Salmo trutta (river trout): 115149445
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Entry
115149445 CDS
T08542
Name
(RefSeq) UV excision repair protein RAD23 homolog B-like
KO
K10839
UV excision repair protein RAD23
Organism
stru
Salmo trutta (river trout)
Pathway
stru03420
Nucleotide excision repair
stru04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115149445
09124 Replication and repair
03420 Nucleotide excision repair
115149445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
stru03051
]
115149445
03400 DNA repair and recombination proteins [BR:
stru03400
]
115149445
Proteasome [BR:
stru03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
115149445
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
115149445
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Crinkler
Rad60-SLD_2
UBA_3
CUE
Ubiquitin_4
Dsc3_N
UBA_2
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
115149445
NCBI-ProteinID:
XP_029548168
Ensembl:
ENSSTUG00000013936
UniProt:
A0A673YDB3
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Position
15:58135315..58158941
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AA seq
375 aa
AA seq
DB search
MQITLKTLQQQTFKIDIDEEETVKTLKERIENEKGNDGFPVAGQKLIYAGKILNDDTAIK
DYKIDEKNFVVVMVAKPKAAPAAAQPSGSAATTTSSTTAPTVPTAASPGSDNPPEGSKPA
EERPCNTSAPASTPTSSSGLLTNVNMFEEATSALVTGQSYENMVTEMMLMGYEREQVVSA
LRASFNNPDRAVEYLLTGIPAGEESHAGADPVVPSVGGGTPALNTGSMTTPASVATGANP
LGFLVNQPQFLQMRRIIQQNPSLLPALLQQIGRENPQLLQQISSHQEQFIQMLNEPAQEG
GQGGEGGGGGGGVGVGGEAGSGMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNE
NLAANFLLQQNFDDD
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcactttgaaaaccctccagcagcagacatttaaaatcgacatagacgaagag
gagacggtaaaaaccttaaaggaaagaattgagaatgagaagggaaacgatggttttccg
gttgcagggcagaaattgatatatgcagggaaaatcctaaatgatgacactgctatcaag
gactataagattgatgagaagaactttgtggttgtcatggtggcaaagcctaaagcagcc
ccagcagctgcccagccttccggttctgccgccaccaccacctcgagcactacagccccc
acagtacccactgctgcctcgccaggctcagataacccaccagaggggtccaaaccagcc
gaggagaggccctgcaacacttcagccccagcatcaacccccaccagttcctctggtcta
ttgacaaatgtgaacatgttcgaggaggcaacttctgctctggtgacaggccaatcgtat
gagaacatggtgacagagatgatgctgatgggctacgagagggagcaggtagtgtcagcg
ctcagagccagcttcaacaacccagacagagctgtagagtacctgcttacagggatccca
gctggggaggagagccatgcaggtgctgacccagtggtgccctctgtgggcggaggaact
ccagctctcaacacaggcagcatgacgacccccgccagtgttgcaacaggagccaaccct
ctggggttcctggttaaccagcctcagttcctccagatgagacggatcatccagcagaac
ccctctctgctccctgccttactacagcagatagggagggagaacccccagcttctgcaa
caaatcagcagccaccaagagcagttcatccagatgctgaacgagccagcccaggagggg
ggacagggtggtgaaggtggtggtggtggtggtggagtgggggttggtggggaggctgga
agtggcatgaactacatccaggtcacaccccaggagaaggaggccattgagcggctaaaa
gctctaggattcccggaaggacttgttatacaggcctactttgcctgtgagaagaacgag
aacttggctgctaacttccttttacaacagaactttgacgacgactaa
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