Salmo trutta (river trout): 115150023
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Entry
115150023 CDS
T08542
Symbol
rbm15b
Name
(RefSeq) putative RNA-binding protein 15B
KO
K13190
RNA-binding protein 15
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115150023 (rbm15b)
03041 Spliceosome [BR:
stru03041
]
115150023 (rbm15b)
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
115150023 (rbm15b)
Spliceosome [BR:
stru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115150023 (rbm15b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
115150023
NCBI-ProteinID:
XP_029548747
LinkDB
All DBs
Position
16:complement(7879970..7885011)
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AA seq
851 aa
AA seq
DB search
MKRQAGRDSSPSRALAKRIRERERERDGARREDILPPPLALLLAESRRQHARSRSREREK
TRLREERGAAGDPLHHRQQHHDLGLIGRPVLRTTAALPKGKAATELLGPRGGAGGTLEYK
SLLISNLGSVLSDEHVEDGLFHEFKKFGDVSVKLSHTPELGRVAYVNFRHPEDAKEARHA
KTRLVLYDRPLKVEPMYVRRRSCTPPDVSYIPIHGASYPPYRQRSLSPGAGVSSIRDIRP
LRHYPVEGLGLSRERERILDYYGMLDERGRPYGLPVPEHEDIKPEDDARACRNLFIGNLD
HNVTEGELRRGFDKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKIAMQGRVIGGN
PVKIGYGKANPTTRLWVGGLGPSNSLAALAREFDRFGSIRNIDYVKGDNFAYIQYESLDA
SQAACAQMRGFPLGGPERRLRVDFAKAEEPLPRSYPVGYQPPVPLPAHLDLLPEGYGGRH
RDCSLERELRARDRSPPSHALFTQRERERALLDRDRGDREFTSPTKSLERRGGEAFGGSR
GGRGDRAARSRSRERWLKERDAARAGGERRRRRSLSLDRPSQEKERGRSKVRGGGPASPE
DSPDRARVRAPDSTTEPRGQSPDSSRHSNEDRGGGLKTGGDREKERDRDRNHRNASDNNH
TLSDMPNKDPKTLSTLSEYAATLTKAWHGHFALKNSCFPTNMHLLEGGSGFFHSVMKDHQ
AKGKLTQLKIAQRLRMDQTRLDEVTRRIKQGGSEGYAVLLALQGPIDREAPPPEPGLQIR
LLRHLVTYLRNKEAAGVISLPVGGAKEGGKGGMLYAFPPCDFSQQFLQTPRRTLESLDEE
HLVVVIVNDSA
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgacaggccgggagggactccagtcctagtcgggctttagcgaaacgaatacgg
gaaagagagcgggaacgagacggggcgcggagagaggacatactgcccccgcctcttgcc
ttgctgctcgctgaaagccgaaggcaacatgctcggagcaggagtagggaacgagaaaag
acacggcttcgggaggaacgcggggccgctggagacccacttcaccaccgacaacaacac
cacgacctcggtctgatcggccgccccgttctccggactacagccgccctgcctaaaggc
aaagcggcgaccgagctactgggcccccgggggggagcgggggggactctggaatataaa
tcgttgctcattagcaatctaggctcggtgctttctgacgaacatgttgaagacggactg
ttccacgagtttaaaaagttcggggacgttagtgtgaaactatctcacactccagagctg
ggccgtgttgcctacgtgaatttccgtcacccggaagacgctaaagaggccaggcatgcc
aagaccaggttagtgctgtatgatcgcccccttaaagtagagcccatgtacgtccgtcgt
cgcagctgcacgccgccggatgtgagctacattcccattcatggcgcctcatatccccct
tatagacagaggtccctctccccaggggcaggagttagcagtatcagagacatccgacca
ctgagacactaccctgtagaggggttgggactgagcagagagagggagaggatcttggat
tactacgggatgttggatgagagagggcggccatacgggctgccagtacccgagcacgaa
gacataaagccagaggacgacgcgcgggcgtgtaggaacctgttcattggcaacctggat
cataacgtcaccgagggcgagctgaggagaggctttgataagtacggcatcattgaggaa
gttgtgattaaacgaccggcgcgcggacaggggggagcttacgctttcctcaagttccag
aatttagacatggctcaccgggccaagatagccatgcagggccgcgtgatcggtgggaac
ccggtgaagattggctatggtaaagccaaccccaccacgagactctgggtaggtggcctc
ggccctagcaactccctagcagcactagcccgtgagtttgaccgcttcggcagcatccga
aacatagactatgtgaaaggggacaattttgcctatattcagtatgaaagcttggacgcc
tcccaggccgcctgtgcccagatgagaggtttccccctgggaggcccagagcggaggctg
agggtggactttgccaaggcggaagagccccttcctcgtagctacccggtggggtaccag
ccccctgtgcccctgcctgcccacctggacctgctgccagagggttacggcgggaggcac
cgcgactgcagcctggagagagagcttcgtgccagggaccgttcgcccccctcccacgcc
ctgttcacccagcgggagagagagagggctctgctggacagggacaggggagacagagag
ttcaccagcccaaccaagagcctggagcgtagggggggtgaagcatttgggggatcccgt
ggagggcggggggaccgagcagcccggagccgtagccgagagcgctggctgaaggagagg
gacgcagcgcgggctgggggggagagacggagacgccgcagtctctccctagacaggccc
tctcaggagaaggagagaggcaggtccaaggtgaggggaggaggaccagcctctccagag
gacagcccagacagagccagggtcagagccccagactccaccaccgagcccaggggacag
agccctgacagcagccgccactccaacgaggaccggggtgggggactgaagaccggtggg
gacagggaaaaggaacgagaccgtgaccgcaaccacagaaacgcgagcgacaacaaccac
accttgtctgacatgcctaataaagaccctaagacactcagcacgctgtcggagtatgcc
gccaccctcaccaaagcctggcacggtcacttcgccctgaagaactcctgcttccccact
aacatgcacctgctagagggaggctccgggttcttccactctgtcatgaaggaccaccag
gccaaggggaaactgacccagctgaagatcgcccagcgactgaggatggaccagaccagg
ctggacgaggtcaccaggaggatcaagcagggtgggtccgagggctacgctgttctcctg
gccctccagggccccatcgaccgcgaggcccctccgcctgaaccaggtctacagatcaga
ctcctccgtcacctggtcacctacctgaggaacaaggaggctgcaggagtgatcagtcta
cctgtaggcggggctaaggaggggggaaaggggggcatgctgtatgccttccccccctgt
gacttctcccagcagttcctccagacccctcgcagaactttggagagtctggatgaagag
cacctggtggttgtgattgtcaatgactctgcctaa
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