Salmo trutta (river trout): 115149633
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Entry
115149633 CDS
T08542
Name
(RefSeq) rho guanine nucleotide exchange factor 12
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
stru
Salmo trutta (river trout)
Pathway
stru04270
Vascular smooth muscle contraction
stru04625
C-type lectin receptor signaling pathway
stru04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
115149633
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
115149633
09153 Circulatory system
04270 Vascular smooth muscle contraction
115149633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115149633
Membrane trafficking [BR:
stru04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115149633
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
115149633
NCBI-ProteinID:
XP_029548444
UniProt:
A0A673XD58
LinkDB
All DBs
Position
15:complement(20936931..21075412)
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AA seq
1497 aa
AA seq
DB search
MSETQSTLTDRVPKKATRTLSILSKDHPPDKKPKSEKNTVPPLHEFDPTGLVQRCVIIQK
DENGFGLTVSGDNPVFVQLVKEDGSAMRAGVQTGDRIIKVNGSLVTHSNHVEVVKLIKSG
SYVALTVLGRPPGLAQIPLSEGEVGDPGVLSSSLSSPHSPGTMGGTGKRCSTSTSPQDHI
SPLPLWEENNAVHSQKVDILQKMLSKEQQDLQAMKDEYSRNPTAKLLKDIQEAKKHIPLL
HGQLRKATGTPQDGSLSPWDGEGGGVGVADGEQTPSSQVESGSNGTWTNNTVSPSPLPES
PCQREIPCHSPKTTPRDSLNSCPSPDAEDTPDLNCNFQCSVGSPLSRLNPQIIGAEDDYF
DTEQEEINGQCCCFQSIELLKSRPAHLAAFLHHVVSQFDPAPLLCYLYAELYKQTNSKET
RRIFMDFYTFFMDRAANLKVAVPESIASELDRRRPELIPEELHRQYTQLLQDTLLPDIQG
NLEDFRQKRSMGLTLAEGELAKLDTERVRDRVALDRERSCAEHIISKIEDVLLTSQPTEE
EKCTTMQYVILTYMKHLGVKVKEPRSLEPKRVRINFLPKIKKSIKTEKEGEEKVKKPRFP
SILGPPRRPSRVDSTSIGKAIEMNKQRGPQKQLSQPILSIPDHPESSARGNQSRDPGSDV
ATHPSAFITSPPHSAPASQGSDPMGRDSDSGLTPSSALPRLSSDWLHSSDTQDRMTHPTS
THFDFSPCTLDQLQEEERESDGVQEGGTPKPARRMQGLGCAGVPNEDDLGNEIECKQDSP
NWQTLVSREVLAGLTPQEIKRQEVINELFYTERAHLRMLKVLDNVFYQKLTRDSILPPGD
IKHIFTNLEEIVQLHVSITEQVTVIRKKNETSVIDLIGDDLLAWFSDGEEEKIKRAVGTF
CSNQPFALELIKTRQKKDQRFTSFMQEAESNRLCRRLQLKDIIPVEMQRLTKYPLLLESI
AKYTEDAAERDKVKRAGECCRKILNYVNQTVKEAENKQRLEDYQRRLDLSSLKQSENPMI
SEFKSLDLTKRKMVHEGPLSWKVNKDKTIELYTLLLEDILVLLQKQDERLVLKCHSKNLA
GTADTKHIFSPIIKLNTVLVRSVATDNKSFFVLSMSDNGAQIYELMAQTVSEQRTWQCLI
TQRADTMKTKPHNIIPLPQTDAERDAVEVISTGIPKLSKDPDRLSTGSIQFAEKYVTSSP
GLQATPTSINPFDSIKSDDKEEELPLLLDRREEEEEVDEEEVEAFLVGELADRLPLLQER
SCQGIAIDDQEPHDAFVMPPSRAEEALRTLAALRQVLLNHMTSREEGSNKNNENKKEKEQ
RKGLAHGARLLRTTSLRGPEDSNSSISGPRSAAASSPGSSENGTSERTEAGREEGAPGSS
