Salmo trutta (river trout): 115150098
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Entry
115150098 CDS
T08542
Symbol
ddx27
Name
(RefSeq) putative ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115150098 (ddx27)
03009 Ribosome biogenesis [BR:
stru03009
]
115150098 (ddx27)
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115150098 (ddx27)
Spliceosome [BR:
stru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
115150098 (ddx27)
Ribosome biogenesis [BR:
stru03009
]
Eukaryotic type
Pre-60S particles
Helicases
115150098 (ddx27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
PRK
Motif
Other DBs
NCBI-GeneID:
115150098
NCBI-ProteinID:
XP_029548881
UniProt:
A0A674BAU6
LinkDB
All DBs
Position
16:11652680..11666352
Genome browser
AA seq
774 aa
AA seq
DB search
MLSDLDLVGTIQDHDDVPEETDSESNDEDEQPIVLNKKKKTLKGHGAGDFSADFEFGERD
GLYSEDWAMADVMAQLKKRKAPTTLDEKIEKVRKKRKTEEKAKTTEKTEIPSEDAEEEDD
EDEEEEEEDEKPDIAEDGAEVSNDEDQSDDDGEEFTSGDEEVLTKADTVRDKGRKKTKAE
EPPEAFFEDASNYDDKLMFPDMNLSRPILKAITAMGFKQPTPIQKACVPVGLLGKDICAC
AATGTGKTAAFMLPVLERLIYKPKQAAVTRVLVLVPTRELGIQVHAVARQLAQFTSITTC
LAVGGLDLKSQEVALRMGPDVLIATPGRLIDHLHNTPSFELSQIEILILDEADRMLDEYF
EEQMKEIIRMCAYQRQTMLFSATMSEEVKDLASVSLKQPVRIFVNSNTDVAPYLRQEFVR
IRPAREGDREAIVAALLTRTFQDHVMLFTQTKKQAHRMHILLGLMGLKVGELHGNLSQTQ
RLESLRRFKDEQIDILVATDVAARGLDIDGVKTVINFTMPNTVKHYVHRVGRTARAGKVG
RSVSLVGETERKMLKDIVRKAKTPVKARVLPQEVILKFRDLIEKLEKDVYAVMRLEREER
AMSHSEAQISVAQKRLAQNADETDPQRTWFQTHDERKKDRMTKALADFDLALRGKKKREK
FIKEGKKKVLSSEDRAEFEILKSQMYAERAAKRDRKPKRARAMPEDEPVQKGAKQKAGKP
AKKSVFDKELTNTSKKALKQYRAGPSFEDKKRLGIPTNKKGGGGFKSKAKFRRK
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcagatttggacctggtcgggacaattcaggaccatgacgatgttcccgaggag
actgattcagagtctaacgacgaagacgaacagccaatagttctcaacaagaagaagaaa
acgttgaagggccatggtgctggagacttcagcgctgactttgagtttggagagagggat
ggactctacagcgaggactgggctatggcagatgtgatggcacagctgaagaagaggaaa
gcccccaccaccttggatgaaaagattgagaaagtacgcaagaaacgcaaaacagaggag
aaggcaaagacgacagaaaaaacagagattccctcagaggacgctgaagaggaagatgac
gaagatgaggaggaggaggaagaagatgagaaacctgatatcgctgaagatggggctgag
gtatccaatgacgaagaccagagtgatgatgatggggaggagtttacatcaggggatgaa
gaggttctcaccaaagcagatacggtgagggacaaaggtagaaagaagacaaaggcagaa
gagcctccagaggccttctttgaagatgcctcaaactatgatgacaaactcatgtttccc
gacatgaacctctccaggcctattcttaaggctatcactgccatgggcttcaagcagccc
actcccatccagaaggcctgtgtacctgtggggcttctgggcaaagacatctgtgcctgc
gctgctaccggcactggtaagacggcagcgttcatgcttcctgtgctggagcgtctcatc
tacaagcccaaacaggcagcggtgacccgtgtgctagtcctggtgcccacgcgtgagctg
ggcatccaggtgcacgccgtggcccgccagctggcccagttcacaagcatcaccacctgc
ctggctgtggggggtctggacctcaaatcccaggaggtggcattgcggatgggccctgac
gtcctgatcgccacgccaggtcgactgattgaccacctgcacaacacgccctcttttgag
ctcagccagattgagatcctcatcctggacgaggctgaccggatgctggacgagtacttt
gaggagcagatgaaggagatcatcaggatgtgtgcctaccagagacagaccatgctcttc
tctgccaccatgagcgaagaggtgaaagacttggcgtcggtctctctgaagcagccggtt
cgtatctttgtgaacagtaacacagacgtggcgccctacctcagacaggagtttgtcagg
atcagaccagccagggaaggagacagggaggctattgtggccgccctgctgacacggacc
ttccaggaccatgtgatgctgttcacccagaccaagaagcaggcccaccggatgcacatc
ctcctgggcctgatggggctgaaggtgggagagctgcacgggaacctgtcccagacccag
agactggagagcctcaggcggttcaaagatgaacagattgacatccttgtggccacagat
gttgcggctagaggtctggatatcgatggcgtgaagacggtgattaacttcaccatgccc
aacacagtgaagcactacgtccacagggtgggccgcacggcccgtgccggcaaggtcggt
cgctctgtgtccctggtgggcgagactgagaggaagatgctaaaggacatcgtcaggaag
gccaagacccccgtgaaggcccgcgtcctgccacaagaggtgattctgaagttcagagac
ctgattgagaagctggagaaggatgtgtacgccgtgatgcgtctggagagagaggagagg
gccatgtctcactcagaggctcagatcagcgtggcacagaagcggctggcacagaacgca
gacgagacggatccccagaggacgtggttccaaacgcacgacgagcgcaaaaaagaccgc
atgaccaaagcgctggctgactttgacttggccctgagaggaaagaagaagagagagaag
ttcatcaaggaggggaaaaagaaagtgttatcgtctgaggatagagcagagtttgagatc
ctcaagtcccagatgtacgctgagcgagcagccaagagggaccggaaacccaaacgagcc
agggccatgccagaggacgagcctgtccagaaaggtgcgaaacagaaagctggtaaacca
gccaagaagtctgtgtttgacaaagaacttacaaacaccagtaagaaagcactcaagcag
tacagagctggaccctcctttgaggataagaagaggcttggaattccaacgaacaagaaa
ggaggcggcggcttcaagtccaaggccaagtttaggagaaagtaa
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