Salmo trutta (river trout): 115149228
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Entry
115149228 CDS
T08542
Name
(RefSeq) nipped-B-like protein B isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
stru
Salmo trutta (river trout)
Pathway
stru04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115149228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115149228
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
115149228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
Cnd3
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
115149228
NCBI-ProteinID:
XP_029547752
Ensembl:
ENSSTUG00000019825
LinkDB
All DBs
Position
15:complement(49211020..49276276)
Genome browser
AA seq
2681 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDEN
LVSQLAHSLNQVSTEHIELKDNLGSDDPEGDVPVLLQTVLSRNPNIFREKNIMQQPMMPQ
YKMSQNSMHGSPASTNYQQTTISHSPSSRFAPPQMGSDARFTPQQNSPVPSPYAPQSPAA
YMQQYPHPPSYSQHQQIQQGSPQRPVQPCLEVQTQPQASPHQNPSTPTLVASPMVPGGMR
NIHDNKVSGQISSNSANHNARHGSNEDYMNIVHRLGNEESDPSMRNASFPLRSPQSVCSP
AGSEGTPKAGLRPSLILHSPHPYASPRDSAPDLLLDSPDCKKKQKKLTKEEKEQLDKAAM
YDIVSSPSKDSTKLTLKLSRVKSSEMDQSGELLPGAEDQDTDLAYNSLQFCRTQQDPAHR
LGPGQGEQSGYQQVPVLQNTKQAGGVISGAVYDDAEMDALAEIERIERETLIERERCSKE
VQDKDKPLKKRKQDSYPQEPGAGGTAGATQPGVGGGNAGSKLAPQEASAASNGASRPALM
VSIDLQQAGRADGQPEVNIGTHTPALRSWPEERLCPGDGPDSTGVLRLNSKTEGDTLQTA
DVRPEVIKQRADTPKKLGPDVRPETPKHKHENRRDSSKHRHDGKPDNSKARPDARMPDKP
RQRHEGRSDSGHREDRSRDSDPSRIRRPETPSKSSRGEHDSKHGRDRDRERGDKDRERKH
RTEAGDPRDRRSPEQRSRPESPRVKQEGRGGVDHSGRQRTDRPGPNLKSPNKEERRSGEE
RRSGDGSRNRQDSKQQPVENKQEFPAYLLGGVKSGGFKNFVIPKVKRDKDGHVLAAEMRK
PGLGSVVEGWKEPRVKLERLGLVEKMKTAAKPVVVLQKLSIDEVQKIIRERKDRSARSSK
SSKSRPSHWISEKESTMPLCERVKMNKRKRSTIKEKPKYAEVNSDDDDDDDDSVTESMRK
RHKKEREKTWEPDERERRGSGRRGSGSRHRERSPEDSDDESPPPSMSDLVRKMKKKEKQK
KRKAYEPKLTAEELMDSSTFKRFSASVDNILESLEDIDFNAMDDDEIPQELLLGKHQLSE
LASESAKIKAMGITFRLSSGKLVKVLNILEKNIQDGSKLSTLMNHDADAEDEERLWRDLI
MERVTKSADACLTALNIMTSARMPKAVYIEDVIERVLQYTKFHLQNTLYPQYDPVYRVDP
HGGGLLSSRAKRAKSSTHKQRVIIMLYNKVCDIVSNISELLEIQLLTDTTILQVSSMGIT
PFFVESVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDK
DGEPMYIQMVTALVLQLIQCVVHLPNNRDSHDEYDKKVDQDVLITNSYETAMRAAQNFLS
VFLKKCGSKQGEEDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEM
ALRVASLDYLGTVAARLRKDGVTSKMDQRSIDRILRETQGNDETQQLQKALLDYMDENAE
TDPSLVFARKFYIAQWFRDTLTEMEKAMKSQNQRGDEDSSEGQHHAKDIETTGEIMQRAE
ARKKYLRNIIKTAPSQFSTLRMNSDTVDYDDSCLIVRYLASMRPFAQSFDIYLTQILRVL
GESAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLS
RPQLTEQYYDMLIERILDTGISVRKRVIKILRDICLEQPTFNKITEMCVKMIRRVNDEEG
IKKLVNETFQKLWFTPTPNHDKDAMTRKILNITDVVSACKDTGYDWFEQLLQNLLKTEED
AAYKPARKACVQLVDNLVEHILKYEESLTDIENKGVNSTRLVSCITTLFLFSKIRSQLMV
KHAMTIQPYLTTKCNTQSDFMVICNVAKILELVIPLMEHPSETFLTTIEEDLMKLIIKYG
MTVVQHCVSCLGAVVNRVTRNYKFVWACFNRYYGALTKLKTQHSEDSNNPVLAANKPALL
RSLFTVGALCRHFDFDEEEFKGPTKVVIKEKVMELLLYFTKHEDEEVQTKAIIGLGFQFI
QYPGLMFMQDVMSLYNGILSDRKSSVNLKIQVLKNLQTYLQEEDSRMQEADQQWKKLSKQ
EDLKEMGDISSGMSSSIMQLYLKQVLEAFFHTQSTVRHFALNVIALTLNQGLIHPVQCVP
YLIAMGTDPEPTMRNKADQQLVEIDKKYSGFIHMKAVAGMKMSYQVQQAIWSAKGTVIRG
YRQDETTSALCAHLFSMVRSNRQHRRAFLISLLNLFDDSSKMEVNMLLYMADNLACFPYQ
IQEEPLFIMHHIDITLSVSGSNLLQSFKESLLKEPRQREKKPKERKYQSEEENSSSSSSS
EEEHHRHSISSNSSDEDDEVVQRLKKPKHRAQAPVESDSDSDLEMEDLDKVMQRLPDNPI
PLLDFANASQGILLLLVLKQHLKNLYGFSDSKIQKYSPTESAKVYEKAVNRKGHVHFSPH
QTLDFLTSDLANVELTYDIKRRIVKQYLDFKLLMEHLDPDEEDEEGEASASANARNKAIT
SLLGGPSHQDHKNHHQDHKNHHQAPIETDDDESDGDEKTPVSSRRSRKHGDSAEASGHMN
EMLAARDVIALCCPKYKDRPQIARIIQKTNTGYRVQWMAGSYSGVWGEAKKRDGRKTVPW
VDTIKESDIIYKKIALTSAHKLTNRVVQTLRSLYSAKEGTS
NT seq
8046 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcactactcttgctgggatcgctagccttact
gacttgttaaaccagctgcccttgccatcccctctccccgccaccaccactaagagtctg
ctgttcaatgggaggatcgcggaggaggtcaactgtctgctggcctgccgggatgagaac
ctggtgtcccagctggctcacagcctcaaccaggtatccacagagcacatagagctgaag
gacaacctgggcagtgatgacccggagggagacgtgcctgtgctgctgcagacagtgctg
tctaggaaccccaacatcttcagggagaaaaatataatgcagcagccaatgatgccgcag
tacaagatgtcccagaactccatgcatgggagtccggcgtcgacaaactaccagcaaacc
actatctcacacagcccttctagtcgctttgcccctccacagatggggtcggatgccagg
ttcacgccccagcaaaacagccctgtgcccagcccctatgccccccaaagccctgctgct
tacatgcagcagtaccctcacccacctagctactctcagcaccaacagatccagcaagga
agcccccagaggcctgtgcagccctgcctagaggtgcagacccagccgcaggcctccccc
caccagaacccctccaccccaaccttagttgccagccccatggttcctggtggcatgcgg
aacatccacgacaacaaggtctccgggcaaatttcaagcaactcagccaatcacaatgcc
agacatggctccaacgaagactacatgaacatagtccacagactagggaatgaggagagt
gatccttccatgagaaatgcctccttcccactccgctcgccccagtctgtttgttcccct
gctggcagcgaagggaccccaaaagcagggttacgacctagcctcatccttcactcccca
cacccttacgcttccccccgtgacagcgctcccgacctcctcctggactctcctgactgc
aagaagaagcagaagaagctaactaaagaggagaaggagcagttggataaagctgctatg
tacgatatcgtcagctctccctctaaagactctaccaagctgaccctcaaactgtcccgg
gtgaagtcctctgagatggaccagtccggagagctcctacctggggcagaggaccaggac
