Salmo trutta (river trout): 115149830
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Entry
115149830 CDS
T08542
Symbol
fen1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03030
DNA replication
stru03410
Base excision repair
stru03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115149830 (fen1)
03410 Base excision repair
115149830 (fen1)
03450 Non-homologous end-joining
115149830 (fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stru03032
]
115149830 (fen1)
03400 DNA repair and recombination proteins [BR:
stru03400
]
115149830 (fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115149830 (fen1)
DNA replication proteins [BR:
stru03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
115149830 (fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
115149830 (fen1)
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
115149830 (fen1)
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115149830 (fen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-GeneID:
115149830
NCBI-ProteinID:
XP_029548511
Ensembl:
ENSSTUG00000010887
LinkDB
All DBs
Position
2:complement(7586375..7591446)
Genome browser
AA seq
380 aa
AA seq
DB search
MGIHGLAKLIADQAPSAIKEQDIKNYFGRKIAIDASMCMYQFLVAVRQDGNVLQNENGET
TSHLMGMFYRTIRMLEHGIKPVYVFDGKPPELKSGELEKRGERRAEAEKLLAQAQEAGEQ
ENIDKFSKRLVKVTRQHNDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKVFATATEDM
DGLTFGTGVLLRHLTASEAKKLPIQEFQFTRLLQDINLTHEQFIDLCILLGCDYCGTIKG
IGPKRAIDLIRQHGSIEEILENIDSSKHPAPEDWLYKEARGLFLQPDVVDCSTVDLKWSE
PDEDALIQFMCAEKQFSEDRIKNGCKKILKSRQGSTQGRLDTFFTITGSLSSKRKEPETK
GSNKKKQKTGATPGKFKKGK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggaattcacgggcttgcaaagttgattgcagaccaggcaccatctgctataaaggaa
caagacatcaagaactactttgggcggaagatagcaatagacgcctccatgtgtatgtat
cagttccttgtcgctgtcagacaggatggtaatgtgctccaaaacgagaatggggagacc
acaagccatctcatgggcatgttctaccggactatccgcatgctggagcacgggatcaag
cctgtctatgtgtttgatggcaagcccccagagctgaagtcaggagagctggagaagaga
ggagagaggagggctgaggctgagaaactgctggcccaggcacaggaagcaggggagcag
gagaacattgataagttcagtaaacgtctggtgaaagtcacccggcaacacaatgacgag
tgcaagaagctgctcaccctgatgggggtgccatacatcgaggctccgtgtgaggccgag
gcgagctgtgctgctctggttaaggctgggaaggtgtttgccactgcaacagaggatatg
gatggtctgacttttggaacaggggtcctactaaggcacctcactgccagcgaagccaaa
aagcttcctatccaggagttccagttcactcgccttctgcaggacattaatctgacccat
gagcagttcatagacctgtgcatactgctgggctgtgactactgtggtaccatcaaggga
atcgggcccaagagagccattgacttgatcagacaacacggctccatcgaggagattctg
gagaacatcgactcgtctaagcaccctgccccagaggactggctgtataaggaagccaga
gggctgttcctgcagcctgacgtggtggactgctccaccgtagacctcaagtggagcgag
cctgacgaggacgccctgatccagttcatgtgtgcagagaaacagttcagtgaggaccgc
atcaagaacggctgtaagaagattctgaagagccgacagggcagcacacagggacgactg
gacaccttcttcaccatcacagggtctctgtcatcaaaacgcaaggaacctgagacaaag
ggatccaacaagaagaaacagaagaccggagcaaccccaggcaaatttaagaagggcaaa
tag
DBGET
integrated database retrieval system