLVEFDTNNPFA
EYCRMEKSSGHGEEQRLTGEHQESLDSHNHQTCTSTEANPGSMQNSVVGDSMELPTPDVL
LAEDGSRPIKNTLAKRVCVPLPPLKKTSTSREEDTGKQSSVKLQSPGASSLSNLSSSISE
KMQNRGVGVALTCVNIAQPPCVPSPAPPFLPQPKPLKRSGGRSNCPPQTSSLPGQRTLLQ
AGAMSSVAEHCSGEEAGGRGDRPTSSTRRPHPVKPLSFLENQPASNIQGGQTSISTGILG
VLQEKLKVKDTGVKGQYSQLTQEELISLVVKQQDQLSKRDNKIKELEQYIDNLLVRIIEE
QPSILMSMNSLK
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgtctctatcagaccagagccgacagtggtatccgaccagtgtacaggtaactgtggtt
caggcaagacgcctgaggataaaggggagaaatggcaccaacgacgcatacgccatcatg
caagtggccaaggataaattcgctacatccgtggcagagaagagcgtggcaccggtgtgg
aaagaagaggccacgttcgagctgccgcttttccacaacggtaacacagaaaagtgtacg
ttgcacgtccacgtaatgcaccgggcactcgtgggacctgacacgttgctcggccaagca
gtcatcaacctgttggagctcagcgaggttaaatcccgtaataagactgaatggcataaa
ctgctggacaaggcaggcaagccagacaaagaccggggagaggtgcaggtggacatccag
tttctgaagaataacatgacagccagcatgttcgacctctctgctacagacaagccacac
tcccgcctgggaaagttcaaggacaaggtgcgaggcaaaaaggagggtctgtcggacact
gcgtctgccgtggtaccgtccttcacccaggttctgacggacagcgagggggagggagag
ggggtagggaaggggggtgcagacaaaggagagaaaaagaagaaaaacaagcttaagtct
ctgttttctcccaagtctaacctgcagcgtcacggactgtctcagtccatgtctgtcctt
ggccctctgcctgagaagaactcctcactgagtagcagccgctccacaggcctcagtgtg
gactcctctgaaggtaaaaataaattcaagtttctgacccataagcgcacaggcagttcc
ctgtccctagggcgctctaagattcctgccccgcttgcagagcggagtaacctgtgcatc
aacggcactcacatgtacacagaggagccccagccccggagcgcccgcactggctccaac
tttagcctggccagctcaggtcatggctccatggaagacctgcgcaaggcccagggtcgt
aagagctccggcacctccatggactccttcagggccctgaagcagccttcgacctgggca
gaggaggaagagagggttatgttggatgaggagaggaagagaaaggaagagcaggagaaa
caggaggaggatatgcaaagaagaggggaagaggagaggaagatgagggaggaggaagaa
agactaaggagggaacaggaggatatactgagaagaataagggaggtggaagaagaagag
gaaaggagggctgaagaaagaatgaagagagaggctgaagaagaaagaatgaagagagag
gatgataggctgaggaaggaggaggaagaaaagaggaggaggattgaggctgaagaagga
agaatgaagagagagcaggacagagtgaaggaggaggaggaagaaaggaggaggtttgcg
gaggaagaaggaagaatgaagagagaggatgatagactgaggaaggaggaggaagaagaa
aagaggaggaggattgaggcagaagaaagaatgaagagagaggctgaagaagaaaaaatg
aagagagaggaggaccgagtgaggaaggaggaggaggaggaaaggaggaggtttgaggag
ggagaacaaagaattaagagagaggctaaagaagaaagaatgaagagggaggaggatcgg
ctgagggaggaggaggaggaagaagaaaggaggattgaggaagaagatcaaagaattaag
agagaggaggataggctgagaaaggaggagagaaggatgagggaggaggaagaaagagtg
aggaaggccgcagaggaagattggctgagcgaggaaatggggataaagaggatggagaag
gacaaaagaattaagagggaagaggaggataggctgagaaaggaggaagagctgaggaag
