Salmo trutta (river trout): 115149491
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Entry
115149491 CDS
T08542
Symbol
aff1
Name
(RefSeq) AF4/FMR2 family member 1 isoform X1
KO
K15184
AF4/FMR2 family member 1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115149491 (aff1)
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
115149491 (aff1)
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Paralog
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
115149491
NCBI-ProteinID:
XP_029548281
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All DBs
Position
15:60995539..61071765
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AA seq
1163 aa
AA seq
DB search
MAARSSYNEERNLLRIRERERRNQGTFQEKEFYQETVPLFGEPYKTNKGDELSSRIQRML
GSYEDVNNPNTHQCLDSFSKDPQSHVTTKYGRPSRSRDRAKPPFQNPPQYGASQSQSGGP
PRGSHSGQPLKKIQGPSSSYTQSSLGLSQGQACPDPHQRKTELWPDLRECASLPPVLSAL
SPPAEPLSPLHSSDPSDSEHQDSPLHPERHPASPLHPDSHFPMVSPLDDPQRDIPPPAIE
GTTLPSQTFPPPLASKPNLVMPQKPTAYVRPMDGQDQVTSESPDLKPSPEDFHGQSYHEP
LPDLKSTKPSLSKLKIPSQSIECCAAFQTPSNEADCVEDILREMTHSWPPLLTAIQTPST
VEPSKFSFPVKEAQHVPPASPGQKHYGSPPLDPPSICQQSSGTVTAAHSSGVESASSSDS
ESSSGSESGSESSESGTEAPPQPLRSSSPPVTKTEGPVVTNWQLNNWIRVSQQNPSTENQ
SDTLLSPLHKQQQSHEEEAIPPRDYKSHTPPHRPEFSDGEAKPQRSEAAAHNQHVQHKSP
AASHVGNSSSSSQRKTVGNKHPSRPAKATRPEDPQAGLQVESVEVVPRDKDSSFTDRPKV
KTKTGHSSSKSSGAKTNNRKPAKRGASEKKTEQPESQGGPKVTLVLDCKREKSPSPSPAQ
EVDQPAPAVVKTTSVRTETLPAPQKGQKKPRRHSLDPAHKAKRESSAKASRVRQGPTRAL
LVKIELSLLSRVPSQGSRPPSGGQEPAIRKGPNTAPERGDTNPAAPIPTKVCKKRPAEKD
VKTVPRKKPKLQNDLKPSSSGPGSRKSETEKKRSKGALLQPTTTQDPGKGQGGHKRHEVD
APEPSTASATHRRDREASTPVKHKKSTGKQRTEHAKKAPKSSVAFSIPSQPTRAALSSRP
LLQFEDRQQPVEYHMKEAKTLKHKADATPDKVGKAFNYLDAAMSFVESGIAMETDPQTPK
SAYTMFAETLDLIRFILKLKGSVNPSAPATDKDFTVLCMRGLSLLQMAMFRYKREAALKY
SRTLTDHFKSSLKSAAQAPSPCVSKSTGTPSPMSPMPSPASTASSGPGSNHSSSGAGAGT
VSTVAIPQVIQQVASSYVNITALFLSAHDIWEQADELAHKGSGLLSELDLALGPLSLTST
MSSLVRHTRQGLQWLRLDTRETQ
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcgctcaagctacaatgaagagaggaacctccttcgcatccgagagcgggag
cggcggaatcagggaaccttccaggagaaggagttctaccaggagaccgttcccctgttt
ggggaaccctataagacgaacaaaggagatgagctgtccagccgtatccagaggatgctg
ggtagttatgaagacgtgaacaatcccaacactcaccagtgtttggacagcttctctaag
gaccctcaatctcacgtcaccacaaagtatgggcggccatctcgcagccgagaccgagcg
aagcctccattccagaaccctcctcagtacggggcaagccagagccagagtggtggtcct
ccccgtggcagccactctggccagcctctgaagaagatccagggtccttcctcctcctac
acccagtcctccctgggtctcagccagggccaggcctgcccagacccacaccagagaaag
actgagctctggccagacctgagggagtgtgccagtcttcctccagtcctctctgccctg
tcccccccagccgagcccctatcccccctacattccagtgaccccagcgactctgaacac
caggactcccccctgcaccctgagaggcacccggcctctcccctacaccccgactcgcac
ttccccatggtgtcccccctggatgacccccagagagacatcccgcctccggccatcgag
gggacaaccctgccctctcagaccttccctccaccgctggcctccaaacccaacctggtt
atgccccagaagcccacagcctacgtccggcccatggacggccaagaccaggtgaccagc