ELPSGDIVLRCLEEAYGSYIVLGGSGESSTDDDGQASGKGGGGAQWDSDSGIDLKKLLSS
SSQTGDAGPNLSRQVMTHIRLLQANLQHLKEVEAKYNELRQRLSETATDTEENKDES
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagacacagtcaacactcactgacagggttcccaaaaaagcaaccaggaccctt
agcattctcagcaaggaccaccccccagacaagaaacccaagagtgaaaaaaacacagtc
ccacctctgcatgagtttgacccgacagggcttgtccagcgttgtgtgatcatccagaaa
gatgagaatggctttgggctgacggtgagcggagacaaccctgtatttgtgcagctggtc
aaagaggatggctctgccatgcgagcgggcgtccagacgggtgataggatcatcaaggtc
aacgggagcttagtaacacattcaaaccatgtagaagtcgtaaagttaatcaaatcgggc
tcctatgtggccctcacagtgctggggaggcccccgggactggctcaaatccccctgtca
gagggcgaggttggagacccaggggtcctgtcgtcgtccctctcctcaccccactctccg
ggaacaatggggggaacagggaagcgctgctccacctccaccagtccccaggaccacatc
tccccgctgcccctctgggaggagaataacgctgtacacagccagaaggtggacatctta
cagaagatgctgtccaaggagcagcaggacttacaggctatgaaagatgagtacagcagg
aaccccacagcgaaactactgaaggacatccaggaggccaagaaacacattcctctgctg
catggccagctcagaaaggccacaggcacacctcaggatggctccctctccccctgggac
ggtgagggggggggcgttggggtggctgatggagagcagaccccctcctcgcaggtagag
agcggcagcaacggaacctggaccaataacactgtgtctcccagtcccctccctgagagt
ccgtgccaaagagagatcccctgccatagcccaaagaccaccccccgagacagcctcaac
tcctgcccctcgcctgacgccgaggacacgccggacttgaactgtaacttccagtgtagt
gtgggcagccccttgtcccgtctcaacccccagatcatcggagcggaggatgactacttt
gacaccgagcaggaagagatcaatggtcagtgttgttgtttccagagtatagagctgctc
aagtctcggcccgctcacctggccgccttcctccatcacgtggtctctcagtttgaccct
gcacctctgctgtgctacctttacgctgaactgtacaagcagaccaactccaaagagacc
agacggatcttcatggatttctatactttctttatggaccgagcagcgaatctgaaagta
gctgtgcctgagtctattgcctctgaactagatcggcggagacctgagctgatcccagag
gagctacacagacagtacacacagctgctacaggacacactgctaccagacatccagggg
aacctagaggacttcaggcagaagcgcagcatgggcctgaccttggcagagggggagctg
gctaaactggacacagagagggtgagagaccgcgtggcgctggatagagaacgctcctgt
gccgaacacatcatctccaagatagaggacgtcttgctgacgtcacagcccacagaagag
gagaagtgcactactatgcagtatgttatcctcacgtatatgaaacacctgggagttaaa
gtgaaggaacctcgtagcctagagcccaaacgagtccgcatcaacttcctgcccaagatc
aagaagagcatcaaaactgagaaagagggggaggagaaggtgaagaagcctcgttttccc
agcatcctcggccctcctcgtcggcccagccgtgtggactccacttcaatcggcaaggcc
atagagatgaacaagcagcggggcccccagaaacagctctcgcagcccatcttaagcatc
cccgatcacccagaatcctcggcccgcggcaaccaatcaagggatccaggctcggatgtg
gccacccacccctcggccttcatcacttcacccccacacagtgccccagccagccagggc
tccgaccccatgggacgcgattctgactcgggtctcactccctcctccgccctgcccagg
ttgagctctgactggctccactcgagcgacacccaggacaggatgacccacccaaccagc
