Salmo trutta (river trout): 115149206
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Entry
115149206 CDS
T08542
Name
(RefSeq) serine/arginine-rich splicing factor 9-like
KO
K21123
serine/arginine-rich splicing factor 9
Organism
stru
Salmo trutta (river trout)
Pathway
stru03040
Spliceosome
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115149206
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115149206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115149206
Spliceosome [BR:
stru03041
]
Common components
Common spliceosomal components
SR proteins
115149206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
RRM_occluded
Nup35_RRM_2
DUF2457
Motif
Other DBs
NCBI-GeneID:
115149206
NCBI-ProteinID:
XP_029547708
Ensembl:
ENSSTUG00000005329
LinkDB
All DBs
Position
15:48021722..48025998
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AA seq
248 aa
AA seq
DB search
MTDGRIYVGNLPMDVQEKDIEDLFFKYGKIRDIELKNNRGTIPFAFVRFDDPRDAEDAVY
GRNGYGFGDSKLRVEYPRSSGAKFSGPMGGGEGGGPRGRFGPPTRRSEFRVIVTGLPQTG
SWQDLKDHMREAGDVCFADVQRDGEGVVEFVRREDMEYALRRLDRTEFRSHQGETANIRV
HGERGASYGRSRSRSRSPRGRGYSPPYQSRGSPPQRYQSPPRRLVSRHSPPARRHPVPYH
SPPPRHYR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggaaggatctacgtgggaaatcttccaatggacgtccaggagaaggacata
gaggatctcttcttcaaatatggaaaaatccgggatatcgaactaaagaataacagggga
accatcccttttgcttttgttcgcttcgatgatccacgggatgcggaagacgcggtctat
ggaaggaatggatatggattcggagactccaagctgcgtgtagaataccctcgctcctct
ggcgccaaatttagtggccctatgggaggaggagaaggagggggtcctagggggaggttt
gggcccccaactcggagatctgagttccgggtgatagtgactggcttgccccaaaccggg
agctggcaggatctgaaagaccatatgcgtgaggcaggggatgtgtgtttcgccgacgtg
cagcgagatggtgaaggagtggtggagtttgtccgtcgggaggacatggaatacgccctg
cgcagactggacaggactgagttccgttcccatcagggggagacggcgaacattcgtgtc
cacggagagcgtggtgccagttatggtcgctcgcggtctcgctccagatccccacgaggg
cgtggctactcaccaccttaccaaagcagagggtcccctccgcagcgctaccagtcaccc
ccacgccgccttgtgtcccgccatagccccccagcgaggcgacacccagtaccgtaccat
agcccgcccccacgccactatcgatag
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