Salmo trutta (river trout): 115149572
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Entry
115149572 CDS
T08542
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
stru04054
]
115149572
Pattern recognition receptors [BR:
stru04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
115149572
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
PRY
NOD2_WH
LRR_6
SPRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
LRR_4
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
TRAF3_RING
zf-RING_6
DUF6011
zf-rbx1
Prok-RING_4
zf-Nse
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
115149572
NCBI-ProteinID:
XP_029548388
LinkDB
All DBs
Position
15:complement(1977801..1994533)
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AA seq
1063 aa
AA seq
DB search
MHPIEFREGDFSTEQSGWSTLPEDQSRCAVCQQVLRDPVSITCGHRFCRQCITRYWEKPA
PSGDYDCPQCRKRSRTRPVLQHLSEPNDARGFEKLDDSLQRAIVNHKDSLKRRYECVIEG
IETAGNQTPLNRIYTELYITEGESEGVNNEHEVWQLETAPRTPTSHDTVIHCNDIFKPLP
GQERSIRTVLTKGIAGIGKTVSVQKFILDWAEGKANQDVDIIFVLPFRELNLIKDRQYSF
LRLLNDFHTELDIGNAKKLTACKAMFIFDGLDESRLPLDFQHNENVSDVTQTSSVDVLLT
NLIKGNLLPSALLWITSRPAATNQIPPQCVDQVTEVRGFNDPQKEEYFRKRFSDEDLASR
IISHIKTSRSLHIMCHIPVFCWISAIVLEHMLKHKREEMPTTLTEMFTLFVLIQTSLKNQ
KYHGRDEMDQEELMESHKEVLLKLGKLAFENLEKGNLMFYEEDLNVCGIDVKEASLYSGV
CTHIFKEESVLFQRVVYCFVHLSIQEFLSAVYMYHCYTSKNMDALKPFFKRKSEELTLHE
LLKSTVDKALESKNGHLDLFVRFLHGMSVESNQKLLRGLVTQTESSPESVQKTIRSLKVM
QRKNISPERWINLFHCLIEMKEHSVQEEIQEYLRSEKRSINLTLAQCSALAYMLQISEEV
LDVFDLKEYKTTQEGRRRLLPAVRCRRKALLNGCKLTDTSCEVLASVLSSNSSYLRELDL
SNNDLKDSGVKLISAGLGNPHCRLETLRLTGCKLTDTSCEVLASVLSSNSSYLRELDLSN
NDLKDSGVKLLSAGLGNPHCKLETLRLSGCLVTEEGCASLVSALRSNPSHLRELDLSYNH
PGDSGVRLLSAGLEDPHCRLEKLNVKPDGVLTIKPWLRKYVCDLTLDPNTVNRLLSLSEE
NRKVTCRREEQPYPDHPERFEDCEQVLCREGLTGRCYWEAEWSGRGAYIGVTYKGISRRG
GVNDCCLGYNDKSWCLDCSDNSYTVWHNNNPTTIDVPSSSSHRVGVYLDWPAGTLTFYRA
SSDTLTHLITFTTTFTEPLYPGFRLWYDTSVSLCQVVPVSNTT
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgcatcctatagagtttagagagggagacttttctactgaacaaagtggatggtctact
ctgccagaggatcagtccaggtgtgcagtgtgccagcaggttctgagggatccagtctct
atcacctgtggacacaggttctgcagacagtgcatcaccagatactgggagaaacctgct
ccttcaggagactatgactgtcctcagtgtagaaagagatccagaacacgtcctgtacta
cagcacctgagtgaacccaatgatgcaagaggctttgaaaaattggatgacagcctgcag
agagctatagtaaaccataaagacagtctgaaaaggaggtatgaatgtgtgatagaaggc
atcgaaacagcagggaaccaaactcccctcaacaggatttacacagagctctacatcaca
gaaggcgagagtgaaggggttaacaatgaacatgaggtgtggcagctagagacagcaccc
aggacaccaacctcacatgacacagtaatccactgcaatgacatctttaaacccttaccc
ggccaagagagaagcatcagaactgtgctgacgaagggcatcgctggcatcggaaaaaca
gtctctgtgcagaagttcatcctagactgggctgaagggaaggcaaaccaagatgtggat
