Salmo trutta (river trout): 115149435
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Entry
115149435 CDS
T08542
Name
(RefSeq) RAB6A-GEF complex partner protein 1-like isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115149435
Membrane trafficking [BR:
stru04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
115149435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
115149435
NCBI-ProteinID:
XP_029548146
Ensembl:
ENSSTUG00000012066
LinkDB
All DBs
Position
15:57478382..57572553
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AA seq
1420 aa
AA seq
DB search
MYFLTGWPRRLLCPLKSEEQPFHVQPSSQRFYFAVLSETQLSVWFSRPSVLIVSYIESAK
ASSQFGFYQQAEWKQDDSMIAVAAANGYILLFDVVGGGEDKYLYEPVYSKGRRGVKVTPG
YKEEQCAPALSLEMKRPMDLEAPITSMLSLQEDLLVSTADGYLHILHWDGISNGRKAISL
CSVPFSLDLQSARGGLCLDLKGVYIRDMTYCVTLDGFAVVLNDGRLGFITPLANRITADQ
LQGVWAADVTDGTCVAVNNKYRLVTFGCASGSVLVYSIDTTTGSMQLSHKLELSPKHYPD
VWNKTGAVKLIRWSPDYSVAMVTWECGGLSLWSVFGAHLICTLGEDFAYRSDGSKKDPIN
ISSMSWGAEGYHLWVITSREETELVENMEEAPAQTQQAGILQFHFIKSALTVNPCTSNQE
QVLLHGEDRLYLTCGDPAQLPSSSSESPHPHNLPHGGEGSPSSNSTSQGLSTLLGYKHWH
VVQIHSTYLESNWPIRFAAIDTAGQCIAVAGRRGFAHYSMSTRKWKLFGNITQEQNMTVT
GGLVWWKGFVVVACYNFIDRQEELRLYLRSSNLDNTFSSITKLHSETLLLNVFRDMIILF
RADCSICLYSMERRHDGPNPSASVELLQEVSMSRYIPHPALVVSVTLTSVRTETGITLKA
PQQACMADSIILNLAGQLIMLQRDRSGPQLQEKLPFCPPVVLAQYVENVWTTCRSNRKKG
HLLEALWLSCGEAGMKVWLPLFPRDHRKPHSFLSRRIMLPFHINIYPLAVLFEDALVLGA
SNETVLYDSLQGPREGRESLEGLFPYCTVERTSQIYLHHILRQLLVRNLGEQALLLAQSC
AALPYFPHVMELMVHVVLEEEATSREPIPDPLLPTVAKFITEFPLFLQTIVHCARKTEFA
LWNYLFAAVGNPKDLFEECLMAQDLDTAASYLIILQNMEVPAVSRQHATLLFNTALEQGK
WDLCRHMIRFLKAIGSGEMETPPPTPTTQEPSSTGGFDLFRNRSISLSQSADSIAAGKFN
LTKTFSMPSGPSAKGSDRWSKDSDCAENMYIDMMLRRHARHLLEHVRLKELGCFSAQLGF
ELIGWLCHERTRVARVDDFVMALKCLHKDFLWPFPVIPAGSISSPFKNGHRRTVLSQHLL
KSQSADSLLNMDTAPPQAVARNSNHTWLDRLGALGPTEMDTALSHGGPQTQEAFLSPLTN
KTEECSIGSATDLTETSSMVDGDWTMVDDNFSTLSLTHSELEHISRELANKGPHKSQVQL
RYLLHVFMEAGCLEWCVVIGLILRETTVIKQVVNFLDSPEVPPETVQSVRSGLLGVDAWA
STDCLGYKPFLNMIRPQLQKLIETSVEQIQPEAFLPGASNSKLAEPQPAGPSAEDSRGPV
LLGLALPLEPPGGLGTEDGGVPEEQEEQAVDEGAYDCTLS
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgtattttttaactggctggcctcggaggctactttgtccactgaaaagtgaagaacaa
ccgtttcatgttcagcccagttcccagaggttttacttcgctgtattgtccgagactcaa
ctaagcgtctggtttagtcggcccagtgttctgatagtgagctacatagagtcggcgaaa
gcatcatcccagtttggcttctatcagcaggccgaatggaagcaggacgattccatgata
gcagtagcggctgccaatggctacatcctcctgtttgatgtggtgggaggaggagaggac
aagtatctttatgagcccgtctattccaaagggaggaggggtgttaaggtcaccccaggt
tataaagaggagcagtgtgcccccgctctcagcctggagatgaagagacccatggatctg
gaggctcccatcaccagcatgctgtctcttcaggaagatctgttggtgtctactgctgat
ggctacctacacatcctccactgggatggaatcagcaacggcaggaaggccatcagtctc
tgtagcgtccccttctccctggacctacagtctgccagaggtggtctgtgtctggacctg
aagggggtgtacatcagagacatgacctactgtgtgactctggatggctttgctgtggtg
ctgaatgatggcaggctggggttcatcactcctctagccaacaggatcactgcagatcag
ctgcagggcgtctgggcagcagatgtaacagacggcacgtgtgtggctgtcaacaataag
tacagactggtgaccttcggctgtgccagtggctcagtgttggtgtacagtatcgacacc
actacagggtccatgcagctctcccacaagctggagctctctcctaaacactaccctgac
gtgtggaacaagacgggtgcggtgaagctgatccgctggtcccctgactacagtgttgcc
atggtgacctgggagtgcgggggactgtctctgtggagtgtgtttggagcccacctcatc
tgtaccctgggggaggactttgcgtatcggtcagacggcagtaaaaaggaccctataaat
atcagctcaatgtcctggggagcggagggctaccacctgtgggtcatcaccagcagagag
