Salmo trutta (river trout): 115149972
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Entry
115149972 CDS
T08542
Symbol
poc1a
Name
(RefSeq) POC1 centriolar protein homolog A
KO
K16482
centriolar protein POC1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115149972 (poc1a)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
stru03037
]
115149972 (poc1a)
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
115149972 (poc1a)
Cilium and associated proteins [BR:
stru03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
115149972 (poc1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_Gbeta
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_WDR75_1st
DSE1_N
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_WDR41
CFAP251_N
Beta-prop_IFT140_1st
Beta-prop_NOL10_N
Beta-prop_SPT8
Beta-prop_Vps41
ASA1
Beta-prop_RIG_2nd
Ge1_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_Nup120_160
Tricorn_2nd
PAC11
Beta-prop_DCAF4
Beta-prop_WDR75_2nd
PROPPIN
RMC1_N
PD40
Beta-prop_ACSF4
BCAS3_WD40
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
Beta-prop_DCAF12
Beta-prop_IP5PC_F
Beta-prop_IFT122_2nd
Nucleoporin_N
Tricorn_N
Beta-prop_At4g14310
Beta-prop_RIG_1st
SHKBP1_KCTD3_C
Motif
Other DBs
NCBI-GeneID:
115149972
NCBI-ProteinID:
XP_029548673
LinkDB
All DBs
Position
16:3588134..3681863
Genome browser
AA seq
479 aa
AA seq
DB search
MTSALDDPTLERHFKGHRDTITSVDFNCNMKQIATGSMDSCLMIWNLKSQMRAYRFVGHK
DAVTSVQFSPSGHLVASASRDKTVRLWVPSVKGESTVFRAHTGTVRSVSFSGDGQTLVTA
SDDKTLKVWTVHRQKFLFSLNQHINWVRCAKFSPDGRLIVSASDDKSIKIWDKNSQECIH
SFYEHGGYVNYTDFHPSGTCIAAASTDNTVKVWDIRTNKLLQHYQVHSGVVNGLSFHPSG
NYLITASNDSTMKILDLLEGRLLYTLHGHQGPVACVTFSRTGDYFASGGSDEQVMVWKTN
FKTADYGEVLRLQQTATCVDLGGGGAAGGGGGGGGAAFTGDSRNSLLHRQEPSESELCNG
QERGGLRTEVRSRSGSFTRSLSSRPTQTSRAPRARPSSVQQTRTQPETQTHAQREGMVPA
GLASTLEHIVAQLDVLTQTVAILEQRLTLTEDKLKECIDNQHQINLQLHRREPDLQPSD
NT seq
1132 nt
NT seq
+upstream
nt +downstream
nt
atgacttccgcattggatgacccaaccctggagaggcacttcaagggccacagagacacc
ataacaagcgttgacttcaactgtaacatgaaacaaattgcgaccggctccatggactcc
tgtctcatgatctggaacttgaagtcccaaatgagagcctatcggtttgtgggacataaa
gacgctgtgacgtcagtccagttctctccctccggacatctggtggcctcagcttccagg
gacaagactgtccgcctctgggtgcccagtgttaagggcgagtccacagtgttccgagcc
cacaccggaacggtccgcagtgtcagtttctccggtgacggacagaccttggtcaccgcc
tccgacgacaaaactctcaaagtttggaccgttcacagacagaaattccttttctctctc
aaccaacacatcaactgggtccgctgtgccaagttttcaccagacggcaggttgatcgta
tcggccagtgacgacaagagcattaagatctgggacaagaacagtcaggagtgtatccac
tcattctatgaacatggagggtatgtgaactacactgacttccaccccagtggaacgtgc
attgctgcagcaagcacagacaacactgtcaaggtctgggacatcaggaccaacaaatta
ctgcagcattaccaagttcacagcggagtggtgaacggtctttccttccatccatctggt
aactacctgattacagcctctaatgactccactatgaagatactggacctcctggaggga
cggctgctctacacactgcacggacaccagggcccagtcgcatgtgtaacgttttccagg
accggagactactttgcctcaggaggatctgatgaacaggttatggtgtggaagactaat
tttaaaacagctgactatggagaagttctacgactgcagcagacagcgacctgcgtcgac
cttggaggaggaggagctgcaggaggagggggaggaggaggaggagactgtggccatcct
agaacagaggctgactctgacagaggacaagctgaaggagtgtattgacaaccagcatca
gatcaacctgcaactccaccgcagggaaccagacctccaaccaagtgactaa
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integrated database retrieval system