actgacctggcctacaacagcctgcagttctgccggacgcagcaggaccctgcccacagg
ttagggccaggccagggggagcagtcaggctaccagcaggtccctgtgctccagaacact
aagcaggctggaggggtgatcagcggagctgtttacgacgatgctgagatggacgcgctc
gctgagatcgagaggatagaacgggagacgctcatagaaagggagcgctgctccaaagag
gttcaggataaagacaagccactgaagaagcggaagcaggactcgtatccccaagagcct
ggagctggaggtacagcgggggcaactcaacctggcgtgggagggggcaatgctggcagc
aagctggcaccccaggaggctagtgctgccagtaatggtgcgagccggcctgccctaatg
gtcagcatcgacctgcagcaagcaggtagagctgacgggcagccagaggtaaacataggc
acccacacccctgccctgaggagctggcctgaggaacgcctgtgtcctggggacggcccc
gactccactggagtcctgcggctaaactccaagacagaaggagacacactacagactgca
gacgtccggccagaggtcatcaagcagcgtgccgacacccccaagaagctgggccccgac
gtccgcccagagacccccaaacacaagcacgaaaacagacgagactcgtccaaacatcga
cacgatggcaaacctgacaacagcaaggcccgccctgacgccaggatgcctgacaagccg
cgacaacggcacgagggtcgctcagactctggtcacagggaggacaggtcccgggacagt
gacccatcccgcatccgcaggccagagacccccagcaaatccagcaggggggaacatgac
tccaaacatggacgggacagagacagggagcggggggataaagacagggagaggaaacac
aggacagaggcaggggatccacgggaccgaagatctccagagcagcgctccaggccagag
agcccgcgggttaagcaggaaggccgagggggggtggaccacagtgggcgccagaggact
gaccggccaggccccaacctcaaatcccccaataaagaggagaggaggagcggggaggag
aggaggagtggggacggcagcaggaaccgacaggactctaagcagcaacctgttgaaaac
aagcaggagttccctgcttacctgctggggggcgtaaagtctggaggctttaagaacttt
gtgattcccaaagtgaagcgggataaggatgggcatgtgttggcagctgagatgaggaag
cctggtctgggttctgtagtggagggctggaaggagccccgggtcaagctggagcgactg
gggctggtagagaagatgaagacagcagccaaaccggttgtggtgctgcagaaactcagc
atcgacgaggtgcagaaaatcatcagggagaggaaagatagaagcgcacgcagctccaag
tcctccaagagcagaccctctcattggatctctgagaaagagtccaccatgccactgtgt
gagagggtgaagatgaacaaacgcaagcgcagcaccatcaaggagaagcccaagtacgcc
gaggtcaactcagatgatgacgatgacgacgacgactctgtgacggagtctatgcggaag
cgtcacaagaaggagcgggaaaagacatgggagcctgatgagcgagagaggagaggctca
gggcgcagggggtccggcagccgccaccgtgaacgcagcccagaggattcagacgatgaa
tccccaccgcccagcatgagtgaccttgtcagaaagatgaagaagaaggagaaacagaag
aaaagaaaggcatacgagcccaagctgacagcagaagaactgatggactcctccacgttc
aagaggttctcagccagtgtggacaacattctggagagcttggaggacattgacttcaat
gccatggatgacgatgagatcccacaggagcttctgctggggaaacaccagctgagtgaa
ctggccagcgaatctgctaagatcaaggccatgggcatcaccttcaggctttcatctggt
aagttggtgaaggtcctgaacatcctggagaaaaacattcaggacgggtccaaactctcc
acactgatgaaccacgacgcagacgcagaagacgaggagcgactgtggcgtgacctcatc
atggagcgcgtgacaaagtcagctgacgcctgtctgactgccctcaacatcatgacgtcg