gagtctccggacctcaagccctccccagaagacttccatgggcagtcttatcatgaacct
ttaccagacttgaaaagcaccaagcccagcctttccaaactgaagataccatcacagtct
atagagtgttgtgctgccttccagacgccgtcaaatgaagctgactgtgtggaagacatt
ctgagggaaatgacccactcttggcctcctctcctgactgccatccagacacccagcaca
gttgagccctccaagttctccttcccagtcaaggaagcacagcatgtcccacctgcatct
ccaggacaaaaacactatggatcacctccactagacccgccctccatctgtcaacagagc
tcaggtacggttacagcagcacattccagtggggtggagtcagccagctccagtgactct
gagagcagctcagggtcggagtcaggcagtgagagcagtgagagtgggacagaggccccg
ccacagcccctcaggagtagcagcccacctgtgacaaagacggagggccccgtggtgact
aactggcagttgaacaactggatccgagtgagccagcagaaccccagcacagagaaccag
agtgacactctactgagccctctacacaaacagcagcagagccatgaggaggaggccatt
cctcccagggactacaaatcccacacacccccacatcgcccagagttcagtgacggtgaa
gccaaacctcaacgcagtgaagccgctgcccacaaccagcatgtccaacacaagtccccg
gccgcctcgcacgttgggaacagcagcagcagcagccagagaaagacagtggggaacaaa
cacccctccagaccagccaaggctacccgccctgaagaccctcaggctgggttacaggtg
gagagtgtggaggtggtcccccgtgacaaagactcctcgttcacagacaggccaaaggtc
aaaacgaaaaccggccacagcagtagcaagagcagcggagccaaaacaaacaacaggaag
cctgccaagcgtggcgcctctgagaagaagaccgaacaaccagagtcacagggtggcccc
aaggtgactctggtgctggactgtaagagggagaagtctcctagtcccagccctgcccag
gaggtagaccagccagccccagctgtggtgaagaccaccagtgtcaggacagagaccctc
ccggcccctcagaagggccaaaagaagccccggcgccactctctagacccagcacacaaa
gccaagcgggagtcctcagccaaagcttccagggtccgccaggggccaacacgggccctg
ctggtaaagatagaactgagcctgctgtccagggtgccctcccagggctccaggcctcct
tcagggggccaggagccagccatcaggaagggacccaacacggccccagagaggggggac
accaaccctgctgcccccatccctaccaaagtctgcaagaagagaccggctgagaaggat
gtgaaaaccgtgccaaggaagaagccaaagctgcagaatgatcttaaaccctcctcttca
ggtcctggttcccgcaagtctgagactgagaagaagcggtccaagggggctctgctgcag
cccactaccactcaggaccctgggaaagggcaggggggccacaaacggcacgaggtggat
gccccagagccgagcacagcatctgcaacccaccgcagggacagggaggcctccacaccg
gtcaagcacaagaagagcactggaaaacaacgcacagagcatgccaagaaagcccccaag
agcagcgttgccttctccataccttcccagcccaccagggctgccctgtcctccagaccc
ctgctccagtttgaagacaggcagcagccagtggagtatcatatgaaggaagccaaaaca
ctcaagcacaaagcagatgccacgccggataaggtgggcaaagctttcaactacctagat
gctgccatgtccttcgtggagagcggcatcgctatggaaaccgatccccagaccccgaag
tcggcatatacgatgttcgctgaaaccttggatctgatcaggttcatactgaaactaaag
ggctctgtcaacccctcggcccctgctacagacaaggactttacagttttatgtatgagg
ggcctgtcccttctacagatggccatgtttcgctacaaacgagaagcagcacttaagtat
tcaaggaccctcacagatcatttcaagagttccttaaagtctgcagcccaggctccttca
ccatgtgtctcaaaaagcacgggtaccccatcccccatgtctcccatgccatctcctgcc
agcacagccagttctgggccgggctccaaccacagcagcagcggggcgggggcaggcacc
gtcagcaccgtggccattccacaggtcatccagcaggtggcgtcttcctacgtcaacatc
acggcactcttcctgagtgctcacgacatctgggagcaggctgacgagctggcccacaaa
ggcagtggtttgctgtctgagttggacttggctctgggcccgttgagcctgacgtccacc
atgagctctctggtacgtcacacacggcagggactgcagtggctccgactggacacccgc
gagacacagtga
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