Salmo trutta (river trout): 115149214
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Entry
115149214 CDS
T08542
Name
(RefSeq) PDZ and LIM domain protein 5-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
stru
Salmo trutta (river trout)
Pathway
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115149214
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stru04990
]
115149214
Domain-containing proteins not elsewhere classified [BR:
stru04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
115149214
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
PDZ_2
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-GeneID:
115149214
NCBI-ProteinID:
XP_029547732
Ensembl:
ENSSTUG00000011721
UniProt:
A0A673XXK5
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Position
15:48352444..48461711
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AA seq
626 aa
AA seq
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MNSNYSISLGGPAPWGFRLQGGKDFCLPLTISRLTDGGKAAKAKMSVGDVVLSIDGIATN
GMNHLEAQNKIKACTDNLNLTLQKASSVPKADAPKDEPLEIIKPVPITHPAPPSTFTSPS
PQPGAAYNKTARPFGGGSSAGAVTSSLTAPKVASIPSASSAFTPAAPSSQQPQPPFPLAS
RSRSPAPPSSAPPPRPSSGRSPFTTPSSTPSSSSSSSPARVTAPSSNPGAPQSSCYNTPI
NLYSNANACEVAIGQRRGLLEAQGVVVDQIKEQFNGNKVEPELIHASPLSEASKKRLIED
TEDWHPRTGTSQSRSFRILAQITGTEKDQAQENSAGRNKVVENAPPSSHITTSVKTMTKV
PGAPRNGNSVPPPTFKTPSAQVKPSWPAGGSAGLSKGGAAPSFGRVSNTAPVPTVPKVSD
RPAPQAHPKDQKSLVQRAEHIAAGTRTPMCGHCDKVIRGPFLVAMGMSWHPEEFNCSHCH
MSLVESGFVEERGTVYCAHCYEKFFAPTCTSCQQKVLGEVINALKQTWHVYCFLCASCQQ
PIRNNTFHLEDGLPYCERDYYQLFGTSCHGCDFPIEAGDKFLEALGFTWHDTCFVCAVCN
TSLEGQAFFSKKDKALCKKHANTVTI
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaactacagcatctccctgggtggccccgccccctggggcttcagactgcag
ggaggaaaggacttctgtctgcccctcactatctcacggctgaccgatgggggcaaggca
gccaaagccaaaatgagtgtgggagatgtagttctgtctatcgacggaatcgccaccaac
ggcatgaaccacctggaggcccagaacaagatcaaagcctgcactgacaacctcaacctc
accctgcagaaagcttccagtgttcccaaggctgatgcaccaaaggacgagccactggag
atcattaagcccgtgccaatcacccatccggctccgccctccaccttcaccagcccctcc
ccccaacccggtgctgcctacaacaagacggcccgcccctttggcgggggcagcagtgcg
ggtgcagtcacttcctccctgaccgccccaaaggtggcctccatcccctctgcatcgtct
gctttcacccccgccgccccctcctcccagcagccccagcctcccttcccactagctagc
cgctcccgctccccagccccacctagctcagccccaccccccagacccagctctggccgt
tcccccttcaccaccccctcctccactccctcctcttcttcctcatcctccccggccaga
gtgacagccccctcctccaatcccggtgctccgcagtcctcttgctataacacgccaatt
aacctgtactccaatgccaatgcctgtgaggtggccataggacagaggcggggcctgttg
gaagcccagggtgtggtggtcgaccagatcaaagaacagtttaatgggaacaaagttgaa
ccagagttgatccacgcctcgcccctcagcgaggccagtaagaagcgtctgatcgaggac
acagaggactggcatcctcgcaccggaacctcccaatccaggtccttcagaatcctggct
cagatcaccggcacagagaaagaccaagcccaggagaacagcgctggaaggaataaagtt
gttgagaatgccccgcccagtagccacatcacaacatcagtgaagaccatgaccaaagtc
ccaggagcccccaggaatggcaacagtgtccccccacccaccttcaagaccccctctgcc
caggtcaaaccctcctggccagctggaggttcagcaggtttatctaagggtggcgctgcg
ccctcttttgggcgggtcagcaacactgcaccagtacccacagtacccaaagtttctgac
cgccccgccccccaggcgcaccccaaggaccagaagtccctggtacagcgggccgaacac
atcgcagcgggaacacgcacccccatgtgtggccactgtgacaaggtcattagaggtcct
ttcctggtggccatgggcatgtcctggcaccctgaggagtttaactgttcccactgccac
atgtctctggtggagtctggctttgtggaggaaagaggaacagtgtactgtgctcactgc
tatgagaagttcttcgcccctacctgcaccagctgccagcagaaggtcctgggggaagtc
atcaatgccctgaagcagacatggcatgtgtactgcttcctgtgtgcctcctgccagcag
ccaatcagaaacaacaccttccacctggaggacgggctgccatactgtgaaagagactac
tatcaactctttggtaccagttgccatggttgcgactttcccatcgaagcaggagacaag
tttctggaggcgttgggattcacctggcatgatacctgcttcgtgtgtgcagtctgcaac
accagtttggagggccaagccttcttctctaaaaaggacaaagctctgtgcaagaaacat
gccaatacagtcacgatctga
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