gcccgcatgcccaaggcggtgtacatcgaggatgtgattgagagggtgctgcagtacacc
aagtttcacctgcaaaacaccctctaccctcagtatgaccctgtctacagagtggaccct
cacggaggtggcttgctgagctccagggctaagagagccaaaagctccacacacaagcaa
agggtgatcatcatgctctacaacaaggtgtgtgacatcgtcagcaacatctctgagctc
ctggagatacagctgttgactgacaccaccatcctgcaggtctcctccatgggcatcact
ccattctttgtggagagtgtcagtgagctacagctgtgtgccatcaaactagtgactgcg
gtgttctctcgctatgaaaaacacaggcagctcatcctggaagagatcttcacctctctg
gccagactacccaccagcaaacgcagcctcaggaacttcaggctgaacagcagtgataag
gatggggagcccatgtacatccagatggtaacagctctggtgcttcagcttatccaatgt
gtggtgcacctcccgaacaacagggacagccacgacgagtatgataagaaggtggaccaa
gatgtcctgatcacaaactcttatgagacggcaatgcgagcagctcagaacttcctgtcc
gtcttcctaaagaagtgtggcagtaagcagggagaggaggactatcgcccactgtttgaa
aactttgtccaggacctgctgtctacggtgaacaaaccagagtggccagctgctgagctt
ctcctcagtctgctgggtcgtctactggtgcatcagtttagcaataagcagacagagatg
gctctgagggtggcatcgctagactacctgggcaccgtcgctgcccgcctgcgcaaagac
ggcgtcaccagcaagatggaccagcgctccatcgaccgcatcctcagagagactcaaggc
aatgatgagacccagcagctgcagaaggccctgttggactacatggatgagaacgcagag
acggatccatctctagtttttgccaggaagttctacatcgcccagtggtttagggacact
ttgacagagatggagaaggccatgaagtctcagaaccagcgaggggacgaggactcttct
gaaggccagcaccacgccaaggacatcgagaccaccggagagatcatgcagagagccgag
gcacgcaagaagtacctccgcaacattatcaagactgcgccctcgcagttcagcacactg
aggatgaactctgacactgtggactatgatgactcctgcctgattgtcagatatttggcc
tctatgaggccattcgctcagagcttcgatatttatttaacacagatcctgagagtgctg
ggggagagtgccatagctgtcagaactaaagccatgaagtgtttgtctgaggtggtggct
gtagaccccagtattctggccaggttggacatgcagcgcggggtccatggtcgtctgatg
gacaactccaccagtgtacgcgaggctgctgtggagctgctggggcgttttgtgctgagc
agaccccagctcacagagcagtactacgacatgctgatcgagaggatactggacacgggt
ataagtgtgaggaagagggtgattaagatccttagagacatctgtctggagcaacccacc
ttcaacaagatcactgagatgtgtgtcaagatgatccgcagggtcaatgacgaggagggc
atcaagaaacttgtgaacgagaccttccagaaactctggttcacccctacacctaatcac
gataaagacgccatgacccgcaagatcctcaacatcacagacgtggtgtctgcatgcaaa
gatacaggctatgactggtttgagcagctgcttcaaaacctgctgaagaccgaggaagat
gccgcctataagccagccagaaaggcctgcgttcagctggtggacaatctagtggaacac
atcctaaaatatgaagagtctctcactgacattgagaacaagggggtgaattccacccgt
ctggtgtcctgcatcaccaccctctttctgttcagtaaaatccgatcccagctgatggtc
aaacatgccatgaccatccagccttatctcaccaccaagtgcaacacccagagtgacttc
atggtgatctgtaacgtggccaagatccttgagctggtgatccctctgatggagcacccc
tctgagaccttcctcaccaccatagaggaagacctgatgaagctcatcatcaaatacggc
