Salmo trutta (river trout): 115149270
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Entry
115149270 CDS
T08542
Name
(RefSeq) very low-density lipoprotein receptor-like isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115149270
Membrane trafficking [BR:
stru04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
115149270
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
EGF_CA
cEGF
SGL
Motif
Other DBs
NCBI-GeneID:
115149270
NCBI-ProteinID:
XP_029547826
Ensembl:
ENSSTUG00000002627
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Position
15:complement(50927058..50964631)
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AA seq
866 aa
AA seq
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MLTSLLEILILPICLQQCGFVHGSKTECEPSQFQCGNGRCIPSVWQCDGDEDCSDGSDEN
TCVRKTCAEVDFVCRNGQCVPKRWHCDGEPDCEDGSDEHVEVCHTRTCRVNEFSCGAGST
QCIPVFWKCDGEKDCDNGEDEMSCGNITCASLEFTCASGRCISRNFVCNGEDDCGDGSDE
QECAPSSCGPSEFQCGNATCIPGNWVCDDDVDCQDQSDESPQRCGRQPTPPAKCSSSETQ
CGSGECIHRKWRCDGDPDCKDGSDEANCSVRTCRPDQFKCEDGNCIHGSRQCNGLRDCAD
GTDEVNCKNLTQCNGPDKFKCRSGECIEMNKVCNKARDCPDWSDEPIKECNFSFLPHAVS
DLNECLLNNGGCSHICRDMVIGFECDCTPGLQLIDRKTCGDINECMNPGICSQICINLKG
GYKCECHNSYQMDPTTGVCKAVGKEPCLIFTNRRDIRKLGLERREYTQIVEQLRNTVALD
ADFTQQRIFWADLSQRAIFSTVLDKRGDVGSHVKVIDNVTPVGIAVDWIYNNIYWSDLGT
KTIEVANFNGTKRKVLFSSGLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGVDRQVL
VQTDIQWPNGITLDLIKSRLYWVDSKLHMLCSVDLNGNNRRKVLQSPDYLAHPFALTVFE
DRVFWTDGENEAIYGANKFTGSDVITLASNLNEPQDIIVYHELIQLSGTNWCNEKGLNGG
CAYMCLPAPQINKYSPKYTCACPRDQTLASDALHCRPATTVPNVVPKPVPAEANSSTSIH
EVNSTARGSTAAWAILPVLLLAIAAAGGYLMWRNWQLKNKKSMNFDNPVYLKTTEEDLNI
DISRHTSNIGHTYPAISVVNTEDDLS
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgtctcttctggagattcttatcctaccgatatgtcttcaacagtgcggtttt
gtacacggatcaaagacagaatgtgagcccagtcagttccagtgtgggaacggtcgctgc
atcccgtctgtctggcagtgtgacggggatgaggactgctccgacgggagtgacgagaac
acctgtgttcggaagacctgtgcggaggtggactttgtctgtcgtaatggccaatgcgtc
cccaagagatggcactgcgacggagagccagactgtgaggatgggtctgatgagcatgtg
gaagtgtgccacaccaggacctgccgtgtgaatgagtttagctgtggggccgggtccacc
caatgcatccccgtcttctggaagtgtgatggagagaaggactgcgataacggagaggat
gaaatgagctgtggtaacatcacgtgcgcctcgctggagttcacctgtgcgagtggccgc
tgcatctcccgtaacttcgtctgtaacggggaggacgactgtggtgacgggagtgatgag
caggaatgtgctccatcctcctgtggtcccagcgagttccagtgtggcaatgccacctgt
atccctggcaactgggtctgtgacgatgacgtggactgccaggaccaatctgatgagtcc
cctcagcgatgtggtcgccaacccacgccgccggccaaatgttcgtccagcgagacacag
tgtgggtctggggagtgcatccaccgcaagtggcgatgtgacggggacccagactgcaag
gatggcagcgacgaagccaactgttctgttcgtacctgcagaccggaccagttcaagtgt
gaggacggcaactgtatccacggcagcagacagtgcaacggtttgcgtgattgtgcagat
ggcaccgatgaagtcaactgcaaaaacttgacacagtgcaatggccctgacaaattcaag
tgtcggagtggagagtgtatagagatgaataaagtgtgcaacaaggcccgggactgtcca
gactggagcgacgagcccatcaaagagtgcaatttttcttttctgccgcatgctgtttca
gacctgaacgagtgtctactgaacaacggaggctgctcccacatctgcagggacatggtg
attggcttcgagtgtgactgcacccctggactgcagctcatagaccgcaagacctgtgga
gacatcaatgaatgtatgaaccctgggatctgtagtcagatttgtatcaacctgaaggga
ggttataagtgtgagtgccacaacagctaccagatggaccccaccacaggagtgtgcaag
gctgtgggcaaggaaccctgtcttatcttcacaaaccgtcgggacatccggaagctgggt
ctggagcggcgggagtacacccagatcgtggagcagctgcggaacacggtggcactggat
gcagacttcacccagcagaggatcttctgggcagacctgagccagagggccatctttagc
acagtgttggataagagaggagatgtaggaagtcatgtgaaggtgattgataatgtgaca
cctgtggggatcgctgtggactggatctataacaacatctactggtcagacctcggcacc
aagaccattgaagtggccaacttcaatggcaccaagcggaaagttctcttcagcagtggt
ttgaaagagcctgcgtccatcgctgtggatccactctctggattcctctattggtcagac
tggggtgaaccagccaagattgagaagtctggtatgaacggggttgacaggcaggtcctg
gtccagactgatattcagtggcccaatggaatcactctagacctgatcaagagcagactg
tactgggtggactccaagctgcacatgctctgtagcgtggacctgaacggcaacaaccgt
aggaaagtgctgcagtccccagactacctggctcacccctttgcgctcactgtgttcgag
gatcgagtgttctggacagatggggagaacgaggcgatctacggagcaaacaagttcaca
ggctctgatgtgattaccctggcaagcaatctgaacgagccacaggacatcattgtttac
catgagctaatccagctgtccggaacaaactggtgcaatgagaagggtctgaacggaggc
tgtgcctacatgtgcctgccagcgccacagatcaacaaatactcccccaagtacacatgt
gcgtgtccgcgagaccagacgctcgcctcagacgcccttcactgcagaccagcgaccaca
gtgccaaatgttgtccccaaacctgtccctgctgaagccaacagcagtacatccatccat
gaggtgaactccacagctagaggatctacagctgcctgggctatcctccctgtgttgttg
ctggccattgctgcagcaggaggctacttgatgtggcgtaactggcagctgaagaataaa
aagagcatgaacttcgacaatccagtgtacctgaaaaccacagaagaggacctcaacatt
gatatcagcaggcacacctccaatataggccacacatacccagcaatatcagtggtgaat
acagaagatgacttgtcataa
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