atcatatttgtacttcctttccgggagctgaacttgatcaaagatcgccagtacagtttt
ctcagacttttaaatgacttccacacagaactagacataggcaatgcaaagaaactcact
gcctgtaaagctatgttcatctttgatggtttggatgaaagcagacttccattggatttc
cagcacaatgaaaatgtgtctgatgtcacccagacatcatctgtagatgttctgctgaca
aacctcatcaagggaaatctgcttccctctgctctcctctggataacgtcccgaccagca
gcaactaatcagatcccccctcagtgtgttgaccaggtgacagaggtacgagggttcaat
gacccacagaaggaggagtacttcaggaagagattcagtgatgaggacctggccagcaga
atcatctcacacataaagacatcaaggagcctccacatcatgtgccacattccagtcttc
tgttggatttctgcaatagtccttgaacacatgttgaaacataagagagaagagatgccc
acgactctgactgagatgttcacactcttcgtgctcattcagaccagcctgaagaaccag
aagtatcatggaagagatgagatggatcaagaggagctcatggagtcacataaggaagtt
cttttgaagctggggaagctggcgtttgaaaatctggagaagggtaatctcatgttctat
gaagaagacctgaacgtgtgcggcattgatgtcaaagaagcatcactgtactcaggagtg
tgcacacacatctttaaagaagagtctgtgttatttcagagagtggtgtactgctttgta
catctaagcattcaggagtttctctcagctgtctacatgtaccattgttacacaagcaag
aacatggatgcactgaagcccttcttcaagagaaagtctgaagagctaaccttgcatgag
ctgctgaagagtaccgtggataaagccttggagagtaagaatggacacctggaccttttt
gtccgcttccttcatggcatgtcagtggagtccaatcagaaactcctacgaggtctggtg
acacagacagaaagcagtccagagagcgtccagaaaacaatccgatcccttaaggtgatg
cagaggaagaacatctcccctgagaggtggattaatctcttccactgtctgatagagatg
aaagaacattcagtacaggaggaaatccaagagtacttgaggtcagagaaaagatcgata
aacctcacacttgctcagtgttcagcgctggcctacatgctgcagatatcagaggaggtt
ctggatgtgtttgacctaaaagaatacaagacaacacaggagggtcgtaggagactgctc
ccagctgtgaggtgccgcagaaaggctctactcaatggctgtaaactcacagacacatcc
tgtgaagttttggcctcagttctcagctcaaactcctcatatctgagagagctggacctg
agtaacaatgacctgaaggattcaggagtgaagctgatctctgctggactggggaatccc
cactgcagactggagactctgagactcactggttgtaaactcacagacacatcctgtgaa
gttttggcctcagttctcagctcaaactcctcatatctgagagagctggatctgagtaac
aatgacctgaaggattcaggagtgaagctgctctctgctggactggggaatccccactgt
aaactggagactctcaggctgtcaggctgtttagttacagaggaaggctgtgcttctctg
gtctcagctctgaggtcaaacccctcacacctgagagagctggacctgagctacaatcac
ccaggagactcaggagtcagactgctctctgctggactggaggatccacactgcagactg
gagaaactcaatgtgaaacctgatggagtgttaacaatcaaaccatggcttagaaaatat
gtctgtgatctcacactggacccaaacacagtaaacagactcctctctctgtctgaggag
aacagaaaggtgacatgtaggagagaggagcagccgtatcctgatcacccagagagattt
gaggactgtgaacaggtgctgtgtagagagggtctgactgggcgctgttactgggaggca
gagtggagtgggagaggggcttacataggagtgacatataaaggaatcagcaggagagga
ggggttaatgactgttgtcttggatacaatgacaagtcctggtgtctggactgctctgac
aacagttacacggtttggcacaataataatcccactaccatagacgtcccctcctccagc
tcccacagagtaggagtgtatctggactggccagccggcactctgaccttctatagagcc
tcctctgacacactgacccacctgatcacattcaccaccacattcactgagcccctctat
ccagggtttaggctttggtatgacacctcagtgtccctgtgtcaggtggtccctgtgtca
aacacaacatga
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