Salmo trutta (river trout): 115149895
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Entry
115149895 CDS
T08542
Symbol
gdf5
Name
(RefSeq) growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
stru
Salmo trutta (river trout)
Pathway
stru04060
Cytokine-cytokine receptor interaction
stru04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115149895 (gdf5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115149895 (gdf5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
stru04052
]
115149895 (gdf5)
Cytokines and neuropeptides [BR:
stru04052
]
Cytokines
Transforming growth factors (RSTK binding)
115149895 (gdf5)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
115149895
NCBI-ProteinID:
XP_029548552
Ensembl:
ENSSTUG00000034615
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Position
16:57674597..57678528
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AA seq
538 aa
AA seq
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MKVLKSVPLLLGCWTLLYLDFIPASLSHTSIAECAPESGGKEHTGGAGEGANPGIGSTAR
SMLGNYGAGGWKSLSAARITRIRTGPPLIKGEAAKAKAVTSVSSPHSVTVSRARGAVNLG
PKEAVRYWVLAGDATKAAAAPAPVALSMQTGKGSGRPGQSKGNTVPRAATSARTGQQNVV
DVQKHIARLAQMSGKATGKLNGRYSPKLLLVTPHDYMLSLYWSLSTGGVNTSVLHEAGMA
NTITSFVDKGQDARIPQLRRQKYYFNISSLEKEGLLGAELRILRKRLADPHKALSTDRVF
CLKLFTCVAGKQKATLLQTQTIKDHNSPKWEVFDIWKLFKNFKNTVQLCFELEGLERGRP
VDLRALGFSRLGRQTKEKAFFLIFGRTKKNDLFYNEIKARSGHDNKTVYEYLFTQRRMRR
APTTRGKKLAKNPKPRCHRKQLHVNFKEMGWDDWIIAPLEYEAYHCDGVCDFPIRSHLEP
TNHAIIQTLMNSMDPDSTPPTCCVPTRLSPISILYIDSANNVVYKQYEDMVVESCGCR
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtactgaaaagtgtccctcttttattggggtgttggactctcttatacctggac
tttattccagcgtcactgagccataccagcattgcagagtgcgcacccgagagcggaggc
aaagagcacacaggcggagcaggtgaaggagccaacccgggaattggctcaactgccagg
tcgatgttaggaaactacggcgcagggggttggaagtctctaagtgctgcgaggatcacg
cgcattagaacaggacccccgctgataaagggcgaggcagccaaagcgaaagctgtgaca
tcagtgtcatcaccgcacagcgtaacggtcagccgtgctcgtggagctgtcaatttgggg
cccaaggaggctgtgcgctattgggtactcgccggggatgctactaaagcagcagctgcg
cctgctccggtggcgctgagcatgcaaacaggcaaaggctcaggcaggcctggacagagc
aaaggaaacactgtccccagagctgcaacatcagcccgaactggacagcaaaatgtcgtt
gatgtgcaaaagcacatcgctcggttggcccaaatgagcggcaaagcaacgggcaaactt
aacggaagatactctccaaagctcctattggtaactccgcatgactacatgttgtcactg
tattggtcactatccacaggaggggtgaacactagtgtgctgcacgaggctggcatggcc
aacaccatcacaagctttgtggataaaggacaagatgcccgtattccccagctgagaaga
cagaagtattacttcaacatcagttccctggagaaggaggggttactgggtgccgagctg
cgtatactcaggaaaagactggctgatccacacaaagcactttccactgacagagttttc
tgcctgaagcttttcacttgtgtagcaggtaagcagaaagctacactgctccaaactcaa
accatcaaggaccacaattcgcccaaatgggaagtgtttgacatttggaaactattcaag
aatttcaagaacaccgtccagctttgcttcgagctggagggtttagaacggggacgcccc
gtggacctcagggcactgggcttcagtcgtctgggcaggcaaaccaaagagaaggccttt
ttcctcatttttgggcgcacaaagaaaaatgacttattctacaatgagatcaaagctcgg
tcgggccatgacaacaagactgtgtacgaatacctgttcactcagcggcgcatgcgccga
gctccaaccacccgcggcaagaagctggccaagaaccccaagcctcgttgccacaggaag
cagctgcacgtcaacttcaaggagatgggctgggatgattggatcatcgccccactagaa
tatgaggcctaccactgcgacggggtgtgtgacttccctattcgctcgcacctcgagccc
accaaccacgccatcatccagacgctcatgaactccatggaccccgactcgactccgccc
acctgctgcgtgcccactcgcctcagcccaatcagcatcctctacattgactctgccaat
aatgtggtctacaaacagtatgaggacatggtggtggagtcctgtggctgcaggtag
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