atgacggttgtacaacactgtgtgagctgtcttggagctgtggtgaacagggtgactcgc
aactacaagtttgtttgggcttgtttcaaccgttactatggtgccctgaccaagctgaag
acccagcactctgaggactccaacaaccctgttctggctgctaacaaaccggccttgctg
cgctcactgttcactgtgggggcactctgtcgccactttgactttgacgaggaggaattc
aagggccccacaaaggttgtgataaaggagaaagtgatggagcttttgctgtacttcact
aagcatgaagatgaggaagttcagaccaaggccatcattggtctaggcttccagttcatc
cagtacccagggctgatgttcatgcaggatgtgatgagtctgtacaacggcatcctgtcg
gacaggaagagctctgtcaacctaaagatccaggtgctgaagaacctgcagacatacctg
caggaggaagactcgcgcatgcaggaggccgaccaacagtggaagaagctatcgaagcag
gaggacctgaaggagatgggtgacatctcgtcaggtatgagcagctccatcatgcagctg
tacctgaagcaggtgctggaggccttcttccacacacagtccaccgtacgacattttgcc
ctcaacgtcattgccctgacgctcaaccagggcctcatccatcctgtacagtgtgtgccc
tacctgattgccatgggaacggatccagagcccaccatgaggaataaggcagaccagcag
ctggtggagattgataagaaatacagcggcttcatccatatgaaggccgtggcggggatg
aagatgtcctaccaggtgcagcaggctatctggtcagctaagggtacggtgatccggggt
taccggcaggacgagaccacctccgccctctgcgcccacctcttctccatggtccgatcc
aaccggcagcaccgacgagccttcctcatctctctgctcaacttgtttgatgacagctcg
aagatggaggtcaacatgctcctgtacatggcagacaacctagcctgtttcccctaccag
atccaggaggagcctcttttcatcatgcaccacattgacatcaccctgtctgtgtctggc
agcaacctgctgcagtccttcaaggaatcccttctcaaagagccaaggcagcgggagaag
aagccgaaagagaggaagtaccagtcagaggaggagaactcgtcatcgtcgtcgtcatcg
gaggaggaacatcaccgtcacagcatcagctccaacagtagtgacgaggacgacgaggtg
gtccaaaggctcaagaagcccaaacaccgggcccaggcccctgtggagtcagactctgac
tctgacctggaaatggaggacttggacaaggtgatgcagcgtctgcctgacaaccccatc
cccctgttggactttgccaacgcctcacagggaatactactactactggttcttaagcag
catctcaagaacctctacggcttctcggacagtaaaatccaaaagtactctccgacggaa
tcggccaaggtatacgagaaggcggtgaacaggaagggtcacgtgcacttcagccctcac
cagacactggacttcctgacctctgacctggccaacgtagaactcacctacgacatcaag
aggaggatcgtcaaacagtacctagatttcaagttactgatggagcatttggaccctgat
gaagaggatgaggaaggtgaggcgtcagccagcgctaatgccagaaacaaagccatcact
tcattgctgggagggcccagccaccaggaccacaagaaccaccaccaggaccacaagaac
caccaccaggctcctatagagacggacgacgacgagagcgatggagatgagaaaacccca
gtgtcatcacggcggtcgaggaagcacggcgactctgcagaggcatcaggtcacatgaat
gagatgttggccgccagggacgtcatcgccctctgctgccccaagtacaaggaccggccg
cagatcgcccgcatcatccagaagaccaacacgggctacagagtgcaatggatggctggc
tcgtactctggagtctggggcgaggctaagaaacgggacggacgcaaaacggtgccttgg
gtggacactatcaaggagtctgacattatttacaagaaaatcgccttgacgagtgcacac
aagctgacgaacagagtggtgcagactttacggtcactgtactcagcgaaggagggaact
tcctaa
DBGET
integrated database retrieval system