acccactttgacttcagcccctgcaccctggaccaattgcaggaggaggagcgtgagagt
gacggagttcaagagggaggcacacccaaaccagcccggaggatgcagggtttaggctgt
gcaggtgtgccaaatgaggacgacctggggaatgagatcgagtgcaagcaggactctccc
aactggcagacgctagtcagccgagaggtcctggcgggcctgacgccacaggagatcaag
agacaggaagtcatcaacgagctgttctacacagagcgagcccacctgaggatgttgaag
gtgctggacaacgtgttctaccagaaactaacccgagacagcatcctgcctcctggagac
attaaacacatcttcactaacctagaggagattgtccagctacatgtgtcgataacagaa
caggtgacagtcattcggaagaagaacgagacgtcagtgatagacctgataggagacgat
ctactagcttggttcagtgatggcgaggaggagaagatcaagcgggcggtgggcaccttc
tgcagtaaccagcccttcgccctggaactcatcaagacccggcagaagaaggaccagcgc
ttcacctcctttatgcaggaggctgagagcaaccgtctgtgtcgcagactgcagctgaag
gatatcattccagtggagatgcagaggctgaccaagtatccgctactgctggagagcata
gcaaagtacacagaggatgcagcggagagggacaaggtgaagagggccggggagtgctgc
aggaagatcctcaactatgtcaaccagacagtgaaagaggcagagaacaaacagaggtta
gaggactaccaaagacgcctggacctgtcctcactcaaacagagtgagaacccaatgatc
tcagagttcaagagcctggacctgaccaagaggaagatggtgcacgagggacctctctcc
tggaaggtcaacaaagacaagacaatcgagctgtacacgctgctcctggaggacatcctg
gtgctgctgcagaagcaggacgagcggttggtcctcaagtgccacagcaagaacctggcg
ggcaccgccgacaccaagcacatctttagccccatcatcaagctcaacacagtgctggtg
cgctccgtggccaccgacaacaagtccttcttcgtgctgtccatgtctgacaatggagcc
cagatctacgagctaatggcccagaccgtgtccgagcaaagaacgtggcagtgtctgata
acgcagagggcagacaccatgaagacgaagccgcacaacatcatacctttacctcagacc
gatgctgagcgagacgcagtggaggtgataagcacagggatacccaaactgagcaaagac
ccagaccgcctttccacgggaagtatccagttcgcagaaaaatatgtcacttcctcgcct
ggtctgcaagccacgcccacatcaatcaacccattcgacagcatcaaatcagacgataag
gaagaagagttgccgctactgctagacagaagagaagaagaggaggaggtagacgaggag
gaagttgaagcgtttctggttggagagctggcagacagactgcccttactccaggagagg
tcatgccaaggcattgccatcgatgaccaggagccccatgacgccttcgtcatgcccccc
tccagagccgaggaggccctaagaaccttggcagccctgaggcaggtccttctcaaccac
atgacaagcagagaggagggcagcaacaagaacaatgagaataagaaggagaaggagcag
aggaagggcttggcccatggcgcccgcctgctgaggaccacgtcactgaggggcccagag
gacagcaacagcagtatatcgggccctaggagcgcagcagcatcctctcctggttcctcg
gagaacggcacctcggagaggaccgaggcggggagggaggagggggccccaggatcctcg
gaactcccgtctggggacatagtcctcagatgtctcgaagaagcctacggcagttacatt
gtcctggggggctcgggggagagcagcacagacgacgatggtcaggcgagtggcaagggt
ggaggcggggcccagtgggactcggactcgggcatcgacctgaagaagctgctctcctca
tcctcgcagacaggggatgctggccccaacctcagccgccaggtcatgacccacatccgc
ctgctgcaggccaacctgcagcacttgaaggaagtggaagccaagtataatgaactgcgc
caaaggctgagtgaaacagctactgacacagaggagaacaaagatgagagttag
DBGET
integrated database retrieval system