gagacggagctggtggagaacatggaggaggctcccgcccagacccagcaggctggcata
ctgcagttccacttcatcaagagcgccctcacggtcaacccctgcacgagtaaccaagag
caggtgttacttcacggggaggaccgtctctacctaacctgtggtgaccccgcccagctc
ccctctagcagctcagagagcccccacccccataacctcccccacggcggggagggcagc
ccctcatccaactccacctctcagggactcagcactttactgggatacaagcactggcac
gtggtccagattcacagtacatacctagagagcaactggcctatacggtttgcggccata
gacacagcaggccagtgtatagctgtagcagggagacgtggatttgcacattactccatg
tccaccaggaaatggaagctgtttgggaacatcactcaggagcagaacatgaccgtgaca
ggagggctggtctggtggaaaggctttgttgttgttgcctgttacaatttcatcgaccgg
caagaagagctacgtctgtacctgcggtcgtctaacctggataataccttctcctccatc
accaagctgcactctgagactctgctgcttaacgtgttcagagacatgatcatcctcttc
agagcagactgctccatctgcctctacagcatggagaggagacacgacgggcctaatcca
tcagctagtgttgagctgcttcaggaggtgtccatgtctcgctacattcctcatcctgcc
ctggtggtgtctgtcaccctcacctccgtacgcacagagaccggcatcacgctcaaagcc
ccacagcaggcctgtatggcagacagcatcatactgaacctggcaggccagctcatcatg
ctacagagagatcgttctggaccccagctacaggagaagctgccgttctgtcctccagtg
gttctggcccagtatgtagagaatgtgtggacgacgtgtcgtagtaacaggaagaagggt
cacctactcgaggctctgtggctgtcgtgtggagaggctgggatgaaggtgtggctcccc
ttgttccctcgtgaccatcgtaagccccactccttcctgtcccgccgcatcatgctcccc
ttccacatcaacatctaccccctggctgtgctgtttgaagatgctctggttctgggagct
tccaacgagactgtgctgtatgacagcctgcagggtcccagagagggccgggagtcctta
gaggggttgttcccctactgcacggtggagaggacttcccagatctacctccaccacatc
ctgaggcaactcctggtccgtaacctgggggagcaggcccttctcctggcccagtcctgc
gccgcgctcccctacttcccccacgtcatggagctcatggtccacgtggtgctggaggag
gaggccacctcccgggagcccatccccgacccgctgctgcccaccgtggccaagttcatc
accgagttccccctgttcctccagaccatcgtgcactgcgccaggaagaccgagtttgcc
ctgtggaactacctgtttgctgccgtgggcaaccccaaggatctgtttgaggaatgtctg
atggctcaggacctggacactgctgcatcctatctcattatactgcagaacatggaagtt
ccagcagtgagcaggcaacacgctacgctactcttcaacacagctctggagcagggcaag
tgggacctctgtcgtcacatgatccgattcctcaaggccattggctctggggagatggag
accccacccccaacaccaaccactcaggaacccagttcgacaggaggttttgacttattc
aggaatcgcagcatcagtctgtctcagtcagctgacagcatcgctgctgggaagtttaac
ctaacgaagaccttcagcatgccctctgggccctctgctaaggggtctgacaggtggtct
aaggacagtgactgtgcagagaacatgtacatagacatgatgttgaggcgtcatgcccgc
cacctccttgagcacgtcagactaaaagagctgggttgtttctctgcccagctgggcttc
gagctgattggctggctgtgccacgagcgcacgcgggtggcgcgggttgatgactttgtc
atggcgctgaagtgtctccacaaggacttcctgtggccgtttcctgtcatcccagccggc
tccatcagctcgcctttcaagaacggacaccgcaggacagtgctgagccagcacctactg
aagtcccagtcagcagacagcctgttgaacatggacacagcgcccccgcaggccgtagca
cgcaacagcaaccacacctggctagacaggctgggggctcttggacctacagagatggac
actgccttgtcccacggggggccacagacacaggaggccttcctctctccactaaccaac
aaaacggaggagtgcagcatcggttctgccacagacctgacagagaccagcagcatggtg
gatggagattggaccatggtggatgacaacttctctactctcagtctgacccactctgag
ctggaacacatctccagggagctggctaacaagggaccacacaagtcccaggtccagcta
cggtacctcctgcatgtgttcatggaggctggctgtctggagtggtgtgttgtgattggt
ctgatcctgagagagaccacagtcatcaagcaggtggtcaacttcctggacagtcctgag
gttcctcctgagaccgtccagagtgtccgctccggcctgctaggggtcgacgcatgggcc
tccacagactgcctgggctataagcccttcctgaacatgatccggccccagctacagaag
ctcatagagacttctgtagagcagatccagcctgaagccttcctaccaggggcttccaac
tcgaagctggctgagccccagcccgcaggccccagtgcggaagacagtagagggcctgtc
ctcctgggtctggcccttcctttggagccccctggggggttagggacagaggacggagga
gttccagaggagcaggaggaacaggcggtggacgagggggcgtacgactgcactctgtcc
tga
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