attagggaaaatgaagaaaggctaaggagggaagaggaggatgatatgcagagaaaggaa
gaagagcagaggaagatgaggaatgaggaggaaaggagaatagagcaggagatgttgaga
aaggaagaagcagaaagaacaaggcttgaagaagaaagggaagaggagagaagaagcgat
gaggagcagagagaactgatggaggtgaaagagaggtttagggtggatgaagaaaatatg
aaaaaagaggagttgagaggacaggaagaaaagatgacagagaaggagaaaaagaggaat
gcacagatggaggaaaaacaaaggcatgaggaagtgagggtaaagttggacaaagttgaa
caacagatgaagcagaataaagaggcagagaccatcgtgtgcaataatccttttgaggat
gtctctcctaccacttcatttgatgacaactcttcaaataacccgtttgaggagaccccc
acaacctcttctactggtcccatcagctgccgaacaaataaagtatcagcagttaagcca
agaccctcttcatgggtgaacccttctcagcctagtgtgtcttccaaccccttcttatcg
ttcttgtctcctgaaatggagatttctatggactcccctagagtcgatggggaaaccaga
ggcgcccaggacccgtctactgatctaatggagaagaaagaccctgcccttctgcccccc
aacaaccagcgctgggctcgtatggacaactggcctagcaagggcaacgctcattctgtc
acagtgaacctcgcccaaacaaagccaacaaaacagccaccacctccaaggcatcaatct
tccacgtcactggtggaatgcggagattaccaggagagtgttagtggtcaggaccagtcc
agtatcaggatggacaagggtcccgctccagacagaccaagccaggctccaagccagaca
cagagggaccagagtatgactagagtgaacctgggacataaggacatagtaggtgcctcc
atgtccaaggtctctcaacgtgtggtacagatgatcacaccactgagattttcctccaca
gctacaacagaacacacaagtggaggccagagctctacccaccatgggaaacaaccagaa
caacacatgccatctgccactggggggttgagggtggctaaacacaataaaggtccagca
ccttctaggccccagtaccctccagggaagacaatgccaaaagttgatgtattagataag
caattgaatgctgaggaacatgactctttggttgagtttgatacaaataatccctttgca
gaatactgcagaatggagaagtcctctggacatggtgaagaacagagactaactggtgaa
catcaggagagcctagactctcacaatcatcagacttgtacctccacagaagcaaatcca
ggttcaatgcagaatagtgtggttggggactcaatggagcttccaacgccagatgttctg
ttagctgaggatggctcccgtcccatcaaaaacacattagcaaagcgggtctgtgttccc
ttgccgccattgaagaaaacatccacatctagagaggaggatactggtaaacagagttct
gtaaaactacaaagcccaggggcttcctctttgagtaatctttcctcaagtatctcagaa
aaaatgcagaatcgcggtgtgggtgtggcactaacttgtgttaacattgcccagccccca
tgtgtaccctcacctgccccccccttcttaccccaacccaaacccctgaagagatcaggg
ggcaggagtaactgtcctccccagacaagctctctccctggccagaggaccctgcttcag
gctggagctatgtcctccgttgcagagcattgcagtggagaggaggcgggagggagaggg
gacaggcctacctcaagcacacgcaggccccatccagtaaagcccttgagcttcctggaa
aaccagccagcctccaacatccagggggggcagactagcatatctacaggaatcctcggt
gtccttcaagagaagttaaaggtcaaagacacaggggtcaaaggtcagtactcccagctg
acccaggaggagctgatctccctggtggtgaagcagcaggaccagctctccaagagggac
aacaagatcaaggagctggagcagtacattgacaacctgctggtgcgcatcatcgaggag
caacccagtatcctgatgtccatgaactcactcaaatga
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